Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.01□□□□□ -0.17
CCNA2P20248 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.01□□□□□ -0.17
CCNA2P20248 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCNA2P20248 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14□□□□□ -0.17
CCNA2P20248 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCNA2P20248 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CCNA2P20248 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCNA2P20248 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 AC131212.3-201ENST00000624087 4219 ntBASIC14□□□□□ -0.17
CCNA2P20248 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCNA2P20248 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14□□□□□ -0.17
CCNA2P20248 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CCNA2P20248 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CCNA2P20248 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 AC236430.1-201ENST00000402231 743 ntBASIC14□□□□□ -0.17
CCNA2P20248 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14□□□□□ -0.17
CCNA2P20248 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14□□□□□ -0.17
CCNA2P20248 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14□□□□□ -0.17
CCNA2P20248 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 RN7SL399P-201ENST00000471648 279 ntBASIC14□□□□□ -0.17
CCNA2P20248 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14□□□□□ -0.17
CCNA2P20248 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14□□□□□ -0.17
CCNA2P20248 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14□□□□□ -0.17
CCNA2P20248 LINC02560-201ENST00000596379 459 ntBASIC14□□□□□ -0.17
CCNA2P20248 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14□□□□□ -0.17
CCNA2P20248 AC055811.4-201ENST00000624039 1754 ntBASIC14□□□□□ -0.17
CCNA2P20248 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CCNA2P20248 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCNA2P20248 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCNA2P20248 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14□□□□□ -0.17
CCNA2P20248 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14□□□□□ -0.17
CCNA2P20248 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.99□□□□□ -0.17
CCNA2P20248 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CCNA2P20248 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.99□□□□□ -0.17
CCNA2P20248 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.99□□□□□ -0.17
CCNA2P20248 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.99□□□□□ -0.17
CCNA2P20248 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.99□□□□□ -0.17
CCNA2P20248 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCNA2P20248 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCNA2P20248 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.99□□□□□ -0.17
CCNA2P20248 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.99□□□□□ -0.17
CCNA2P20248 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNA2P20248 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms