RNA–Protein interactions for RNA: ENST00000606227.1

AL359643.2-201, humanhuman

TSL 2 BASIC

Gene AL359643.2, Length 3,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL359643.2-201ENST00000606227 NISCHQ9Y2I1 1504 aa25.04■■□□□ 1.6
AL359643.2-201ENST00000606227 SUPT5HO00267 1087 aaKnown RBP23.2■■□□□ 1.3
AL359643.2-201ENST00000606227 PPARGC1BQ86YN6 1023 aaKnown RBP23.2■■□□□ 1.3
AL359643.2-201ENST00000606227 HRCP23327 699 aa23.18■■□□□ 1.3
AL359643.2-201ENST00000606227 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
AL359643.2-201ENST00000606227 PCGF6Q9BYE7 350 aa23.12■■□□□ 1.29
AL359643.2-201ENST00000606227 PELP1Q8IZL8 1130 aaKnown RBP22.38■■□□□ 1.17
AL359643.2-201ENST00000606227 MYO15BQ96JP2 1530 aa22.37■■□□□ 1.17
AL359643.2-201ENST00000606227 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
AL359643.2-201ENST00000606227 LOC105371045A0A1W2PR82 267 aa22.22■■□□□ 1.15
AL359643.2-201ENST00000606227 SCAF1Q9H7N4 1312 aaKnown RBP22.17■■□□□ 1.14
AL359643.2-201ENST00000606227 DCAF8L2P0C7V8 631 aa22.06■■□□□ 1.12
AL359643.2-201ENST00000606227 EHMT2Q96KQ7 1210 aa21.95■■□□□ 1.1
AL359643.2-201ENST00000606227 TRIM26Q12899 539 aaPredicted RBP21.9■■□□□ 1.1
AL359643.2-201ENST00000606227 FAM9AQ8IZU1 332 aaPredicted RBP21.64■■□□□ 1.06
AL359643.2-201ENST00000606227 ZEB1P37275 1124 aaPredicted RBP21.63■■□□□ 1.05
AL359643.2-201ENST00000606227 NEUROD1Q13562 356 aa21.6■■□□□ 1.05
AL359643.2-201ENST00000606227 GTF3C3Q9Y5Q9 886 aa21.6■■□□□ 1.05
AL359643.2-201ENST00000606227 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
AL359643.2-201ENST00000606227 ACIN1Q9UKV3 1341 aaKnown RBP21.51■■□□□ 1.03
AL359643.2-201ENST00000606227 MYT1Q01538 1121 aa21.43■■□□□ 1.02
AL359643.2-201ENST00000606227 YTHDC1Q96MU7 727 aaKnown RBP21.4■■□□□ 1.02
AL359643.2-201ENST00000606227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.39■■□□□ 1.01
AL359643.2-201ENST00000606227 TTBK1Q5TCY1 1321 aaPredicted RBP21.38■■□□□ 1.01
AL359643.2-201ENST00000606227 CENPBP07199 599 aaPredicted RBP21.34■■□□□ 1.01
AL359643.2-201ENST00000606227 CCER1Q8TC90 406 aaPredicted RBP21.32■■□□□ 1
AL359643.2-201ENST00000606227 CCDC180Q9P1Z9 1646 aa21.27■■□□□ 1
AL359643.2-201ENST00000606227 DIEXFQ68CQ4 756 aaKnown RBP21.23■□□□□ 0.99
AL359643.2-201ENST00000606227 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
AL359643.2-201ENST00000606227 ZCCHC6Q5VYS8 1495 aaKnown RBP21.1■□□□□ 0.97
AL359643.2-201ENST00000606227 MIER1Q8N108 512 aa20.68■□□□□ 0.9
AL359643.2-201ENST00000606227 ZNF316A6NFI3 1004 aaPredicted RBP20.63■□□□□ 0.89
AL359643.2-201ENST00000606227 BCL11AQ9H165 835 aa20.52■□□□□ 0.87
AL359643.2-201ENST00000606227 HNRNPUL2Q1KMD3 747 aaKnown RBP20.48■□□□□ 0.87
AL359643.2-201ENST00000606227 BCANQ96GW7 911 aa20.44■□□□□ 0.86
AL359643.2-201ENST00000606227 ANP32EQ9BTT0 268 aa20.33■□□□□ 0.85
AL359643.2-201ENST00000606227 SUPT16HQ9Y5B9 1047 aaKnown RBP20.31■□□□□ 0.84
AL359643.2-201ENST00000606227 CSRNP3Q8WYN3 585 aa20.3■□□□□ 0.84
AL359643.2-201ENST00000606227 RANGAP1P46060 587 aaPredicted RBP20.27■□□□□ 0.84
AL359643.2-201ENST00000606227 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
AL359643.2-201ENST00000606227 TSHZ2Q9NRE2 1034 aa20.25■□□□□ 0.83
AL359643.2-201ENST00000606227 ABCC9O60706 1549 aa20.22■□□□□ 0.83
AL359643.2-201ENST00000606227 RSF1Q96T23 1441 aaPredicted RBP20.18■□□□□ 0.82
AL359643.2-201ENST00000606227 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
AL359643.2-201ENST00000606227 SCRIBQ14160 1630 aa20.15■□□□□ 0.82
AL359643.2-201ENST00000606227 ITGAEP38570 1179 aa20.01■□□□□ 0.79
AL359643.2-201ENST00000606227 FKBP8Q14318 412 aa20.01■□□□□ 0.79
AL359643.2-201ENST00000606227 KCNH8Q96L42 1107 aa19.98■□□□□ 0.79
AL359643.2-201ENST00000606227 APLP2Q06481 763 aa19.94■□□□□ 0.78
AL359643.2-201ENST00000606227 CEP162Q5TB80 1403 aa19.92■□□□□ 0.78
AL359643.2-201ENST00000606227 ERICH6Q7L0X2 663 aa19.88■□□□□ 0.77
AL359643.2-201ENST00000606227 NEFLP07196 543 aa19.84■□□□□ 0.77
AL359643.2-201ENST00000606227 RBM19Q9Y4C8 960 aaKnown RBP19.83■□□□□ 0.76
AL359643.2-201ENST00000606227 TRIM52Q96A61 297 aa19.78■□□□□ 0.76
AL359643.2-201ENST00000606227 CLSPNQ9HAW4 1339 aa19.76■□□□□ 0.75
AL359643.2-201ENST00000606227 NACADO15069 1562 aa19.73■□□□□ 0.75
AL359643.2-201ENST00000606227 SOGA1O94964 1423 aa19.72■□□□□ 0.75
AL359643.2-201ENST00000606227 CECR2Q9BXF3 1484 aa19.71■□□□□ 0.75
AL359643.2-201ENST00000606227 IRX6P78412 446 aaPredicted RBP19.7■□□□□ 0.74
AL359643.2-201ENST00000606227 HIRIP3Q9BW71 556 aaPredicted RBP19.69■□□□□ 0.74
AL359643.2-201ENST00000606227 DDX10Q13206 875 aaKnown RBP19.68■□□□□ 0.74
AL359643.2-201ENST00000606227 PRKCSHP14314 528 aaPredicted RBP19.67■□□□□ 0.74
AL359643.2-201ENST00000606227 CCDC88BA6NC98 1476 aa19.67■□□□□ 0.74
AL359643.2-201ENST00000606227 ABCC8Q09428 1581 aa19.66■□□□□ 0.74
AL359643.2-201ENST00000606227 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.73
AL359643.2-201ENST00000606227 MSH5O43196 834 aa19.61■□□□□ 0.73
AL359643.2-201ENST00000606227 TNIKQ9UKE5 1360 aa19.59■□□□□ 0.73
AL359643.2-201ENST00000606227 RUSC2Q8N2Y8 1516 aa19.58■□□□□ 0.73
AL359643.2-201ENST00000606227 MROH2BQ7Z745 1585 aa19.55■□□□□ 0.72
AL359643.2-201ENST00000606227 NBR1Q14596 966 aa19.53■□□□□ 0.72
AL359643.2-201ENST00000606227 WIZO95785 1651 aa19.5■□□□□ 0.71
AL359643.2-201ENST00000606227 CDK11AQ9UQ88 783 aaPredicted RBP19.45■□□□□ 0.7
AL359643.2-201ENST00000606227 DEKP35659 375 aaKnown RBP19.43■□□□□ 0.7
AL359643.2-201ENST00000606227 DHX57Q6P158 1386 aaKnown RBP19.43■□□□□ 0.7
AL359643.2-201ENST00000606227 PABPN1Q86U42 306 aaKnown RBP eCLIP19.42■□□□□ 0.7
AL359643.2-201ENST00000606227 CLIP1P30622 1438 aa19.41■□□□□ 0.7
AL359643.2-201ENST00000606227 ANO8Q9HCE9 1232 aaPredicted RBP19.4■□□□□ 0.7
AL359643.2-201ENST00000606227 RTN4Q9NQC3 1192 aaKnown RBP19.36■□□□□ 0.69
AL359643.2-201ENST00000606227 GOLGA3Q08378 1498 aa19.35■□□□□ 0.69
AL359643.2-201ENST00000606227 ANP32CO43423 234 aa19.35■□□□□ 0.69
AL359643.2-201ENST00000606227 SIN3AQ96ST3 1273 aa19.34■□□□□ 0.69
AL359643.2-201ENST00000606227 CCDC136Q96JN2 1154 aa19.33■□□□□ 0.68
AL359643.2-201ENST00000606227 HNRNPUQ00839 825 aaKnown RBP eCLIP19.33■□□□□ 0.68
AL359643.2-201ENST00000606227 KANK4Q5T7N3 995 aaPredicted RBP19.32■□□□□ 0.68
AL359643.2-201ENST00000606227 CNGB1Q14028 1251 aaPredicted RBP19.3■□□□□ 0.68
AL359643.2-201ENST00000606227 UNC13AQ9UPW8 1703 aa19.25■□□□□ 0.67
AL359643.2-201ENST00000606227 B4GALNT3Q6L9W6 998 aa19.22■□□□□ 0.67
AL359643.2-201ENST00000606227 ATP1B4Q9UN42 357 aaPredicted RBP19.22■□□□□ 0.67
AL359643.2-201ENST00000606227 VPS8Q8N3P4 1428 aa19.22■□□□□ 0.67
AL359643.2-201ENST00000606227 BAZ1AQ9NRL2 1556 aaPredicted RBP19.21■□□□□ 0.67
AL359643.2-201ENST00000606227 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.2■□□□□ 0.66
AL359643.2-201ENST00000606227 SENP3-EIF4A1A0A087X0R7 540 aa19.2■□□□□ 0.66
AL359643.2-201ENST00000606227 SALL2Q9Y467 1007 aaPredicted RBP19.19■□□□□ 0.66
AL359643.2-201ENST00000606227 FAM50AQ14320 339 aaKnown RBP19.18■□□□□ 0.66
AL359643.2-201ENST00000606227 FANCIQ9NVI1 1328 aa19.15■□□□□ 0.66
AL359643.2-201ENST00000606227 RTL5Q5HYW3 569 aaPredicted RBP19.14■□□□□ 0.65
AL359643.2-201ENST00000606227 PAK3O75914 559 aaPredicted RBP19.12■□□□□ 0.65
AL359643.2-201ENST00000606227 EEA1Q15075 1411 aa19.11■□□□□ 0.65
AL359643.2-201ENST00000606227 SMARCA4P51532 1647 aa19.1■□□□□ 0.65
AL359643.2-201ENST00000606227 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms