Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH8P55286 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH8P55286 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH8P55286 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CDH8P55286 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH8P55286 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH8P55286 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH8P55286 AC104306.2-201ENST00000451877 341 ntBASIC15.74■□□□□ 0.11
CDH8P55286 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH8P55286 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH8P55286 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH8P55286 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH8P55286 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH8P55286 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH8P55286 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
CDH8P55286 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH8P55286 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH8P55286 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH8P55286 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH8P55286 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH8P55286 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH8P55286 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH8P55286 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH8P55286 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH8P55286 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
CDH8P55286 KHSRPP1-201ENST00000427983 1768 ntBASIC15.74■□□□□ 0.11
CDH8P55286 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH8P55286 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH8P55286 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.74■□□□□ 0.11
CDH8P55286 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH8P55286 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDH8P55286 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH8P55286 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH8P55286 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH8P55286 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH8P55286 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDH8P55286 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH8P55286 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH8P55286 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH8P55286 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
CDH8P55286 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDH8P55286 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.73■□□□□ 0.11
CDH8P55286 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.73■□□□□ 0.11
CDH8P55286 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH8P55286 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH8P55286 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 RNMTL1P1-201ENST00000454103 560 ntBASIC15.73■□□□□ 0.11
CDH8P55286 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH8P55286 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH8P55286 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH8P55286 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH8P55286 AC100827.2-201ENST00000563214 1194 ntBASIC15.73■□□□□ 0.11
CDH8P55286 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 AL118558.3-201ENST00000607414 1079 ntBASIC15.73■□□□□ 0.11
CDH8P55286 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH8P55286 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDH8P55286 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH8P55286 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH8P55286 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH8P55286 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH8P55286 KRT8P28-201ENST00000433288 1390 ntBASIC15.73■□□□□ 0.11
CDH8P55286 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH8P55286 MYADML-201ENST00000474610 2147 ntBASIC15.73■□□□□ 0.11
CDH8P55286 AC023908.3-201ENST00000564211 3047 ntBASIC15.73■□□□□ 0.11
CDH8P55286 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH8P55286 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH8P55286 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH8P55286 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH8P55286 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH8P55286 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH8P55286 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH8P55286 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH8P55286 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH8P55286 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH8P55286 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH8P55286 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH8P55286 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH8P55286 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH8P55286 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH8P55286 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.72■□□□□ 0.11
CDH8P55286 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH8P55286 FAM8A2P-201ENST00000528813 1142 ntBASIC15.72■□□□□ 0.11
CDH8P55286 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH8P55286 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms