Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC017083.2-201ENST00000608069 979 ntBASIC12.98□□□□□ -0.33
TMEM54Q969K7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 AL161772.1-201ENST00000610494 4412 ntBASIC12.97□□□□□ -0.33
TMEM54Q969K7 AC020910.6-201ENST00000623084 1459 ntBASIC12.97□□□□□ -0.33
TMEM54Q969K7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 E2F3P2-201ENST00000447755 1422 ntBASIC12.97□□□□□ -0.33
TMEM54Q969K7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 AC079178.1-201ENST00000420915 656 ntBASIC12.97□□□□□ -0.33
TMEM54Q969K7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 YBX1P6-201ENST00000442962 1002 ntBASIC12.97□□□□□ -0.33
TMEM54Q969K7 KRT223P-202ENST00000449164 1292 ntBASIC12.97□□□□□ -0.33
TMEM54Q969K7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 AC009955.4-201ENST00000597192 544 ntBASIC12.97□□□□□ -0.33
TMEM54Q969K7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 AC244157.2-201ENST00000616239 1006 ntBASIC12.97□□□□□ -0.33
TMEM54Q969K7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
TMEM54Q969K7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM54Q969K7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM54Q969K7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.96□□□□□ -0.33
TMEM54Q969K7 IGHV3-71-201ENST00000523324 359 ntBASIC12.96□□□□□ -0.33
TMEM54Q969K7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms