RNA–Protein interactions for RNA: ENST00000379404.5

SMS-201, Transcript of spermine synthase, humanhuman

TSL 3 BASIC

Gene SMS, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-201ENST00000379404 NISCHQ9Y2I1 1504 aa36.24■■■■□ 3.39
SMS-201ENST00000379404 CCDC180Q9P1Z9 1646 aa32.23■■■□□ 2.75
SMS-201ENST00000379404 ABCC9O60706 1549 aa31.76■■■□□ 2.68
SMS-201ENST00000379404 RB1CC1Q8TDY2 1594 aa30.44■■■□□ 2.46
SMS-201ENST00000379404 NACADO15069 1562 aa30.38■■■□□ 2.45
SMS-201ENST00000379404 DCAF8L2P0C7V8 631 aa30.3■■■□□ 2.44
SMS-201ENST00000379404 MYO15BQ96JP2 1530 aa30.19■■■□□ 2.42
SMS-201ENST00000379404 ZCCHC6Q5VYS8 1495 aaKnown RBP30.12■■■□□ 2.41
SMS-201ENST00000379404 DCAF1Q9Y4B6 1507 aa29.98■■■□□ 2.39
SMS-201ENST00000379404 UNC13AQ9UPW8 1703 aa29.77■■■□□ 2.36
SMS-201ENST00000379404 PABPN1Q86U42 306 aaKnown RBP eCLIP29.69■■■□□ 2.34
SMS-201ENST00000379404 BICRAQ9NZM4 1560 aa29.62■■■□□ 2.33
SMS-201ENST00000379404 DNAJC5BQ9UF47 199 aa29.49■■■□□ 2.31
SMS-201ENST00000379404 SCRIBQ14160 1630 aa29.38■■■□□ 2.29
SMS-201ENST00000379404 SHROOM4Q9ULL8 1493 aa29.22■■■□□ 2.27
SMS-201ENST00000379404 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
SMS-201ENST00000379404 CC2D2AQ9P2K1 1620 aa28.72■■■□□ 2.19
SMS-201ENST00000379404 CECR2Q9BXF3 1484 aa28.57■■■□□ 2.16
SMS-201ENST00000379404 SMARCA4P51532 1647 aa28.12■■■□□ 2.09
SMS-201ENST00000379404 NCAPD3P42695 1498 aa28.1■■■□□ 2.09
SMS-201ENST00000379404 ATAD2BQ9ULI0 1458 aa28.06■■■□□ 2.08
SMS-201ENST00000379404 BAZ1AQ9NRL2 1556 aaPredicted RBP28.05■■■□□ 2.08
SMS-201ENST00000379404 SMARCA2P51531 1590 aa27.95■■■□□ 2.07
SMS-201ENST00000379404 MROH2BQ7Z745 1585 aa27.93■■■□□ 2.06
SMS-201ENST00000379404 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
SMS-201ENST00000379404 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
SMS-201ENST00000379404 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.03
SMS-201ENST00000379404 WIZO95785 1651 aa27.59■■■□□ 2.01
SMS-201ENST00000379404 RSF1Q96T23 1441 aaPredicted RBP27.55■■■□□ 2
SMS-201ENST00000379404 NESP48681 1621 aa27.46■■□□□ 1.99
SMS-201ENST00000379404 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
SMS-201ENST00000379404 LAMC3Q9Y6N6 1575 aa27.31■■□□□ 1.96
SMS-201ENST00000379404 TOP2AP11388 1531 aaKnown RBP27.26■■□□□ 1.96
SMS-201ENST00000379404 CADPSQ9ULU8 1353 aa27.25■■□□□ 1.95
SMS-201ENST00000379404 CUX2O14529 1486 aa27.17■■□□□ 1.94
SMS-201ENST00000379404 PDS5BQ9NTI5 1447 aa27.15■■□□□ 1.94
SMS-201ENST00000379404 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
SMS-201ENST00000379404 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
SMS-201ENST00000379404 CFTRP13569 1480 aa27.05■■□□□ 1.92
SMS-201ENST00000379404 CCDC88BA6NC98 1476 aa27■■□□□ 1.91
SMS-201ENST00000379404 FANCD2Q9BXW9 1451 aa26.89■■□□□ 1.9
SMS-201ENST00000379404 MRC2Q9UBG0 1479 aa26.87■■□□□ 1.89
SMS-201ENST00000379404 CEP164Q9UPV0 1460 aa26.85■■□□□ 1.89
SMS-201ENST00000379404 WDR62O43379 1518 aa26.81■■□□□ 1.88
SMS-201ENST00000379404 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
SMS-201ENST00000379404 URB2Q14146 1524 aaKnown RBP26.67■■□□□ 1.86
SMS-201ENST00000379404 DNAJC5Q9H3Z4 198 aa26.67■■□□□ 1.86
SMS-201ENST00000379404 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
SMS-201ENST00000379404 TOPBP1Q92547 1522 aa26.45■■□□□ 1.83
SMS-201ENST00000379404 ABCC8Q09428 1581 aa26.42■■□□□ 1.82
SMS-201ENST00000379404 DNMBPQ6XZF7 1577 aa26.38■■□□□ 1.81
SMS-201ENST00000379404 IFT140Q96RY7 1462 aa26.32■■□□□ 1.8
SMS-201ENST00000379404 ZNF608Q9ULD9 1512 aaPredicted RBP26.26■■□□□ 1.79
SMS-201ENST00000379404 POLA1P09884 1462 aaPredicted RBP26.23■■□□□ 1.79
SMS-201ENST00000379404 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
SMS-201ENST00000379404 CUX1P39880 1505 aa26.19■■□□□ 1.78
SMS-201ENST00000379404 RAD54L2Q9Y4B4 1467 aa26.13■■□□□ 1.77
SMS-201ENST00000379404 SOGA1O94964 1423 aa26.12■■□□□ 1.77
SMS-201ENST00000379404 FGD5Q6ZNL6 1462 aa26.11■■□□□ 1.77
SMS-201ENST00000379404 AQRO60306 1485 aaKnown RBP eCLIP26.1■■□□□ 1.77
SMS-201ENST00000379404 EIF4G3O43432 1585 aaKnown RBP26.08■■□□□ 1.77
SMS-201ENST00000379404 OSCARQ8IYS5 282 aa26.05■■□□□ 1.76
SMS-201ENST00000379404 TDRD9Q8NDG6 1382 aaKnown RBP26■■□□□ 1.75
SMS-201ENST00000379404 WRNQ14191 1432 aaPredicted RBP eCLIP25.93■■□□□ 1.74
SMS-201ENST00000379404 WDR97A6NE52 1622 aa25.92■■□□□ 1.74
SMS-201ENST00000379404 TOP2BQ02880 1626 aa25.9■■□□□ 1.74
SMS-201ENST00000379404 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
SMS-201ENST00000379404 BIVM-ERCC5R4GMW8 1640 aa25.88■■□□□ 1.73
SMS-201ENST00000379404 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
SMS-201ENST00000379404 GRIN2BQ13224 1484 aa25.81■■□□□ 1.72
SMS-201ENST00000379404 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
SMS-201ENST00000379404 SNAPC4Q5SXM2 1469 aa25.79■■□□□ 1.72
SMS-201ENST00000379404 CHD1O14646 1710 aa25.79■■□□□ 1.72
SMS-201ENST00000379404 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
SMS-201ENST00000379404 MAGI1Q96QZ7 1491 aaPredicted RBP25.76■■□□□ 1.71
SMS-201ENST00000379404 FBLN2P98095 1184 aa25.74■■□□□ 1.71
SMS-201ENST00000379404 PBRM1Q86U86 1689 aa25.7■■□□□ 1.7
SMS-201ENST00000379404 SYNJ2O15056 1496 aa25.67■■□□□ 1.7
SMS-201ENST00000379404 CHMP7Q8WUX9 453 aaPredicted RBP25.67■■□□□ 1.7
SMS-201ENST00000379404 RIMBP3CA6NJZ7 1639 aa25.61■■□□□ 1.69
SMS-201ENST00000379404 RIMBP3BA6NNM3 1639 aa25.61■■□□□ 1.69
SMS-201ENST00000379404 RIMBP3Q9UFD9 1639 aa25.61■■□□□ 1.69
SMS-201ENST00000379404 ARHGEF11O15085 1522 aa25.59■■□□□ 1.69
SMS-201ENST00000379404 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
SMS-201ENST00000379404 CLASP1Q7Z460 1538 aa25.57■■□□□ 1.68
SMS-201ENST00000379404 ERICH3Q5RHP9 1530 aa25.54■■□□□ 1.68
SMS-201ENST00000379404 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
SMS-201ENST00000379404 FHAD1B1AJZ9 1412 aa25.49■■□□□ 1.67
SMS-201ENST00000379404 GRIN2AQ12879 1464 aa25.48■■□□□ 1.67
SMS-201ENST00000379404 NUP160Q12769 1436 aa25.42■■□□□ 1.66
SMS-201ENST00000379404 IGF1RP08069 1367 aa25.4■■□□□ 1.66
SMS-201ENST00000379404 ARAP1Q96P48 1450 aa25.4■■□□□ 1.66
SMS-201ENST00000379404 KIF27Q86VH2 1401 aa25.39■■□□□ 1.66
SMS-201ENST00000379404 CYB5RLQ6IPT4 315 aa25.39■■□□□ 1.66
SMS-201ENST00000379404 CEP170Q5SW79 1584 aa25.37■■□□□ 1.65
SMS-201ENST00000379404 SHROOM2Q13796 1616 aa25.23■■□□□ 1.63
SMS-201ENST00000379404 CUL7Q14999 1698 aa25.22■■□□□ 1.63
SMS-201ENST00000379404 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
SMS-201ENST00000379404 CARMIL1Q5VZK9 1371 aa25.19■■□□□ 1.62
SMS-201ENST00000379404 RUSC2Q8N2Y8 1516 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms