Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 MIR3615-201ENST00000581999 87 ntBASIC12.91□□□□□ -0.34
FOXG1P55316 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.91□□□□□ -0.34
FOXG1P55316 BNIP3P13-201ENST00000599968 566 ntBASIC12.91□□□□□ -0.34
FOXG1P55316 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.91□□□□□ -0.34
FOXG1P55316 AC244093.1-201ENST00000610837 814 ntBASIC12.91□□□□□ -0.34
FOXG1P55316 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.91□□□□□ -0.34
FOXG1P55316 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
FOXG1P55316 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.91□□□□□ -0.34
FOXG1P55316 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.91□□□□□ -0.34
FOXG1P55316 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.91□□□□□ -0.34
FOXG1P55316 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.91□□□□□ -0.34
FOXG1P55316 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.91□□□□□ -0.34
FOXG1P55316 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.91□□□□□ -0.34
FOXG1P55316 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
FOXG1P55316 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.91□□□□□ -0.34
FOXG1P55316 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FOXG1P55316 AC063926.3-201ENST00000624734 5658 ntBASIC12.91□□□□□ -0.34
FOXG1P55316 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
FOXG1P55316 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.9□□□□□ -0.34
FOXG1P55316 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
FOXG1P55316 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
FOXG1P55316 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.9□□□□□ -0.34
FOXG1P55316 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
FOXG1P55316 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
FOXG1P55316 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
FOXG1P55316 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
FOXG1P55316 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
FOXG1P55316 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 GPAA1P2-201ENST00000417923 928 ntBASIC12.9□□□□□ -0.34
FOXG1P55316 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.9□□□□□ -0.34
FOXG1P55316 AC126915.1-201ENST00000522847 1038 ntBASIC12.9□□□□□ -0.34
FOXG1P55316 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.9□□□□□ -0.34
FOXG1P55316 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.9□□□□□ -0.34
FOXG1P55316 AC005324.6-201ENST00000587972 613 ntBASIC12.9□□□□□ -0.34
FOXG1P55316 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
FOXG1P55316 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.9□□□□□ -0.34
FOXG1P55316 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
FOXG1P55316 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 AC215219.1-201ENST00000400706 1817 ntBASIC12.9□□□□□ -0.34
FOXG1P55316 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FOXG1P55316 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.9□□□□□ -0.35
FOXG1P55316 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
FOXG1P55316 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.89□□□□□ -0.35
FOXG1P55316 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
FOXG1P55316 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.89□□□□□ -0.35
FOXG1P55316 MYADML-201ENST00000474610 2147 ntBASIC12.89□□□□□ -0.35
FOXG1P55316 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.89□□□□□ -0.35
FOXG1P55316 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.89□□□□□ -0.35
FOXG1P55316 AC005912.2-201ENST00000619492 2400 ntBASIC12.89□□□□□ -0.35
FOXG1P55316 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.89□□□□□ -0.35
FOXG1P55316 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
FOXG1P55316 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms