RNA–Protein interactions for RNA: ENST00000482086.5

PCCB-215, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-215ENST00000482086 NISCHQ9Y2I1 1504 aa33.92■■■■□ 3.02
PCCB-215ENST00000482086 CCDC180Q9P1Z9 1646 aa29.88■■■□□ 2.37
PCCB-215ENST00000482086 ABCC9O60706 1549 aa28.42■■■□□ 2.14
PCCB-215ENST00000482086 ZCCHC6Q5VYS8 1495 aaKnown RBP28.41■■■□□ 2.14
PCCB-215ENST00000482086 DCAF1Q9Y4B6 1507 aa28.15■■■□□ 2.1
PCCB-215ENST00000482086 DCAF8L2P0C7V8 631 aa28.03■■■□□ 2.08
PCCB-215ENST00000482086 MYO15BQ96JP2 1530 aa28■■■□□ 2.07
PCCB-215ENST00000482086 NACADO15069 1562 aa27.91■■■□□ 2.06
PCCB-215ENST00000482086 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
PCCB-215ENST00000482086 SCRIBQ14160 1630 aa27.25■■□□□ 1.95
PCCB-215ENST00000482086 SHROOM4Q9ULL8 1493 aa27.2■■□□□ 1.94
PCCB-215ENST00000482086 UNC13AQ9UPW8 1703 aa27.11■■□□□ 1.93
PCCB-215ENST00000482086 BICRAQ9NZM4 1560 aa26.81■■□□□ 1.88
PCCB-215ENST00000482086 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.86
PCCB-215ENST00000482086 CECR2Q9BXF3 1484 aa26.28■■□□□ 1.8
PCCB-215ENST00000482086 BAZ1AQ9NRL2 1556 aaPredicted RBP26.27■■□□□ 1.8
PCCB-215ENST00000482086 SMARCA4P51532 1647 aa26.16■■□□□ 1.78
PCCB-215ENST00000482086 MROH2BQ7Z745 1585 aa26.13■■□□□ 1.77
PCCB-215ENST00000482086 RSF1Q96T23 1441 aaPredicted RBP26.11■■□□□ 1.77
PCCB-215ENST00000482086 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
PCCB-215ENST00000482086 SUPT5HO00267 1087 aaKnown RBP26.03■■□□□ 1.76
PCCB-215ENST00000482086 PEG3Q9GZU2 1588 aa25.92■■□□□ 1.74
PCCB-215ENST00000482086 WIZO95785 1651 aa25.9■■□□□ 1.74
PCCB-215ENST00000482086 SMARCA2P51531 1590 aa25.88■■□□□ 1.73
PCCB-215ENST00000482086 ATAD2BQ9ULI0 1458 aa25.82■■□□□ 1.72
PCCB-215ENST00000482086 CC2D2AQ9P2K1 1620 aa25.77■■□□□ 1.72
PCCB-215ENST00000482086 NCAPD3P42695 1498 aa25.71■■□□□ 1.71
PCCB-215ENST00000482086 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
PCCB-215ENST00000482086 BAZ1BQ9UIG0 1483 aaKnown RBP25.67■■□□□ 1.7
PCCB-215ENST00000482086 HMGXB3Q12766 1538 aa25.67■■□□□ 1.7
PCCB-215ENST00000482086 CCDC88BA6NC98 1476 aa25.37■■□□□ 1.65
PCCB-215ENST00000482086 DNAJC5BQ9UF47 199 aa25.34■■□□□ 1.65
PCCB-215ENST00000482086 CADPSQ9ULU8 1353 aa25.01■■□□□ 1.59
PCCB-215ENST00000482086 CFTRP13569 1480 aa25■■□□□ 1.59
PCCB-215ENST00000482086 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
PCCB-215ENST00000482086 LAMC3Q9Y6N6 1575 aa24.95■■□□□ 1.58
PCCB-215ENST00000482086 NESP48681 1621 aa24.8■■□□□ 1.56
PCCB-215ENST00000482086 PDS5BQ9NTI5 1447 aa24.75■■□□□ 1.55
PCCB-215ENST00000482086 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
PCCB-215ENST00000482086 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.55
PCCB-215ENST00000482086 ABCC8Q09428 1581 aa24.64■■□□□ 1.54
PCCB-215ENST00000482086 WRNQ14191 1432 aaPredicted RBP eCLIP24.63■■□□□ 1.53
PCCB-215ENST00000482086 CEP164Q9UPV0 1460 aa24.62■■□□□ 1.53
PCCB-215ENST00000482086 TRIM41Q8WV44 630 aa24.6■■□□□ 1.53
PCCB-215ENST00000482086 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
PCCB-215ENST00000482086 TOP2BQ02880 1626 aa24.51■■□□□ 1.51
PCCB-215ENST00000482086 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
PCCB-215ENST00000482086 SYNJ1O43426 1573 aa24.49■■□□□ 1.51
PCCB-215ENST00000482086 ERCC6Q03468 1493 aa24.49■■□□□ 1.51
PCCB-215ENST00000482086 CUX1P39880 1505 aa24.47■■□□□ 1.51
PCCB-215ENST00000482086 DNMBPQ6XZF7 1577 aa24.45■■□□□ 1.51
PCCB-215ENST00000482086 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
PCCB-215ENST00000482086 TOPBP1Q92547 1522 aa24.39■■□□□ 1.5
PCCB-215ENST00000482086 URB2Q14146 1524 aaKnown RBP24.38■■□□□ 1.49
PCCB-215ENST00000482086 WDR62O43379 1518 aa24.3■■□□□ 1.48
PCCB-215ENST00000482086 THOC2Q8NI27 1593 aaKnown RBP24.29■■□□□ 1.48
PCCB-215ENST00000482086 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
PCCB-215ENST00000482086 POLA1P09884 1462 aaPredicted RBP24.23■■□□□ 1.47
PCCB-215ENST00000482086 SOGA1O94964 1423 aa24.17■■□□□ 1.46
PCCB-215ENST00000482086 EEA1Q15075 1411 aa24.17■■□□□ 1.46
PCCB-215ENST00000482086 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
PCCB-215ENST00000482086 RAD54L2Q9Y4B4 1467 aa24.08■■□□□ 1.45
PCCB-215ENST00000482086 KIF27Q86VH2 1401 aa24.08■■□□□ 1.45
PCCB-215ENST00000482086 IFT140Q96RY7 1462 aa24.08■■□□□ 1.44
PCCB-215ENST00000482086 CUX2O14529 1486 aa24.07■■□□□ 1.44
PCCB-215ENST00000482086 TARBP1Q13395 1621 aaKnown RBP24.07■■□□□ 1.44
PCCB-215ENST00000482086 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
PCCB-215ENST00000482086 FAM9AQ8IZU1 332 aaPredicted RBP24.01■■□□□ 1.43
PCCB-215ENST00000482086 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
PCCB-215ENST00000482086 CSRNP3Q8WYN3 585 aa23.97■■□□□ 1.43
PCCB-215ENST00000482086 ABCA5Q8WWZ7 1642 aa23.93■■□□□ 1.42
PCCB-215ENST00000482086 GAPVD1Q14C86 1478 aa23.91■■□□□ 1.42
PCCB-215ENST00000482086 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
PCCB-215ENST00000482086 ERICH3Q5RHP9 1530 aa23.86■■□□□ 1.41
PCCB-215ENST00000482086 IGF1RP08069 1367 aa23.84■■□□□ 1.41
PCCB-215ENST00000482086 ZNF608Q9ULD9 1512 aaPredicted RBP23.83■■□□□ 1.41
PCCB-215ENST00000482086 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.42e-6■■■■□ 22.2
PCCB-215ENST00000482086 PBRM1Q86U86 1689 aa23.82■■□□□ 1.4
PCCB-215ENST00000482086 EIF4G3O43432 1585 aaKnown RBP23.82■■□□□ 1.4
PCCB-215ENST00000482086 KIF21BO75037 1637 aa23.81■■□□□ 1.4
PCCB-215ENST00000482086 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
PCCB-215ENST00000482086 CUL7Q14999 1698 aa23.8■■□□□ 1.4
PCCB-215ENST00000482086 PRXQ9BXM0 1461 aa23.77■■□□□ 1.4
PCCB-215ENST00000482086 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
PCCB-215ENST00000482086 GOLGA3Q08378 1498 aa23.74■■□□□ 1.39
PCCB-215ENST00000482086 LOC105371045A0A1W2PR82 267 aa23.7■■□□□ 1.38
PCCB-215ENST00000482086 RAPGEF2Q9Y4G8 1499 aa23.7■■□□□ 1.38
PCCB-215ENST00000482086 MAGI1Q96QZ7 1491 aaPredicted RBP23.67■■□□□ 1.38
PCCB-215ENST00000482086 FHAD1B1AJZ9 1412 aa23.66■■□□□ 1.38
PCCB-215ENST00000482086 ADAMTS12P58397 1594 aa23.65■■□□□ 1.38
PCCB-215ENST00000482086 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
PCCB-215ENST00000482086 UBTFP17480 764 aaKnown RBP23.61■■□□□ 1.37
PCCB-215ENST00000482086 EHMT2Q96KQ7 1210 aa23.59■■□□□ 1.37
PCCB-215ENST00000482086 TNIKQ9UKE5 1360 aa23.59■■□□□ 1.37
PCCB-215ENST00000482086 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
PCCB-215ENST00000482086 CHMP7Q8WUX9 453 aaPredicted RBP23.5■■□□□ 1.35
PCCB-215ENST00000482086 GRIN2AQ12879 1464 aa23.48■■□□□ 1.35
PCCB-215ENST00000482086 CTTNBP2Q8WZ74 1663 aa23.46■■□□□ 1.35
PCCB-215ENST00000482086 FBLN2P98095 1184 aa23.42■■□□□ 1.34
PCCB-215ENST00000482086 CHD1O14646 1710 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms