RNA–Protein interactions for RNA: ENST00000449164.1

KRT223P-202, Transcript of keratin 223 pseudogene, humanhuman

BASIC

Gene KRT223P, Length 1,292 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT223P-202ENST00000449164 NISCHQ9Y2I1 1504 aa38.21■■■■□ 3.71
KRT223P-202ENST00000449164 CCDC180Q9P1Z9 1646 aa34.43■■■■□ 3.1
KRT223P-202ENST00000449164 ABCC9O60706 1549 aa34.42■■■■□ 3.1
KRT223P-202ENST00000449164 RB1CC1Q8TDY2 1594 aa32.78■■■□□ 2.84
KRT223P-202ENST00000449164 NACADO15069 1562 aa32.51■■■□□ 2.79
KRT223P-202ENST00000449164 DNAJC5BQ9UF47 199 aa32.27■■■□□ 2.76
KRT223P-202ENST00000449164 DCAF8L2P0C7V8 631 aa32.25■■■□□ 2.75
KRT223P-202ENST00000449164 UNC13AQ9UPW8 1703 aa32.11■■■□□ 2.73
KRT223P-202ENST00000449164 MYO15BQ96JP2 1530 aa32■■■□□ 2.71
KRT223P-202ENST00000449164 PABPN1Q86U42 306 aaKnown RBP eCLIP31.97■■■□□ 2.71
KRT223P-202ENST00000449164 BICRAQ9NZM4 1560 aa31.79■■■□□ 2.68
KRT223P-202ENST00000449164 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
KRT223P-202ENST00000449164 DCAF1Q9Y4B6 1507 aa31.56■■■□□ 2.64
KRT223P-202ENST00000449164 SHROOM4Q9ULL8 1493 aa31.37■■■□□ 2.61
KRT223P-202ENST00000449164 SCRIBQ14160 1630 aa31.33■■■□□ 2.61
KRT223P-202ENST00000449164 CC2D2AQ9P2K1 1620 aa31.13■■■□□ 2.57
KRT223P-202ENST00000449164 EIF4G1Q04637 1599 aaKnown RBP31.03■■■□□ 2.56
KRT223P-202ENST00000449164 CECR2Q9BXF3 1484 aa31.02■■■□□ 2.56
KRT223P-202ENST00000449164 NCAPD3P42695 1498 aa29.95■■■□□ 2.39
KRT223P-202ENST00000449164 SMARCA4P51532 1647 aa29.87■■■□□ 2.37
KRT223P-202ENST00000449164 ATAD2BQ9ULI0 1458 aa29.86■■■□□ 2.37
KRT223P-202ENST00000449164 SMARCA2P51531 1590 aa29.82■■■□□ 2.36
KRT223P-202ENST00000449164 HMGXB3Q12766 1538 aa29.79■■■□□ 2.36
KRT223P-202ENST00000449164 ERCC6Q03468 1493 aa29.76■■■□□ 2.35
KRT223P-202ENST00000449164 DNAJC5Q9H3Z4 198 aa29.73■■■□□ 2.35
KRT223P-202ENST00000449164 CUX2O14529 1486 aa29.73■■■□□ 2.35
KRT223P-202ENST00000449164 BAZ1AQ9NRL2 1556 aaPredicted RBP29.69■■■□□ 2.34
KRT223P-202ENST00000449164 BAZ1BQ9UIG0 1483 aaKnown RBP29.61■■■□□ 2.33
KRT223P-202ENST00000449164 PEG3Q9GZU2 1588 aa29.56■■■□□ 2.32
KRT223P-202ENST00000449164 NESP48681 1621 aa29.54■■■□□ 2.32
KRT223P-202ENST00000449164 MROH2BQ7Z745 1585 aa29.43■■■□□ 2.3
KRT223P-202ENST00000449164 LAMC3Q9Y6N6 1575 aa29.37■■■□□ 2.29
KRT223P-202ENST00000449164 THOC2Q8NI27 1593 aaKnown RBP29.32■■■□□ 2.28
KRT223P-202ENST00000449164 KIF21AQ7Z4S6 1674 aa29.25■■■□□ 2.27
KRT223P-202ENST00000449164 PDS5BQ9NTI5 1447 aa29.16■■■□□ 2.26
KRT223P-202ENST00000449164 WIZO95785 1651 aa29.12■■■□□ 2.25
KRT223P-202ENST00000449164 CADPSQ9ULU8 1353 aa29.03■■■□□ 2.24
KRT223P-202ENST00000449164 MRC2Q9UBG0 1479 aa28.93■■■□□ 2.22
KRT223P-202ENST00000449164 WDR62O43379 1518 aa28.87■■■□□ 2.21
KRT223P-202ENST00000449164 CEP164Q9UPV0 1460 aa28.8■■■□□ 2.2
KRT223P-202ENST00000449164 RSF1Q96T23 1441 aaPredicted RBP28.76■■■□□ 2.19
KRT223P-202ENST00000449164 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
KRT223P-202ENST00000449164 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
KRT223P-202ENST00000449164 CFTRP13569 1480 aa28.7■■■□□ 2.18
KRT223P-202ENST00000449164 PRDM2Q13029 1718 aa28.58■■■□□ 2.17
KRT223P-202ENST00000449164 URB2Q14146 1524 aaKnown RBP28.5■■■□□ 2.15
KRT223P-202ENST00000449164 TRIM41Q8WV44 630 aa28.44■■■□□ 2.14
KRT223P-202ENST00000449164 CCDC88BA6NC98 1476 aa28.36■■■□□ 2.13
KRT223P-202ENST00000449164 OSCARQ8IYS5 282 aa28.29■■■□□ 2.12
KRT223P-202ENST00000449164 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
KRT223P-202ENST00000449164 TOPBP1Q92547 1522 aa28.19■■■□□ 2.1
KRT223P-202ENST00000449164 ZNF608Q9ULD9 1512 aaPredicted RBP28.15■■■□□ 2.1
KRT223P-202ENST00000449164 ABCC8Q09428 1581 aa28.14■■■□□ 2.1
KRT223P-202ENST00000449164 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
KRT223P-202ENST00000449164 EIF4G3O43432 1585 aaKnown RBP28.07■■■□□ 2.08
KRT223P-202ENST00000449164 RIMBP3CA6NJZ7 1639 aa28.03■■■□□ 2.08
KRT223P-202ENST00000449164 RIMBP3BA6NNM3 1639 aa28.03■■■□□ 2.08
KRT223P-202ENST00000449164 RIMBP3Q9UFD9 1639 aa28.03■■■□□ 2.08
KRT223P-202ENST00000449164 TARBP1Q13395 1621 aaKnown RBP27.97■■■□□ 2.07
KRT223P-202ENST00000449164 CHD1O14646 1710 aa27.93■■■□□ 2.06
KRT223P-202ENST00000449164 ARHGEF11O15085 1522 aa27.9■■■□□ 2.06
KRT223P-202ENST00000449164 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.06
KRT223P-202ENST00000449164 AQRO60306 1485 aaKnown RBP eCLIP27.88■■■□□ 2.05
KRT223P-202ENST00000449164 RAD54L2Q9Y4B4 1467 aa27.77■■■□□ 2.04
KRT223P-202ENST00000449164 SOGA1O94964 1423 aa27.75■■■□□ 2.03
KRT223P-202ENST00000449164 FGD5Q6ZNL6 1462 aa27.72■■■□□ 2.03
KRT223P-202ENST00000449164 WDR97A6NE52 1622 aa27.72■■■□□ 2.03
KRT223P-202ENST00000449164 FBLN2P98095 1184 aa27.72■■■□□ 2.03
KRT223P-202ENST00000449164 TDRD9Q8NDG6 1382 aaKnown RBP27.69■■■□□ 2.02
KRT223P-202ENST00000449164 CUX1P39880 1505 aa27.67■■■□□ 2.02
KRT223P-202ENST00000449164 CYB5RLQ6IPT4 315 aa27.64■■■□□ 2.02
KRT223P-202ENST00000449164 SNAPC4Q5SXM2 1469 aa27.64■■■□□ 2.01
KRT223P-202ENST00000449164 ARAP1Q96P48 1450 aa27.6■■■□□ 2.01
KRT223P-202ENST00000449164 MAGI1Q96QZ7 1491 aaPredicted RBP27.57■■■□□ 2
KRT223P-202ENST00000449164 SYNJ1O43426 1573 aa27.54■■■□□ 2
KRT223P-202ENST00000449164 GRIN2BQ13224 1484 aa27.54■■■□□ 2
KRT223P-202ENST00000449164 PBRM1Q86U86 1689 aa27.53■■■□□ 2
KRT223P-202ENST00000449164 CLASP1Q7Z460 1538 aa27.53■■■□□ 2
KRT223P-202ENST00000449164 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
KRT223P-202ENST00000449164 SYNJ2O15056 1496 aa27.46■■□□□ 1.99
KRT223P-202ENST00000449164 GAPVD1Q14C86 1478 aa27.43■■□□□ 1.98
KRT223P-202ENST00000449164 SUPT5HO00267 1087 aaKnown RBP27.41■■□□□ 1.98
KRT223P-202ENST00000449164 TRHP20396 242 aaPredicted RBP27.4■■□□□ 1.98
KRT223P-202ENST00000449164 ABCA5Q8WWZ7 1642 aa27.4■■□□□ 1.98
KRT223P-202ENST00000449164 ABCA10Q8WWZ4 1543 aa27.38■■□□□ 1.97
KRT223P-202ENST00000449164 BIVM-ERCC5R4GMW8 1640 aa27.27■■□□□ 1.96
KRT223P-202ENST00000449164 WRNQ14191 1432 aaPredicted RBP eCLIP27.25■■□□□ 1.95
KRT223P-202ENST00000449164 TOP2BQ02880 1626 aa27.23■■□□□ 1.95
KRT223P-202ENST00000449164 ADAMTS12P58397 1594 aa27.21■■□□□ 1.95
KRT223P-202ENST00000449164 GRIN2AQ12879 1464 aa27.19■■□□□ 1.94
KRT223P-202ENST00000449164 CEP170Q5SW79 1584 aa27.12■■□□□ 1.93
KRT223P-202ENST00000449164 ERCC6L2Q5T890 1561 aa27.08■■□□□ 1.93
KRT223P-202ENST00000449164 NUP160Q12769 1436 aa27.07■■□□□ 1.92
KRT223P-202ENST00000449164 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
KRT223P-202ENST00000449164 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
KRT223P-202ENST00000449164 SHROOM2Q13796 1616 aa27.03■■□□□ 1.92
KRT223P-202ENST00000449164 PRG4Q92954 1404 aaPredicted RBP26.83■■□□□ 1.89
KRT223P-202ENST00000449164 RUSC2Q8N2Y8 1516 aa26.83■■□□□ 1.89
KRT223P-202ENST00000449164 JPH4Q96JJ6 628 aa26.76■■□□□ 1.87
KRT223P-202ENST00000449164 KIF13AQ9H1H9 1805 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms