RNA–Protein interactions for RNA: ENST00000548118.6

ATF7-204, Transcript of activating transcription factor 7, humanhuman

TSL 1 (best) BASIC

Gene ATF7, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7-204ENST00000548118 NISCHQ9Y2I1 1504 aa38.5■■■■□ 3.75
ATF7-204ENST00000548118 ABCC9O60706 1549 aa35.75■■■■□ 3.31
ATF7-204ENST00000548118 CCDC180Q9P1Z9 1646 aa34.98■■■■□ 3.19
ATF7-204ENST00000548118 DNAJC5BQ9UF47 199 aa34.26■■■■□ 3.08
ATF7-204ENST00000548118 RB1CC1Q8TDY2 1594 aa33.74■■■□□ 2.99
ATF7-204ENST00000548118 NACADO15069 1562 aa33.31■■■□□ 2.92
ATF7-204ENST00000548118 PABPN1Q86U42 306 aaKnown RBP eCLIP33.13■■■□□ 2.89
ATF7-204ENST00000548118 DCAF8L2P0C7V8 631 aa32.88■■■□□ 2.85
ATF7-204ENST00000548118 UNC13AQ9UPW8 1703 aa32.82■■■□□ 2.84
ATF7-204ENST00000548118 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
ATF7-204ENST00000548118 MYO15BQ96JP2 1530 aa32.61■■■□□ 2.81
ATF7-204ENST00000548118 CECR2Q9BXF3 1484 aa32.35■■■□□ 2.77
ATF7-204ENST00000548118 SHROOM4Q9ULL8 1493 aa32.35■■■□□ 2.77
ATF7-204ENST00000548118 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.76
ATF7-204ENST00000548118 DNAJC5Q9H3Z4 198 aa32.26■■■□□ 2.75
ATF7-204ENST00000548118 AEBP2Q6ZN18 517 aaPredicted RBP32.25■■■□□ 2.75
ATF7-204ENST00000548118 EIF4G1Q04637 1599 aaKnown RBP32.01■■■□□ 2.71
ATF7-204ENST00000548118 DCAF1Q9Y4B6 1507 aa31.82■■■□□ 2.68
ATF7-204ENST00000548118 ZCCHC6Q5VYS8 1495 aaKnown RBP31.71■■■□□ 2.67
ATF7-204ENST00000548118 SCRIBQ14160 1630 aa31.71■■■□□ 2.67
ATF7-204ENST00000548118 CUX2O14529 1486 aa31.29■■■□□ 2.6
ATF7-204ENST00000548118 ERCC6Q03468 1493 aa31.02■■■□□ 2.56
ATF7-204ENST00000548118 NCAPD3P42695 1498 aa30.75■■■□□ 2.51
ATF7-204ENST00000548118 CHIC1Q5VXU3 224 aa30.65■■■□□ 2.5
ATF7-204ENST00000548118 ATAD2BQ9ULI0 1458 aa30.48■■■□□ 2.47
ATF7-204ENST00000548118 HMGXB3Q12766 1538 aa30.42■■■□□ 2.46
ATF7-204ENST00000548118 TRIM41Q8WV44 630 aa30.42■■■□□ 2.46
ATF7-204ENST00000548118 NESP48681 1621 aa30.41■■■□□ 2.46
ATF7-204ENST00000548118 SMARCA2P51531 1590 aa30.41■■■□□ 2.46
ATF7-204ENST00000548118 THOC2Q8NI27 1593 aaKnown RBP30.32■■■□□ 2.45
ATF7-204ENST00000548118 LAMC3Q9Y6N6 1575 aa30.2■■■□□ 2.43
ATF7-204ENST00000548118 SMARCA4P51532 1647 aa30.2■■■□□ 2.43
ATF7-204ENST00000548118 BAZ1BQ9UIG0 1483 aaKnown RBP30.17■■■□□ 2.42
ATF7-204ENST00000548118 PDS5BQ9NTI5 1447 aa30.1■■■□□ 2.41
ATF7-204ENST00000548118 KIF21AQ7Z4S6 1674 aa30.01■■■□□ 2.39
ATF7-204ENST00000548118 BAZ1AQ9NRL2 1556 aaPredicted RBP29.99■■■□□ 2.39
ATF7-204ENST00000548118 PEG3Q9GZU2 1588 aa29.97■■■□□ 2.39
ATF7-204ENST00000548118 MRC2Q9UBG0 1479 aa29.83■■■□□ 2.37
ATF7-204ENST00000548118 CADPSQ9ULU8 1353 aa29.77■■■□□ 2.36
ATF7-204ENST00000548118 WDR62O43379 1518 aa29.76■■■□□ 2.36
ATF7-204ENST00000548118 OSCARQ8IYS5 282 aa29.74■■■□□ 2.35
ATF7-204ENST00000548118 MROH2BQ7Z745 1585 aa29.59■■■□□ 2.33
ATF7-204ENST00000548118 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
ATF7-204ENST00000548118 FANCD2Q9BXW9 1451 aa29.41■■■□□ 2.3
ATF7-204ENST00000548118 RIMBP3CA6NJZ7 1639 aa29.32■■■□□ 2.28
ATF7-204ENST00000548118 RIMBP3BA6NNM3 1639 aa29.32■■■□□ 2.28
ATF7-204ENST00000548118 RIMBP3Q9UFD9 1639 aa29.32■■■□□ 2.28
ATF7-204ENST00000548118 CFTRP13569 1480 aa29.23■■■□□ 2.27
ATF7-204ENST00000548118 ARHGEF11O15085 1522 aa29.17■■■□□ 2.26
ATF7-204ENST00000548118 WIZO95785 1651 aa29.17■■■□□ 2.26
ATF7-204ENST00000548118 URB2Q14146 1524 aaKnown RBP29.16■■■□□ 2.26
ATF7-204ENST00000548118 TRHP20396 242 aaPredicted RBP29.03■■■□□ 2.24
ATF7-204ENST00000548118 CYB5RLQ6IPT4 315 aa29.03■■■□□ 2.24
ATF7-204ENST00000548118 IFT140Q96RY7 1462 aa29■■■□□ 2.23
ATF7-204ENST00000548118 ZNF608Q9ULD9 1512 aaPredicted RBP28.93■■■□□ 2.22
ATF7-204ENST00000548118 TOP2AP11388 1531 aaKnown RBP28.83■■■□□ 2.21
ATF7-204ENST00000548118 PRDM2Q13029 1718 aa28.82■■■□□ 2.2
ATF7-204ENST00000548118 ARAP1Q96P48 1450 aa28.79■■■□□ 2.2
ATF7-204ENST00000548118 RSF1Q96T23 1441 aaPredicted RBP28.78■■■□□ 2.2
ATF7-204ENST00000548118 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
ATF7-204ENST00000548118 ABCC8Q09428 1581 aa28.74■■■□□ 2.19
ATF7-204ENST00000548118 TOPBP1Q92547 1522 aa28.73■■■□□ 2.19
ATF7-204ENST00000548118 CHD1O14646 1710 aa28.67■■■□□ 2.18
ATF7-204ENST00000548118 FBLN2P98095 1184 aa28.63■■■□□ 2.17
ATF7-204ENST00000548118 AQRO60306 1485 aaKnown RBP eCLIP28.58■■■□□ 2.175e-7■■■■□ 19.7
ATF7-204ENST00000548118 DNMBPQ6XZF7 1577 aa28.56■■■□□ 2.16
ATF7-204ENST00000548118 TARBP1Q13395 1621 aaKnown RBP28.51■■■□□ 2.15
ATF7-204ENST00000548118 CCDC88BA6NC98 1476 aa28.48■■■□□ 2.15
ATF7-204ENST00000548118 POLA1P09884 1462 aaPredicted RBP28.37■■■□□ 2.13
ATF7-204ENST00000548118 CLASP1Q7Z460 1538 aa28.37■■■□□ 2.13
ATF7-204ENST00000548118 SYNJ1O43426 1573 aa28.34■■■□□ 2.13
ATF7-204ENST00000548118 CHMP7Q8WUX9 453 aaPredicted RBP28.32■■■□□ 2.12
ATF7-204ENST00000548118 WDR97A6NE52 1622 aa28.3■■■□□ 2.12
ATF7-204ENST00000548118 TDRD9Q8NDG6 1382 aaKnown RBP28.28■■■□□ 2.12
ATF7-204ENST00000548118 SNAPC4Q5SXM2 1469 aa28.27■■■□□ 2.12
ATF7-204ENST00000548118 SOGA1O94964 1423 aa28.26■■■□□ 2.12
ATF7-204ENST00000548118 MAGI1Q96QZ7 1491 aaPredicted RBP28.25■■■□□ 2.11
ATF7-204ENST00000548118 RAD54L2Q9Y4B4 1467 aa28.23■■■□□ 2.11
ATF7-204ENST00000548118 GAPVD1Q14C86 1478 aa28.17■■■□□ 2.1
ATF7-204ENST00000548118 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
ATF7-204ENST00000548118 GRIN2BQ13224 1484 aa28.15■■■□□ 2.1
ATF7-204ENST00000548118 FGD5Q6ZNL6 1462 aa28.07■■■□□ 2.08
ATF7-204ENST00000548118 PBRM1Q86U86 1689 aa27.88■■■□□ 2.05
ATF7-204ENST00000548118 CUX1P39880 1505 aa27.87■■■□□ 2.05
ATF7-204ENST00000548118 ERCC6L2Q5T890 1561 aa27.77■■■□□ 2.04
ATF7-204ENST00000548118 GRIN2AQ12879 1464 aa27.75■■■□□ 2.03
ATF7-204ENST00000548118 CEP170Q5SW79 1584 aa27.73■■■□□ 2.03
ATF7-204ENST00000548118 ABCA10Q8WWZ4 1543 aa27.73■■■□□ 2.03
ATF7-204ENST00000548118 ABCA5Q8WWZ7 1642 aa27.73■■■□□ 2.03
ATF7-204ENST00000548118 KIF13AQ9H1H9 1805 aa27.72■■■□□ 2.03
ATF7-204ENST00000548118 NUP160Q12769 1436 aa27.69■■■□□ 2.02
ATF7-204ENST00000548118 SHROOM2Q13796 1616 aa27.64■■■□□ 2.02
ATF7-204ENST00000548118 ILDR1Q86SU0 546 aaPredicted RBP27.63■■■□□ 2.01
ATF7-204ENST00000548118 SENP3Q9H4L4 574 aaPredicted RBP27.61■■■□□ 2.01
ATF7-204ENST00000548118 ADAMTS12P58397 1594 aa27.58■■■□□ 2.01
ATF7-204ENST00000548118 FAM69CQ0P6D2 419 aa27.58■■■□□ 2.01
ATF7-204ENST00000548118 ABCC10Q5T3U5 1492 aa27.57■■■□□ 2
ATF7-204ENST00000548118 NPM1P06748 294 aaKnown RBP eCLIP27.55■■■□□ 2
ATF7-204ENST00000548118 FHAD1B1AJZ9 1412 aa27.54■■■□□ 2
ATF7-204ENST00000548118 KDM4FA0A1W2PPD8 638 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms