RNA–Protein interactions for RNA: ENST00000447409.6

TRIM73-204, Transcript of tripartite motif containing 73, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM73, Length 1,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM73-204ENST00000447409 NISCHQ9Y2I1 1504 aa38.5■■■■□ 3.75
TRIM73-204ENST00000447409 CCDC180Q9P1Z9 1646 aa34.35■■■■□ 3.09
TRIM73-204ENST00000447409 ABCC9O60706 1549 aa33.93■■■■□ 3.02
TRIM73-204ENST00000447409 RB1CC1Q8TDY2 1594 aa32.49■■■□□ 2.79
TRIM73-204ENST00000447409 DCAF8L2P0C7V8 631 aa32.39■■■□□ 2.78
TRIM73-204ENST00000447409 NACADO15069 1562 aa32.36■■■□□ 2.77
TRIM73-204ENST00000447409 MYO15BQ96JP2 1530 aa32.04■■■□□ 2.72
TRIM73-204ENST00000447409 ZCCHC6Q5VYS8 1495 aaKnown RBP32.01■■■□□ 2.71
TRIM73-204ENST00000447409 DCAF1Q9Y4B6 1507 aa31.81■■■□□ 2.68
TRIM73-204ENST00000447409 UNC13AQ9UPW8 1703 aa31.72■■■□□ 2.67
TRIM73-204ENST00000447409 PABPN1Q86U42 306 aaKnown RBP eCLIP31.67■■■□□ 2.66
TRIM73-204ENST00000447409 BICRAQ9NZM4 1560 aa31.48■■■□□ 2.63
TRIM73-204ENST00000447409 SCRIBQ14160 1630 aa31.37■■■□□ 2.61
TRIM73-204ENST00000447409 DNAJC5BQ9UF47 199 aa31.35■■■□□ 2.61
TRIM73-204ENST00000447409 SHROOM4Q9ULL8 1493 aa31.12■■■□□ 2.57
TRIM73-204ENST00000447409 EIF4G1Q04637 1599 aaKnown RBP30.71■■■□□ 2.51
TRIM73-204ENST00000447409 CC2D2AQ9P2K1 1620 aa30.65■■■□□ 2.5
TRIM73-204ENST00000447409 CECR2Q9BXF3 1484 aa30.5■■■□□ 2.47
TRIM73-204ENST00000447409 SMARCA4P51532 1647 aa29.95■■■□□ 2.38
TRIM73-204ENST00000447409 BAZ1AQ9NRL2 1556 aaPredicted RBP29.87■■■□□ 2.37
TRIM73-204ENST00000447409 NCAPD3P42695 1498 aa29.86■■■□□ 2.37
TRIM73-204ENST00000447409 ATAD2BQ9ULI0 1458 aa29.85■■■□□ 2.37
TRIM73-204ENST00000447409 SMARCA2P51531 1590 aa29.81■■■□□ 2.36
TRIM73-204ENST00000447409 HMGXB3Q12766 1538 aa29.69■■■□□ 2.34
TRIM73-204ENST00000447409 MROH2BQ7Z745 1585 aa29.68■■■□□ 2.34
TRIM73-204ENST00000447409 BAZ1BQ9UIG0 1483 aaKnown RBP29.62■■■□□ 2.33
TRIM73-204ENST00000447409 PEG3Q9GZU2 1588 aa29.62■■■□□ 2.33
TRIM73-204ENST00000447409 WIZO95785 1651 aa29.35■■■□□ 2.29
TRIM73-204ENST00000447409 ERCC6Q03468 1493 aa29.29■■■□□ 2.28
TRIM73-204ENST00000447409 NESP48681 1621 aa29.27■■■□□ 2.28
TRIM73-204ENST00000447409 RSF1Q96T23 1441 aaPredicted RBP29.24■■■□□ 2.27
TRIM73-204ENST00000447409 LAMC3Q9Y6N6 1575 aa29.13■■■□□ 2.25
TRIM73-204ENST00000447409 TOP2AP11388 1531 aaKnown RBP29.02■■■□□ 2.24
TRIM73-204ENST00000447409 CUX2O14529 1486 aa29.02■■■□□ 2.24
TRIM73-204ENST00000447409 CADPSQ9ULU8 1353 aa29■■■□□ 2.23
TRIM73-204ENST00000447409 PDS5BQ9NTI5 1447 aa28.96■■■□□ 2.23
TRIM73-204ENST00000447409 KIF21AQ7Z4S6 1674 aa28.9■■■□□ 2.22
TRIM73-204ENST00000447409 THOC2Q8NI27 1593 aaKnown RBP28.86■■■□□ 2.21
TRIM73-204ENST00000447409 CFTRP13569 1480 aa28.75■■■□□ 2.19
TRIM73-204ENST00000447409 CCDC88BA6NC98 1476 aa28.68■■■□□ 2.18
TRIM73-204ENST00000447409 MRC2Q9UBG0 1479 aa28.68■■■□□ 2.18
TRIM73-204ENST00000447409 CEP164Q9UPV0 1460 aa28.68■■■□□ 2.18
TRIM73-204ENST00000447409 FANCD2Q9BXW9 1451 aa28.67■■■□□ 2.18
TRIM73-204ENST00000447409 WDR62O43379 1518 aa28.58■■■□□ 2.17
TRIM73-204ENST00000447409 PRDM2Q13029 1718 aa28.51■■■□□ 2.15
TRIM73-204ENST00000447409 DNAJC5Q9H3Z4 198 aa28.45■■■□□ 2.14
TRIM73-204ENST00000447409 URB2Q14146 1524 aaKnown RBP28.39■■■□□ 2.14
TRIM73-204ENST00000447409 SUPT5HO00267 1087 aaKnown RBP28.37■■■□□ 2.13
TRIM73-204ENST00000447409 TOPBP1Q92547 1522 aa28.18■■■□□ 2.1
TRIM73-204ENST00000447409 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
TRIM73-204ENST00000447409 DNMBPQ6XZF7 1577 aa28.12■■■□□ 2.09
TRIM73-204ENST00000447409 IFT140Q96RY7 1462 aa28.08■■■□□ 2.09
TRIM73-204ENST00000447409 ZNF608Q9ULD9 1512 aaPredicted RBP27.97■■■□□ 2.07
TRIM73-204ENST00000447409 POLA1P09884 1462 aaPredicted RBP27.92■■■□□ 2.06
TRIM73-204ENST00000447409 TARBP1Q13395 1621 aaKnown RBP27.88■■■□□ 2.05
TRIM73-204ENST00000447409 CUX1P39880 1505 aa27.87■■■□□ 2.05
TRIM73-204ENST00000447409 EIF4G3O43432 1585 aaKnown RBP27.86■■■□□ 2.05
TRIM73-204ENST00000447409 FGD5Q6ZNL6 1462 aa27.83■■■□□ 2.05
TRIM73-204ENST00000447409 SOGA1O94964 1423 aa27.82■■■□□ 2.04
TRIM73-204ENST00000447409 RAD54L2Q9Y4B4 1467 aa27.82■■■□□ 2.04
TRIM73-204ENST00000447409 OSCARQ8IYS5 282 aa27.8■■■□□ 2.04
TRIM73-204ENST00000447409 AQRO60306 1485 aaKnown RBP eCLIP27.79■■■□□ 2.04
TRIM73-204ENST00000447409 TDRD9Q8NDG6 1382 aaKnown RBP27.71■■■□□ 2.03
TRIM73-204ENST00000447409 WDR97A6NE52 1622 aa27.63■■■□□ 2.01
TRIM73-204ENST00000447409 WRNQ14191 1432 aaPredicted RBP eCLIP27.6■■■□□ 2.01
TRIM73-204ENST00000447409 FBLN2P98095 1184 aa27.57■■■□□ 2
TRIM73-204ENST00000447409 CHD1O14646 1710 aa27.55■■■□□ 2
TRIM73-204ENST00000447409 TOP2BQ02880 1626 aa27.55■■■□□ 2
TRIM73-204ENST00000447409 SYNJ1O43426 1573 aa27.54■■■□□ 2
TRIM73-204ENST00000447409 BIVM-ERCC5R4GMW8 1640 aa27.54■■■□□ 2
TRIM73-204ENST00000447409 SNAPC4Q5SXM2 1469 aa27.53■■■□□ 2
TRIM73-204ENST00000447409 GRIN2BQ13224 1484 aa27.52■■■□□ 2
TRIM73-204ENST00000447409 ABCA10Q8WWZ4 1543 aa27.51■■■□□ 2
TRIM73-204ENST00000447409 GAPVD1Q14C86 1478 aa27.49■■□□□ 1.99
TRIM73-204ENST00000447409 TRIM41Q8WV44 630 aa27.48■■□□□ 1.99
TRIM73-204ENST00000447409 MAGI1Q96QZ7 1491 aaPredicted RBP27.46■■□□□ 1.99
TRIM73-204ENST00000447409 PBRM1Q86U86 1689 aa27.44■■□□□ 1.98
TRIM73-204ENST00000447409 ABCA5Q8WWZ7 1642 aa27.44■■□□□ 1.98
TRIM73-204ENST00000447409 CHMP7Q8WUX9 453 aaPredicted RBP27.42■■□□□ 1.98
TRIM73-204ENST00000447409 RIMBP3CA6NJZ7 1639 aa27.37■■□□□ 1.97
TRIM73-204ENST00000447409 RIMBP3BA6NNM3 1639 aa27.37■■□□□ 1.97
TRIM73-204ENST00000447409 RIMBP3Q9UFD9 1639 aa27.37■■□□□ 1.97
TRIM73-204ENST00000447409 SYNJ2O15056 1496 aa27.37■■□□□ 1.97
TRIM73-204ENST00000447409 ARHGEF11O15085 1522 aa27.33■■□□□ 1.97
TRIM73-204ENST00000447409 CLASP1Q7Z460 1538 aa27.23■■□□□ 1.95
TRIM73-204ENST00000447409 ADAMTS12P58397 1594 aa27.21■■□□□ 1.95
TRIM73-204ENST00000447409 ERICH3Q5RHP9 1530 aa27.19■■□□□ 1.94
TRIM73-204ENST00000447409 GRIN2AQ12879 1464 aa27.17■■□□□ 1.94
TRIM73-204ENST00000447409 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
TRIM73-204ENST00000447409 CYB5RLQ6IPT4 315 aa27.13■■□□□ 1.93
TRIM73-204ENST00000447409 ARAP1Q96P48 1450 aa27.09■■□□□ 1.93
TRIM73-204ENST00000447409 KIF27Q86VH2 1401 aa27.05■■□□□ 1.92
TRIM73-204ENST00000447409 CEP170Q5SW79 1584 aa27.04■■□□□ 1.92
TRIM73-204ENST00000447409 NUP160Q12769 1436 aa27.03■■□□□ 1.92
TRIM73-204ENST00000447409 IGF1RP08069 1367 aa26.95■■□□□ 1.9
TRIM73-204ENST00000447409 CUL7Q14999 1698 aa26.9■■□□□ 1.9
TRIM73-204ENST00000447409 ERCC6L2Q5T890 1561 aa26.85■■□□□ 1.89
TRIM73-204ENST00000447409 SHROOM2Q13796 1616 aa26.85■■□□□ 1.89
TRIM73-204ENST00000447409 RUSC2Q8N2Y8 1516 aa26.81■■□□□ 1.88
TRIM73-204ENST00000447409 CARMIL1Q5VZK9 1371 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms