RNA–Protein interactions for RNA: ENST00000357089.8

UBXN11-202, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBXN11, Length 1,555 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-202ENST00000357089 NISCHQ9Y2I1 1504 aa34.55■■■■□ 3.12
UBXN11-202ENST00000357089 CCDC180Q9P1Z9 1646 aa30.42■■■□□ 2.46
UBXN11-202ENST00000357089 ABCC9O60706 1549 aa29.34■■■□□ 2.29
UBXN11-202ENST00000357089 ZCCHC6Q5VYS8 1495 aaKnown RBP28.89■■■□□ 2.22
UBXN11-202ENST00000357089 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.19
UBXN11-202ENST00000357089 DCAF1Q9Y4B6 1507 aa28.56■■■□□ 2.16
UBXN11-202ENST00000357089 NACADO15069 1562 aa28.49■■■□□ 2.15
UBXN11-202ENST00000357089 MYO15BQ96JP2 1530 aa28.46■■■□□ 2.15
UBXN11-202ENST00000357089 RB1CC1Q8TDY2 1594 aa28.4■■■□□ 2.14
UBXN11-202ENST00000357089 SCRIBQ14160 1630 aa27.89■■■□□ 2.06
UBXN11-202ENST00000357089 UNC13AQ9UPW8 1703 aa27.76■■■□□ 2.03
UBXN11-202ENST00000357089 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
UBXN11-202ENST00000357089 DNAJC5BQ9UF47 199 aa27.72■■■□□ 2.03
UBXN11-202ENST00000357089 PABPN1Q86U42 306 aaKnown RBP eCLIP27.54■■■□□ 29e-7■■■□□ 16.4
UBXN11-202ENST00000357089 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
UBXN11-202ENST00000357089 CECR2Q9BXF3 1484 aa26.88■■□□□ 1.89
UBXN11-202ENST00000357089 EIF4G1Q04637 1599 aaKnown RBP26.77■■□□□ 1.88
UBXN11-202ENST00000357089 BAZ1AQ9NRL2 1556 aaPredicted RBP26.74■■□□□ 1.87
UBXN11-202ENST00000357089 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
UBXN11-202ENST00000357089 MROH2BQ7Z745 1585 aa26.66■■□□□ 1.86
UBXN11-202ENST00000357089 RSF1Q96T23 1441 aaPredicted RBP26.55■■□□□ 1.84
UBXN11-202ENST00000357089 CC2D2AQ9P2K1 1620 aa26.53■■□□□ 1.84
UBXN11-202ENST00000357089 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
UBXN11-202ENST00000357089 WIZO95785 1651 aa26.41■■□□□ 1.82
UBXN11-202ENST00000357089 SMARCA2P51531 1590 aa26.38■■□□□ 1.81
UBXN11-202ENST00000357089 PEG3Q9GZU2 1588 aa26.38■■□□□ 1.81
UBXN11-202ENST00000357089 SUPT5HO00267 1087 aaKnown RBP26.38■■□□□ 1.81
UBXN11-202ENST00000357089 NCAPD3P42695 1498 aa26.29■■□□□ 1.8
UBXN11-202ENST00000357089 BAZ1BQ9UIG0 1483 aaKnown RBP26.23■■□□□ 1.79
UBXN11-202ENST00000357089 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
UBXN11-202ENST00000357089 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
UBXN11-202ENST00000357089 CCDC88BA6NC98 1476 aa25.85■■□□□ 1.73
UBXN11-202ENST00000357089 DNAJC5Q9H3Z4 198 aa25.82■■□□□ 1.72
UBXN11-202ENST00000357089 CADPSQ9ULU8 1353 aa25.57■■□□□ 1.68
UBXN11-202ENST00000357089 NESP48681 1621 aa25.55■■□□□ 1.68
UBXN11-202ENST00000357089 CFTRP13569 1480 aa25.53■■□□□ 1.68
UBXN11-202ENST00000357089 LAMC3Q9Y6N6 1575 aa25.51■■□□□ 1.67
UBXN11-202ENST00000357089 PRDM2Q13029 1718 aa25.35■■□□□ 1.65
UBXN11-202ENST00000357089 PDS5BQ9NTI5 1447 aa25.34■■□□□ 1.65
UBXN11-202ENST00000357089 FANCD2Q9BXW9 1451 aa25.3■■□□□ 1.64
UBXN11-202ENST00000357089 CUX2O14529 1486 aa25.25■■□□□ 1.63
UBXN11-202ENST00000357089 ERCC6Q03468 1493 aa25.24■■□□□ 1.63
UBXN11-202ENST00000357089 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
UBXN11-202ENST00000357089 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
UBXN11-202ENST00000357089 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
UBXN11-202ENST00000357089 MRC2Q9UBG0 1479 aa25.04■■□□□ 1.6
UBXN11-202ENST00000357089 WRNQ14191 1432 aaPredicted RBP eCLIP25.02■■□□□ 1.6
UBXN11-202ENST00000357089 URB2Q14146 1524 aaKnown RBP25.01■■□□□ 1.59
UBXN11-202ENST00000357089 THOC2Q8NI27 1593 aaKnown RBP24.99■■□□□ 1.59
UBXN11-202ENST00000357089 CUX1P39880 1505 aa24.97■■□□□ 1.59
UBXN11-202ENST00000357089 DNMBPQ6XZF7 1577 aa24.95■■□□□ 1.58
UBXN11-202ENST00000357089 TOPBP1Q92547 1522 aa24.95■■□□□ 1.58
UBXN11-202ENST00000357089 SYNJ1O43426 1573 aa24.94■■□□□ 1.58
UBXN11-202ENST00000357089 WDR62O43379 1518 aa24.93■■□□□ 1.58
UBXN11-202ENST00000357089 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
UBXN11-202ENST00000357089 TOP2BQ02880 1626 aa24.89■■□□□ 1.57
UBXN11-202ENST00000357089 BIVM-ERCC5R4GMW8 1640 aa24.87■■□□□ 1.57
UBXN11-202ENST00000357089 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
UBXN11-202ENST00000357089 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
UBXN11-202ENST00000357089 POLA1P09884 1462 aaPredicted RBP24.78■■□□□ 1.56
UBXN11-202ENST00000357089 SOGA1O94964 1423 aa24.7■■□□□ 1.54
UBXN11-202ENST00000357089 RAD54L2Q9Y4B4 1467 aa24.69■■□□□ 1.54
UBXN11-202ENST00000357089 IFT140Q96RY7 1462 aa24.64■■□□□ 1.53
UBXN11-202ENST00000357089 TARBP1Q13395 1621 aaKnown RBP24.62■■□□□ 1.53
UBXN11-202ENST00000357089 ABCA10Q8WWZ4 1543 aa24.57■■□□□ 1.52
UBXN11-202ENST00000357089 WDR97A6NE52 1622 aa24.54■■□□□ 1.52
UBXN11-202ENST00000357089 ZNF608Q9ULD9 1512 aaPredicted RBP24.52■■□□□ 1.52
UBXN11-202ENST00000357089 TDRD9Q8NDG6 1382 aaKnown RBP24.51■■□□□ 1.51
UBXN11-202ENST00000357089 AQRO60306 1485 aaKnown RBP eCLIP24.46■■□□□ 1.514e-14■■■■■ 52.8
UBXN11-202ENST00000357089 KIF27Q86VH2 1401 aa24.45■■□□□ 1.51
UBXN11-202ENST00000357089 RUSC2Q8N2Y8 1516 aa24.44■■□□□ 1.5
UBXN11-202ENST00000357089 EIF4G3O43432 1585 aaKnown RBP24.43■■□□□ 1.5
UBXN11-202ENST00000357089 ABCA5Q8WWZ7 1642 aa24.42■■□□□ 1.5
UBXN11-202ENST00000357089 GAPVD1Q14C86 1478 aa24.41■■□□□ 1.5
UBXN11-202ENST00000357089 FAM9AQ8IZU1 332 aaPredicted RBP24.38■■□□□ 1.49
UBXN11-202ENST00000357089 EEA1Q15075 1411 aa24.33■■□□□ 1.49
UBXN11-202ENST00000357089 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
UBXN11-202ENST00000357089 PBRM1Q86U86 1689 aa24.31■■□□□ 1.48
UBXN11-202ENST00000357089 IGF1RP08069 1367 aa24.29■■□□□ 1.48
UBXN11-202ENST00000357089 ERICH3Q5RHP9 1530 aa24.28■■□□□ 1.48
UBXN11-202ENST00000357089 CSRNP3Q8WYN3 585 aa24.26■■□□□ 1.47
UBXN11-202ENST00000357089 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
UBXN11-202ENST00000357089 MAGI1Q96QZ7 1491 aaPredicted RBP24.18■■□□□ 1.46
UBXN11-202ENST00000357089 CUL7Q14999 1698 aa24.17■■□□□ 1.46
UBXN11-202ENST00000357089 CARMIL1Q5VZK9 1371 aa24.16■■□□□ 1.46
UBXN11-202ENST00000357089 ADAMTS12P58397 1594 aa24.14■■□□□ 1.46
UBXN11-202ENST00000357089 FHAD1B1AJZ9 1412 aa24.14■■□□□ 1.46
UBXN11-202ENST00000357089 PRXQ9BXM0 1461 aa24.11■■□□□ 1.45
UBXN11-202ENST00000357089 FBLN2P98095 1184 aa24.11■■□□□ 1.45
UBXN11-202ENST00000357089 SYNJ2O15056 1496 aa24.09■■□□□ 1.45
UBXN11-202ENST00000357089 CHMP7Q8WUX9 453 aaPredicted RBP24.08■■□□□ 1.45
UBXN11-202ENST00000357089 EHMT2Q96KQ7 1210 aa24.08■■□□□ 1.44
UBXN11-202ENST00000357089 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
UBXN11-202ENST00000357089 KIF21BO75037 1637 aa24.03■■□□□ 1.44
UBXN11-202ENST00000357089 GRIN2AQ12879 1464 aa24.02■■□□□ 1.44
UBXN11-202ENST00000357089 CHD1O14646 1710 aa24.01■■□□□ 1.43
UBXN11-202ENST00000357089 GOLGA3Q08378 1498 aa23.97■■□□□ 1.43
UBXN11-202ENST00000357089 OSCARQ8IYS5 282 aa23.95■■□□□ 1.43
UBXN11-202ENST00000357089 LOC105371045A0A1W2PR82 267 aa23.93■■□□□ 1.42
UBXN11-202ENST00000357089 UBTFP17480 764 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms