RNA–Protein interactions for RNA: ENST00000352981.7

CASP6-202, Transcript of caspase 6, humanhuman

TSL 1 (best) BASIC

Gene CASP6, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-202ENST00000352981 NISCHQ9Y2I1 1504 aa34.67■■■■□ 3.14
CASP6-202ENST00000352981 AEBP2Q6ZN18 517 aaPredicted RBP33.15■■■□□ 2.9
CASP6-202ENST00000352981 CHIC1Q5VXU3 224 aa32.48■■■□□ 2.79
CASP6-202ENST00000352981 CCDC180Q9P1Z9 1646 aa30.56■■■□□ 2.48
CASP6-202ENST00000352981 ABCC9O60706 1549 aa29.4■■■□□ 2.3
CASP6-202ENST00000352981 ZCCHC6Q5VYS8 1495 aaKnown RBP28.95■■■□□ 2.22
CASP6-202ENST00000352981 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.22
CASP6-202ENST00000352981 DCAF1Q9Y4B6 1507 aa28.86■■■□□ 2.21
CASP6-202ENST00000352981 NACADO15069 1562 aa28.76■■■□□ 2.19
CASP6-202ENST00000352981 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
CASP6-202ENST00000352981 RB1CC1Q8TDY2 1594 aa28.61■■■□□ 2.17
CASP6-202ENST00000352981 PHF23Q9BUL5 403 aaPredicted RBP28.56■■■□□ 2.16
CASP6-202ENST00000352981 SENP3Q9H4L4 574 aaPredicted RBP28.16■■■□□ 2.1
CASP6-202ENST00000352981 SCRIBQ14160 1630 aa27.74■■■□□ 2.03
CASP6-202ENST00000352981 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
CASP6-202ENST00000352981 UNC13AQ9UPW8 1703 aa27.64■■■□□ 2.02
CASP6-202ENST00000352981 BICRAQ9NZM4 1560 aa27.62■■■□□ 2.01
CASP6-202ENST00000352981 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.01
CASP6-202ENST00000352981 DNAJC5BQ9UF47 199 aa27.43■■□□□ 1.98
CASP6-202ENST00000352981 EIF4G1Q04637 1599 aaKnown RBP26.9■■□□□ 1.9
CASP6-202ENST00000352981 BAZ1AQ9NRL2 1556 aaPredicted RBP26.85■■□□□ 1.89
CASP6-202ENST00000352981 CECR2Q9BXF3 1484 aa26.84■■□□□ 1.89
CASP6-202ENST00000352981 SMARCA4P51532 1647 aa26.7■■□□□ 1.86
CASP6-202ENST00000352981 CC2D2AQ9P2K1 1620 aa26.62■■□□□ 1.85
CASP6-202ENST00000352981 MROH2BQ7Z745 1585 aa26.61■■□□□ 1.85
CASP6-202ENST00000352981 NCAPD3P42695 1498 aa26.59■■□□□ 1.85
CASP6-202ENST00000352981 PEG3Q9GZU2 1588 aa26.59■■□□□ 1.85
CASP6-202ENST00000352981 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
CASP6-202ENST00000352981 RSF1Q96T23 1441 aaPredicted RBP26.58■■□□□ 1.85
CASP6-202ENST00000352981 ATAD2BQ9ULI0 1458 aa26.57■■□□□ 1.84
CASP6-202ENST00000352981 PLPPR3Q6T4P5 718 aa26.42■■□□□ 1.82
CASP6-202ENST00000352981 HMGXB3Q12766 1538 aa26.4■■□□□ 1.82
CASP6-202ENST00000352981 BAZ1BQ9UIG0 1483 aaKnown RBP26.33■■□□□ 1.8
CASP6-202ENST00000352981 WIZO95785 1651 aa26.23■■□□□ 1.79
CASP6-202ENST00000352981 TOP2AP11388 1531 aaKnown RBP26.15■■□□□ 1.78
CASP6-202ENST00000352981 SUPT5HO00267 1087 aaKnown RBP26.11■■□□□ 1.77
CASP6-202ENST00000352981 FOXD1Q16676 465 aa26.1■■□□□ 1.77
CASP6-202ENST00000352981 CCDC88BA6NC98 1476 aa25.85■■□□□ 1.73
CASP6-202ENST00000352981 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
CASP6-202ENST00000352981 CFTRP13569 1480 aa25.73■■□□□ 1.71
CASP6-202ENST00000352981 LAMC3Q9Y6N6 1575 aa25.71■■□□□ 1.71
CASP6-202ENST00000352981 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.7
CASP6-202ENST00000352981 DNAJC5Q9H3Z4 198 aa25.6■■□□□ 1.69
CASP6-202ENST00000352981 NESP48681 1621 aa25.53■■□□□ 1.68
CASP6-202ENST00000352981 FANCD2Q9BXW9 1451 aa25.41■■□□□ 1.66
CASP6-202ENST00000352981 ERCC6Q03468 1493 aa25.39■■□□□ 1.65
CASP6-202ENST00000352981 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
CASP6-202ENST00000352981 PRDM2Q13029 1718 aa25.28■■□□□ 1.64
CASP6-202ENST00000352981 ABCC8Q09428 1581 aa25.26■■□□□ 1.63
CASP6-202ENST00000352981 MRC2Q9UBG0 1479 aa25.22■■□□□ 1.63
CASP6-202ENST00000352981 PPP6R1Q9UPN7 881 aa25.17■■□□□ 1.62
CASP6-202ENST00000352981 ADRA2BP18089 450 aa25.15■■□□□ 1.62
CASP6-202ENST00000352981 KIF21AQ7Z4S6 1674 aa25.13■■□□□ 1.61
CASP6-202ENST00000352981 WDR62O43379 1518 aa25.1■■□□□ 1.61
CASP6-202ENST00000352981 CUX2O14529 1486 aa25.1■■□□□ 1.61
CASP6-202ENST00000352981 THOC2Q8NI27 1593 aaKnown RBP25.07■■□□□ 1.6
CASP6-202ENST00000352981 URB2Q14146 1524 aaKnown RBP25.06■■□□□ 1.6
CASP6-202ENST00000352981 WRNQ14191 1432 aaPredicted RBP eCLIP25.05■■□□□ 1.6
CASP6-202ENST00000352981 DNMBPQ6XZF7 1577 aa25.03■■□□□ 1.6
CASP6-202ENST00000352981 TOPBP1Q92547 1522 aa25.03■■□□□ 1.6
CASP6-202ENST00000352981 CUX1P39880 1505 aa24.94■■□□□ 1.58
CASP6-202ENST00000352981 TOP2BQ02880 1626 aa24.89■■□□□ 1.58
CASP6-202ENST00000352981 IFT140Q96RY7 1462 aa24.86■■□□□ 1.57
CASP6-202ENST00000352981 POLA1P09884 1462 aaPredicted RBP24.85■■□□□ 1.57
CASP6-202ENST00000352981 SOGA1O94964 1423 aa24.83■■□□□ 1.57
CASP6-202ENST00000352981 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
CASP6-202ENST00000352981 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
CASP6-202ENST00000352981 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
CASP6-202ENST00000352981 SYNJ1O43426 1573 aa24.79■■□□□ 1.56
CASP6-202ENST00000352981 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
CASP6-202ENST00000352981 WDR97A6NE52 1622 aa24.7■■□□□ 1.54
CASP6-202ENST00000352981 TARBP1Q13395 1621 aaKnown RBP24.67■■□□□ 1.54
CASP6-202ENST00000352981 RAD54L2Q9Y4B4 1467 aa24.65■■□□□ 1.54
CASP6-202ENST00000352981 PIAS4Q8N2W9 510 aaPredicted RBP24.63■■□□□ 1.53
CASP6-202ENST00000352981 KIF27Q86VH2 1401 aa24.56■■□□□ 1.52
CASP6-202ENST00000352981 TDRD9Q8NDG6 1382 aaKnown RBP24.56■■□□□ 1.52
CASP6-202ENST00000352981 ZNF608Q9ULD9 1512 aaPredicted RBP24.54■■□□□ 1.52
CASP6-202ENST00000352981 GAPVD1Q14C86 1478 aa24.52■■□□□ 1.52
CASP6-202ENST00000352981 AQRO60306 1485 aaKnown RBP eCLIP24.5■■□□□ 1.51
CASP6-202ENST00000352981 GRIN2BQ13224 1484 aa24.49■■□□□ 1.51
CASP6-202ENST00000352981 EEA1Q15075 1411 aa24.48■■□□□ 1.51
CASP6-202ENST00000352981 ERICH3Q5RHP9 1530 aa24.43■■□□□ 1.5
CASP6-202ENST00000352981 ABCA5Q8WWZ7 1642 aa24.42■■□□□ 1.5
CASP6-202ENST00000352981 EIF4G3O43432 1585 aaKnown RBP24.41■■□□□ 1.5
CASP6-202ENST00000352981 IGF1RP08069 1367 aa24.41■■□□□ 1.5
CASP6-202ENST00000352981 MAGI1Q96QZ7 1491 aaPredicted RBP24.4■■□□□ 1.5
CASP6-202ENST00000352981 CSRNP3Q8WYN3 585 aa24.32■■□□□ 1.48
CASP6-202ENST00000352981 FHAD1B1AJZ9 1412 aa24.31■■□□□ 1.48
CASP6-202ENST00000352981 SYNJ2O15056 1496 aa24.27■■□□□ 1.48
CASP6-202ENST00000352981 SNAPC4Q5SXM2 1469 aa24.27■■□□□ 1.48
CASP6-202ENST00000352981 CHMP7Q8WUX9 453 aaPredicted RBP24.27■■□□□ 1.48
CASP6-202ENST00000352981 CARMIL1Q5VZK9 1371 aa24.26■■□□□ 1.47
CASP6-202ENST00000352981 RUSC2Q8N2Y8 1516 aa24.22■■□□□ 1.47
CASP6-202ENST00000352981 OSCARQ8IYS5 282 aa24.2■■□□□ 1.46
CASP6-202ENST00000352981 CUL7Q14999 1698 aa24.19■■□□□ 1.46
CASP6-202ENST00000352981 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
CASP6-202ENST00000352981 PRXQ9BXM0 1461 aa24.17■■□□□ 1.46
CASP6-202ENST00000352981 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
CASP6-202ENST00000352981 RAPGEF2Q9Y4G8 1499 aa24.14■■□□□ 1.45
CASP6-202ENST00000352981 FBLN2P98095 1184 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms