RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 NISCHQ9Y2I1 1504 aa34.38■■■■□ 3.09
SMPDL3B-201ENST00000373888 CCDC180Q9P1Z9 1646 aa30.28■■■□□ 2.44
SMPDL3B-201ENST00000373888 ABCC9O60706 1549 aa28.97■■■□□ 2.23
SMPDL3B-201ENST00000373888 ZCCHC6Q5VYS8 1495 aaKnown RBP28.79■■■□□ 2.2
SMPDL3B-201ENST00000373888 DCAF1Q9Y4B6 1507 aa28.5■■■□□ 2.15
SMPDL3B-201ENST00000373888 DCAF8L2P0C7V8 631 aa28.38■■■□□ 2.13
SMPDL3B-201ENST00000373888 MYO15BQ96JP2 1530 aa28.38■■■□□ 2.13
SMPDL3B-201ENST00000373888 NACADO15069 1562 aa28.31■■■□□ 2.12
SMPDL3B-201ENST00000373888 RB1CC1Q8TDY2 1594 aa28.17■■■□□ 2.1
SMPDL3B-201ENST00000373888 SCRIBQ14160 1630 aa27.66■■■□□ 2.02
SMPDL3B-201ENST00000373888 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
SMPDL3B-201ENST00000373888 SHROOM4Q9ULL8 1493 aa27.52■■■□□ 2
SMPDL3B-201ENST00000373888 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
SMPDL3B-201ENST00000373888 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.94
SMPDL3B-201ENST00000373888 CECR2Q9BXF3 1484 aa26.7■■□□□ 1.87
SMPDL3B-201ENST00000373888 BAZ1AQ9NRL2 1556 aaPredicted RBP26.6■■□□□ 1.85
SMPDL3B-201ENST00000373888 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
SMPDL3B-201ENST00000373888 EIF4G1Q04637 1599 aaKnown RBP26.53■■□□□ 1.84
SMPDL3B-201ENST00000373888 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
SMPDL3B-201ENST00000373888 RSF1Q96T23 1441 aaPredicted RBP26.44■■□□□ 1.82
SMPDL3B-201ENST00000373888 PEG3Q9GZU2 1588 aa26.29■■□□□ 1.8
SMPDL3B-201ENST00000373888 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
SMPDL3B-201ENST00000373888 WIZO95785 1651 aa26.24■■□□□ 1.79
SMPDL3B-201ENST00000373888 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
SMPDL3B-201ENST00000373888 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
SMPDL3B-201ENST00000373888 SUPT5HO00267 1087 aaKnown RBP26.22■■□□□ 1.79
SMPDL3B-201ENST00000373888 NCAPD3P42695 1498 aa26.12■■□□□ 1.77
SMPDL3B-201ENST00000373888 HMGXB3Q12766 1538 aa26.06■■□□□ 1.76
SMPDL3B-201ENST00000373888 BAZ1BQ9UIG0 1483 aaKnown RBP26.04■■□□□ 1.76
SMPDL3B-201ENST00000373888 TOP2AP11388 1531 aaKnown RBP26.02■■□□□ 1.76
SMPDL3B-201ENST00000373888 DNAJC5BQ9UF47 199 aa25.98■■□□□ 1.75
SMPDL3B-201ENST00000373888 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
SMPDL3B-201ENST00000373888 CFTRP13569 1480 aa25.39■■□□□ 1.65
SMPDL3B-201ENST00000373888 CADPSQ9ULU8 1353 aa25.38■■□□□ 1.65
SMPDL3B-201ENST00000373888 LAMC3Q9Y6N6 1575 aa25.31■■□□□ 1.64
SMPDL3B-201ENST00000373888 NESP48681 1621 aa25.27■■□□□ 1.64
SMPDL3B-201ENST00000373888 PRDM2Q13029 1718 aa25.23■■□□□ 1.63
SMPDL3B-201ENST00000373888 PDS5BQ9NTI5 1447 aa25.11■■□□□ 1.61
SMPDL3B-201ENST00000373888 FANCD2Q9BXW9 1451 aa25.08■■□□□ 1.61
SMPDL3B-201ENST00000373888 KIF21AQ7Z4S6 1674 aa24.99■■□□□ 1.59
SMPDL3B-201ENST00000373888 CEP164Q9UPV0 1460 aa24.99■■□□□ 1.59
SMPDL3B-201ENST00000373888 ABCC8Q09428 1581 aa24.96■■□□□ 1.59
SMPDL3B-201ENST00000373888 ERCC6Q03468 1493 aa24.91■■□□□ 1.58
SMPDL3B-201ENST00000373888 WRNQ14191 1432 aaPredicted RBP eCLIP24.9■■□□□ 1.58
SMPDL3B-201ENST00000373888 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
SMPDL3B-201ENST00000373888 CUX1P39880 1505 aa24.83■■□□□ 1.57
SMPDL3B-201ENST00000373888 MRC2Q9UBG0 1479 aa24.82■■□□□ 1.56
SMPDL3B-201ENST00000373888 SYNJ1O43426 1573 aa24.82■■□□□ 1.56
SMPDL3B-201ENST00000373888 URB2Q14146 1524 aaKnown RBP24.8■■□□□ 1.56
SMPDL3B-201ENST00000373888 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
SMPDL3B-201ENST00000373888 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
SMPDL3B-201ENST00000373888 BIVM-ERCC5R4GMW8 1640 aa24.78■■□□□ 1.56
SMPDL3B-201ENST00000373888 TOPBP1Q92547 1522 aa24.77■■□□□ 1.56
SMPDL3B-201ENST00000373888 THOC2Q8NI27 1593 aaKnown RBP24.76■■□□□ 1.55
SMPDL3B-201ENST00000373888 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
SMPDL3B-201ENST00000373888 WDR62O43379 1518 aa24.74■■□□□ 1.55
SMPDL3B-201ENST00000373888 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.53
SMPDL3B-201ENST00000373888 POLA1P09884 1462 aaPredicted RBP24.61■■□□□ 1.53
SMPDL3B-201ENST00000373888 CUX2O14529 1486 aa24.51■■□□□ 1.51
SMPDL3B-201ENST00000373888 SOGA1O94964 1423 aa24.49■■□□□ 1.51
SMPDL3B-201ENST00000373888 RAD54L2Q9Y4B4 1467 aa24.48■■□□□ 1.51
SMPDL3B-201ENST00000373888 IFT140Q96RY7 1462 aa24.45■■□□□ 1.5
SMPDL3B-201ENST00000373888 TARBP1Q13395 1621 aaKnown RBP24.45■■□□□ 1.5
SMPDL3B-201ENST00000373888 ABCA10Q8WWZ4 1543 aa24.44■■□□□ 1.5
SMPDL3B-201ENST00000373888 WDR97A6NE52 1622 aa24.42■■□□□ 1.5
SMPDL3B-201ENST00000373888 KIF27Q86VH2 1401 aa24.33■■□□□ 1.49
SMPDL3B-201ENST00000373888 EEA1Q15075 1411 aa24.32■■□□□ 1.48
SMPDL3B-201ENST00000373888 RUSC2Q8N2Y8 1516 aa24.3■■□□□ 1.48
SMPDL3B-201ENST00000373888 ABCA5Q8WWZ7 1642 aa24.29■■□□□ 1.48
SMPDL3B-201ENST00000373888 ZNF608Q9ULD9 1512 aaPredicted RBP24.28■■□□□ 1.48
SMPDL3B-201ENST00000373888 TDRD9Q8NDG6 1382 aaKnown RBP24.27■■□□□ 1.48
SMPDL3B-201ENST00000373888 GAPVD1Q14C86 1478 aa24.23■■□□□ 1.47
SMPDL3B-201ENST00000373888 AQRO60306 1485 aaKnown RBP eCLIP24.22■■□□□ 1.47
SMPDL3B-201ENST00000373888 EIF4G3O43432 1585 aaKnown RBP24.22■■□□□ 1.47
SMPDL3B-201ENST00000373888 FAM9AQ8IZU1 332 aaPredicted RBP24.2■■□□□ 1.46
SMPDL3B-201ENST00000373888 ERICH3Q5RHP9 1530 aa24.16■■□□□ 1.46
SMPDL3B-201ENST00000373888 IGF1RP08069 1367 aa24.16■■□□□ 1.46
SMPDL3B-201ENST00000373888 CSRNP3Q8WYN3 585 aa24.15■■□□□ 1.46
SMPDL3B-201ENST00000373888 GRIN2BQ13224 1484 aa24.15■■□□□ 1.46
SMPDL3B-201ENST00000373888 PBRM1Q86U86 1689 aa24.14■■□□□ 1.45
SMPDL3B-201ENST00000373888 CUL7Q14999 1698 aa24.06■■□□□ 1.44
SMPDL3B-201ENST00000373888 PRXQ9BXM0 1461 aa24.05■■□□□ 1.44
SMPDL3B-201ENST00000373888 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
SMPDL3B-201ENST00000373888 KIF21BO75037 1637 aa24.02■■□□□ 1.44
SMPDL3B-201ENST00000373888 SNAPC4Q5SXM2 1469 aa24.02■■□□□ 1.44
SMPDL3B-201ENST00000373888 MAGI1Q96QZ7 1491 aaPredicted RBP24.02■■□□□ 1.44
SMPDL3B-201ENST00000373888 ADAMTS12P58397 1594 aa24■■□□□ 1.43
SMPDL3B-201ENST00000373888 FHAD1B1AJZ9 1412 aa23.98■■□□□ 1.43
SMPDL3B-201ENST00000373888 RAPGEF2Q9Y4G8 1499 aa23.96■■□□□ 1.43
SMPDL3B-201ENST00000373888 GOLGA3Q08378 1498 aa23.92■■□□□ 1.42
SMPDL3B-201ENST00000373888 SYNJ2O15056 1496 aa23.91■■□□□ 1.42
SMPDL3B-201ENST00000373888 LOC105371045A0A1W2PR82 267 aa23.84■■□□□ 1.41
SMPDL3B-201ENST00000373888 GRIN2AQ12879 1464 aa23.83■■□□□ 1.41
SMPDL3B-201ENST00000373888 CHMP7Q8WUX9 453 aaPredicted RBP23.82■■□□□ 1.4
SMPDL3B-201ENST00000373888 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
SMPDL3B-201ENST00000373888 CHD1O14646 1710 aa23.77■■□□□ 1.4
SMPDL3B-201ENST00000373888 FBLN2P98095 1184 aa23.76■■□□□ 1.39
SMPDL3B-201ENST00000373888 UBTFP17480 764 aaKnown RBP23.75■■□□□ 1.39
SMPDL3B-201ENST00000373888 TNIKQ9UKE5 1360 aa23.75■■□□□ 1.39
SMPDL3B-201ENST00000373888 NUP160Q12769 1436 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms