RNA–Protein interactions for RNA: ENST00000427983.2

KHSRPP1-201, Transcript of KH-type splicing regulatory protein pseudogene 1, humanhuman

BASIC

Gene KHSRPP1, Length 1,768 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRPP1-201ENST00000427983 NISCHQ9Y2I1 1504 aa34.17■■■■□ 3.06
KHSRPP1-201ENST00000427983 CCDC180Q9P1Z9 1646 aa30.07■■■□□ 2.4
KHSRPP1-201ENST00000427983 ZCCHC6Q5VYS8 1495 aaKnown RBP28.67■■■□□ 2.18
KHSRPP1-201ENST00000427983 ABCC9O60706 1549 aa28.4■■■□□ 2.14
KHSRPP1-201ENST00000427983 DCAF1Q9Y4B6 1507 aa28.35■■■□□ 2.13
KHSRPP1-201ENST00000427983 MYO15BQ96JP2 1530 aa28.11■■■□□ 2.09
KHSRPP1-201ENST00000427983 DCAF8L2P0C7V8 631 aa28.03■■■□□ 2.08
KHSRPP1-201ENST00000427983 NACADO15069 1562 aa27.98■■■□□ 2.07
KHSRPP1-201ENST00000427983 RB1CC1Q8TDY2 1594 aa27.78■■■□□ 2.04
KHSRPP1-201ENST00000427983 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
KHSRPP1-201ENST00000427983 SCRIBQ14160 1630 aa27.44■■□□□ 1.98
KHSRPP1-201ENST00000427983 UNC13AQ9UPW8 1703 aa27.34■■□□□ 1.97
KHSRPP1-201ENST00000427983 BICRAQ9NZM4 1560 aa26.95■■□□□ 1.91
KHSRPP1-201ENST00000427983 PABPN1Q86U42 306 aaKnown RBP eCLIP26.63■■□□□ 1.85
KHSRPP1-201ENST00000427983 CECR2Q9BXF3 1484 aa26.49■■□□□ 1.83
KHSRPP1-201ENST00000427983 BAZ1AQ9NRL2 1556 aaPredicted RBP26.43■■□□□ 1.82
KHSRPP1-201ENST00000427983 SMARCA4P51532 1647 aa26.37■■□□□ 1.81
KHSRPP1-201ENST00000427983 MROH2BQ7Z745 1585 aa26.35■■□□□ 1.81
KHSRPP1-201ENST00000427983 RSF1Q96T23 1441 aaPredicted RBP26.35■■□□□ 1.81
KHSRPP1-201ENST00000427983 SUPT5HO00267 1087 aaKnown RBP26.3■■□□□ 1.8
KHSRPP1-201ENST00000427983 WIZO95785 1651 aa26.17■■□□□ 1.78
KHSRPP1-201ENST00000427983 EIF4G1Q04637 1599 aaKnown RBP26.13■■□□□ 1.77
KHSRPP1-201ENST00000427983 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
KHSRPP1-201ENST00000427983 SMARCA2P51531 1590 aa25.96■■□□□ 1.75
KHSRPP1-201ENST00000427983 ATAD2BQ9ULI0 1458 aa25.92■■□□□ 1.74
KHSRPP1-201ENST00000427983 TOP2AP11388 1531 aaKnown RBP25.91■■□□□ 1.74
KHSRPP1-201ENST00000427983 CC2D2AQ9P2K1 1620 aa25.81■■□□□ 1.72
KHSRPP1-201ENST00000427983 HMGXB3Q12766 1538 aa25.78■■□□□ 1.72
KHSRPP1-201ENST00000427983 NCAPD3P42695 1498 aa25.77■■□□□ 1.72
KHSRPP1-201ENST00000427983 BAZ1BQ9UIG0 1483 aaKnown RBP25.76■■□□□ 1.71
KHSRPP1-201ENST00000427983 CCDC88BA6NC98 1476 aa25.56■■□□□ 1.68
KHSRPP1-201ENST00000427983 DNAJC5BQ9UF47 199 aa25.21■■□□□ 1.63
KHSRPP1-201ENST00000427983 PRDM2Q13029 1718 aa25.2■■□□□ 1.63
KHSRPP1-201ENST00000427983 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
KHSRPP1-201ENST00000427983 CFTRP13569 1480 aa25.12■■□□□ 1.61
KHSRPP1-201ENST00000427983 CADPSQ9ULU8 1353 aa25.04■■□□□ 1.6
KHSRPP1-201ENST00000427983 LAMC3Q9Y6N6 1575 aa24.99■■□□□ 1.59
KHSRPP1-201ENST00000427983 ABCC8Q09428 1581 aa24.95■■□□□ 1.58
KHSRPP1-201ENST00000427983 NESP48681 1621 aa24.88■■□□□ 1.57
KHSRPP1-201ENST00000427983 WRNQ14191 1432 aaPredicted RBP eCLIP24.81■■□□□ 1.56
KHSRPP1-201ENST00000427983 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
KHSRPP1-201ENST00000427983 SYNJ1O43426 1573 aa24.78■■□□□ 1.56
KHSRPP1-201ENST00000427983 BIVM-ERCC5R4GMW8 1640 aa24.77■■□□□ 1.56
KHSRPP1-201ENST00000427983 FANCD2Q9BXW9 1451 aa24.77■■□□□ 1.56
KHSRPP1-201ENST00000427983 TOP2BQ02880 1626 aa24.74■■□□□ 1.55
KHSRPP1-201ENST00000427983 KIF21AQ7Z4S6 1674 aa24.73■■□□□ 1.55
KHSRPP1-201ENST00000427983 PDS5BQ9NTI5 1447 aa24.71■■□□□ 1.55
KHSRPP1-201ENST00000427983 CUX1P39880 1505 aa24.67■■□□□ 1.54
KHSRPP1-201ENST00000427983 CEP164Q9UPV0 1460 aa24.66■■□□□ 1.54
KHSRPP1-201ENST00000427983 DNMBPQ6XZF7 1577 aa24.58■■□□□ 1.53
KHSRPP1-201ENST00000427983 TOPBP1Q92547 1522 aa24.5■■□□□ 1.51
KHSRPP1-201ENST00000427983 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
KHSRPP1-201ENST00000427983 FGD5Q6ZNL6 1462 aa24.43■■□□□ 1.5
KHSRPP1-201ENST00000427983 MRC2Q9UBG0 1479 aa24.43■■□□□ 1.5
KHSRPP1-201ENST00000427983 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
KHSRPP1-201ENST00000427983 EEA1Q15075 1411 aa24.38■■□□□ 1.49
KHSRPP1-201ENST00000427983 SOGA1O94964 1423 aa24.37■■□□□ 1.49
KHSRPP1-201ENST00000427983 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
KHSRPP1-201ENST00000427983 WDR62O43379 1518 aa24.36■■□□□ 1.49
KHSRPP1-201ENST00000427983 POLA1P09884 1462 aaPredicted RBP24.35■■□□□ 1.49
KHSRPP1-201ENST00000427983 RUSC2Q8N2Y8 1516 aa24.31■■□□□ 1.48
KHSRPP1-201ENST00000427983 WDR97A6NE52 1622 aa24.3■■□□□ 1.48
KHSRPP1-201ENST00000427983 FAM9AQ8IZU1 332 aaPredicted RBP24.26■■□□□ 1.47
KHSRPP1-201ENST00000427983 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
KHSRPP1-201ENST00000427983 TARBP1Q13395 1621 aaKnown RBP24.22■■□□□ 1.47
KHSRPP1-201ENST00000427983 RAD54L2Q9Y4B4 1467 aa24.22■■□□□ 1.47
KHSRPP1-201ENST00000427983 KIF27Q86VH2 1401 aa24.21■■□□□ 1.47
KHSRPP1-201ENST00000427983 CUX2O14529 1486 aa24.18■■□□□ 1.46
KHSRPP1-201ENST00000427983 CSRNP3Q8WYN3 585 aa24.16■■□□□ 1.46
KHSRPP1-201ENST00000427983 KIF21BO75037 1637 aa24.13■■□□□ 1.45
KHSRPP1-201ENST00000427983 ABCA5Q8WWZ7 1642 aa24.13■■□□□ 1.45
KHSRPP1-201ENST00000427983 IFT140Q96RY7 1462 aa24.09■■□□□ 1.45
KHSRPP1-201ENST00000427983 LOC105371045A0A1W2PR82 267 aa24.08■■□□□ 1.44
KHSRPP1-201ENST00000427983 PRXQ9BXM0 1461 aa24.02■■□□□ 1.44
KHSRPP1-201ENST00000427983 PBRM1Q86U86 1689 aa24.01■■□□□ 1.43
KHSRPP1-201ENST00000427983 ERICH3Q5RHP9 1530 aa24.01■■□□□ 1.43
KHSRPP1-201ENST00000427983 GOLGA3Q08378 1498 aa24■■□□□ 1.43
KHSRPP1-201ENST00000427983 IGF1RP08069 1367 aa23.99■■□□□ 1.43
KHSRPP1-201ENST00000427983 CUL7Q14999 1698 aa23.99■■□□□ 1.43
KHSRPP1-201ENST00000427983 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
KHSRPP1-201ENST00000427983 TDRD9Q8NDG6 1382 aaKnown RBP23.96■■□□□ 1.43
KHSRPP1-201ENST00000427983 EIF4G3O43432 1585 aaKnown RBP23.93■■□□□ 1.42
KHSRPP1-201ENST00000427983 RAPGEF2Q9Y4G8 1499 aa23.92■■□□□ 1.42
KHSRPP1-201ENST00000427983 ZNF608Q9ULD9 1512 aaPredicted RBP23.92■■□□□ 1.42
KHSRPP1-201ENST00000427983 AQRO60306 1485 aaKnown RBP eCLIP23.88■■□□□ 1.41
KHSRPP1-201ENST00000427983 CARMIL1Q5VZK9 1371 aa23.87■■□□□ 1.41
KHSRPP1-201ENST00000427983 TNIKQ9UKE5 1360 aa23.85■■□□□ 1.41
KHSRPP1-201ENST00000427983 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
KHSRPP1-201ENST00000427983 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
KHSRPP1-201ENST00000427983 ADAMTS12P58397 1594 aa23.81■■□□□ 1.4
KHSRPP1-201ENST00000427983 UBTFP17480 764 aaKnown RBP23.76■■□□□ 1.39
KHSRPP1-201ENST00000427983 CTTNBP2Q8WZ74 1663 aa23.73■■□□□ 1.39
KHSRPP1-201ENST00000427983 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
KHSRPP1-201ENST00000427983 MAGI1Q96QZ7 1491 aaPredicted RBP23.71■■□□□ 1.39
KHSRPP1-201ENST00000427983 SNAPC4Q5SXM2 1469 aa23.7■■□□□ 1.38
KHSRPP1-201ENST00000427983 CEP162Q5TB80 1403 aa23.69■■□□□ 1.38
KHSRPP1-201ENST00000427983 SYNJ2O15056 1496 aa23.59■■□□□ 1.37
KHSRPP1-201ENST00000427983 GRIN2AQ12879 1464 aa23.57■■□□□ 1.36
KHSRPP1-201ENST00000427983 CLIP1P30622 1438 aa23.56■■□□□ 1.36
KHSRPP1-201ENST00000427983 CHD1O14646 1710 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms