Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 BTBD6P1-201ENST00000412176 1267 ntBASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 AL645933.1-201ENST00000440087 609 ntBASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 KLF2P1-201ENST00000447438 1042 ntBASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 MIR6720-201ENST00000611664 98 ntBASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 AL096828.3-201ENST00000615354 462 ntBASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 MIR6752-201ENST00000618442 71 ntBASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 AL033527.4-201ENST00000641026 673 ntBASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 AC005089.1-201ENST00000619486 2241 ntBASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDHA4Q9UN74 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 MIR663B-201ENST00000408361 115 ntBASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 AL157407.1-201ENST00000435784 904 ntBASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 AC027237.1-201ENST00000560942 655 ntBASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 AC100827.2-201ENST00000563214 1194 ntBASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA4Q9UN74 TMBIM7P-202ENST00000641474 1516 ntBASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 AC011498.7-201ENST00000624986 2027 ntBASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 AC026748.1-201ENST00000624349 3251 ntBASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDHA4Q9UN74 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms