RNA–Protein interactions for RNA: ENST00000338516.7

PAX4-201, Transcript of paired box 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PAX4, Length 1,085 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4-201ENST00000338516 NISCHQ9Y2I1 1504 aa36.44■■■■□ 3.42
PAX4-201ENST00000338516 CCDC180Q9P1Z9 1646 aa32.49■■■□□ 2.79
PAX4-201ENST00000338516 ABCC9O60706 1549 aa32.1■■■□□ 2.73
PAX4-201ENST00000338516 RB1CC1Q8TDY2 1594 aa30.71■■■□□ 2.51
PAX4-201ENST00000338516 NACADO15069 1562 aa30.61■■■□□ 2.49
PAX4-201ENST00000338516 DCAF8L2P0C7V8 631 aa30.47■■■□□ 2.47
PAX4-201ENST00000338516 MYO15BQ96JP2 1530 aa30.35■■■□□ 2.45
PAX4-201ENST00000338516 ZCCHC6Q5VYS8 1495 aaKnown RBP30.32■■■□□ 2.44
PAX4-201ENST00000338516 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
PAX4-201ENST00000338516 UNC13AQ9UPW8 1703 aa30.04■■■□□ 2.4
PAX4-201ENST00000338516 PABPN1Q86U42 306 aaKnown RBP eCLIP29.93■■■□□ 2.38
PAX4-201ENST00000338516 BICRAQ9NZM4 1560 aa29.87■■■□□ 2.37
PAX4-201ENST00000338516 DNAJC5BQ9UF47 199 aa29.75■■■□□ 2.35
PAX4-201ENST00000338516 SCRIBQ14160 1630 aa29.66■■■□□ 2.34
PAX4-201ENST00000338516 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
PAX4-201ENST00000338516 EIF4G1Q04637 1599 aaKnown RBP29.06■■■□□ 2.24
PAX4-201ENST00000338516 CC2D2AQ9P2K1 1620 aa29.01■■■□□ 2.23
PAX4-201ENST00000338516 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
PAX4-201ENST00000338516 SMARCA4P51532 1647 aa28.33■■■□□ 2.13
PAX4-201ENST00000338516 NCAPD3P42695 1498 aa28.27■■■□□ 2.12
PAX4-201ENST00000338516 ATAD2BQ9ULI0 1458 aa28.26■■■□□ 2.11
PAX4-201ENST00000338516 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
PAX4-201ENST00000338516 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
PAX4-201ENST00000338516 HMGXB3Q12766 1538 aa28.11■■■□□ 2.09
PAX4-201ENST00000338516 MROH2BQ7Z745 1585 aa28.11■■■□□ 2.09
PAX4-201ENST00000338516 PEG3Q9GZU2 1588 aa28.07■■■□□ 2.08
PAX4-201ENST00000338516 BAZ1BQ9UIG0 1483 aaKnown RBP27.98■■■□□ 2.07
PAX4-201ENST00000338516 WIZO95785 1651 aa27.77■■■□□ 2.04
PAX4-201ENST00000338516 NESP48681 1621 aa27.72■■■□□ 2.03
PAX4-201ENST00000338516 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
PAX4-201ENST00000338516 ERCC6Q03468 1493 aa27.64■■■□□ 2.01
PAX4-201ENST00000338516 LAMC3Q9Y6N6 1575 aa27.55■■■□□ 2
PAX4-201ENST00000338516 CUX2O14529 1486 aa27.46■■□□□ 1.99
PAX4-201ENST00000338516 TOP2AP11388 1531 aaKnown RBP27.45■■□□□ 1.98
PAX4-201ENST00000338516 CADPSQ9ULU8 1353 aa27.42■■□□□ 1.98
PAX4-201ENST00000338516 THOC2Q8NI27 1593 aaKnown RBP27.35■■□□□ 1.97
PAX4-201ENST00000338516 PDS5BQ9NTI5 1447 aa27.35■■□□□ 1.97
PAX4-201ENST00000338516 KIF21AQ7Z4S6 1674 aa27.34■■□□□ 1.97
PAX4-201ENST00000338516 CFTRP13569 1480 aa27.22■■□□□ 1.95
PAX4-201ENST00000338516 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
PAX4-201ENST00000338516 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
PAX4-201ENST00000338516 FANCD2Q9BXW9 1451 aa27.12■■□□□ 1.93
PAX4-201ENST00000338516 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
PAX4-201ENST00000338516 WDR62O43379 1518 aa27.06■■□□□ 1.92
PAX4-201ENST00000338516 DNAJC5Q9H3Z4 198 aa26.95■■□□□ 1.9
PAX4-201ENST00000338516 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
PAX4-201ENST00000338516 URB2Q14146 1524 aaKnown RBP26.9■■□□□ 1.9
PAX4-201ENST00000338516 SUPT5HO00267 1087 aaKnown RBP26.7■■□□□ 1.86
PAX4-201ENST00000338516 TOPBP1Q92547 1522 aa26.66■■□□□ 1.86
PAX4-201ENST00000338516 DNMBPQ6XZF7 1577 aa26.59■■□□□ 1.85
PAX4-201ENST00000338516 ABCC8Q09428 1581 aa26.57■■□□□ 1.84
PAX4-201ENST00000338516 IFT140Q96RY7 1462 aa26.54■■□□□ 1.84
PAX4-201ENST00000338516 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
PAX4-201ENST00000338516 POLA1P09884 1462 aaPredicted RBP26.43■■□□□ 1.82
PAX4-201ENST00000338516 TARBP1Q13395 1621 aaKnown RBP26.41■■□□□ 1.82
PAX4-201ENST00000338516 CUX1P39880 1505 aa26.38■■□□□ 1.81
PAX4-201ENST00000338516 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
PAX4-201ENST00000338516 RAD54L2Q9Y4B4 1467 aa26.32■■□□□ 1.8
PAX4-201ENST00000338516 FGD5Q6ZNL6 1462 aa26.31■■□□□ 1.8
PAX4-201ENST00000338516 AQRO60306 1485 aaKnown RBP eCLIP26.29■■□□□ 1.8
PAX4-201ENST00000338516 SOGA1O94964 1423 aa26.27■■□□□ 1.8
PAX4-201ENST00000338516 OSCARQ8IYS5 282 aa26.23■■□□□ 1.79
PAX4-201ENST00000338516 TDRD9Q8NDG6 1382 aaKnown RBP26.19■■□□□ 1.78
PAX4-201ENST00000338516 WDR97A6NE52 1622 aa26.13■■□□□ 1.77
PAX4-201ENST00000338516 WRNQ14191 1432 aaPredicted RBP eCLIP26.06■■□□□ 1.76
PAX4-201ENST00000338516 SYNJ1O43426 1573 aa26.06■■□□□ 1.76
PAX4-201ENST00000338516 TOP2BQ02880 1626 aa26.05■■□□□ 1.76
PAX4-201ENST00000338516 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
PAX4-201ENST00000338516 CHD1O14646 1710 aa26.05■■□□□ 1.76
PAX4-201ENST00000338516 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
PAX4-201ENST00000338516 SNAPC4Q5SXM2 1469 aa26.04■■□□□ 1.76
PAX4-201ENST00000338516 GRIN2BQ13224 1484 aa26.01■■□□□ 1.75
PAX4-201ENST00000338516 ABCA5Q8WWZ7 1642 aa25.98■■□□□ 1.75
PAX4-201ENST00000338516 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
PAX4-201ENST00000338516 MAGI1Q96QZ7 1491 aaPredicted RBP25.97■■□□□ 1.75
PAX4-201ENST00000338516 FBLN2P98095 1184 aa25.95■■□□□ 1.74
PAX4-201ENST00000338516 PBRM1Q86U86 1689 aa25.93■■□□□ 1.74
PAX4-201ENST00000338516 TRIM41Q8WV44 630 aa25.92■■□□□ 1.74
PAX4-201ENST00000338516 RIMBP3CA6NJZ7 1639 aa25.91■■□□□ 1.74
PAX4-201ENST00000338516 RIMBP3BA6NNM3 1639 aa25.91■■□□□ 1.74
PAX4-201ENST00000338516 RIMBP3Q9UFD9 1639 aa25.91■■□□□ 1.74
PAX4-201ENST00000338516 ARHGEF11O15085 1522 aa25.88■■□□□ 1.73
PAX4-201ENST00000338516 SYNJ2O15056 1496 aa25.87■■□□□ 1.73
PAX4-201ENST00000338516 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
PAX4-201ENST00000338516 CLASP1Q7Z460 1538 aa25.81■■□□□ 1.72
PAX4-201ENST00000338516 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
PAX4-201ENST00000338516 ERICH3Q5RHP9 1530 aa25.7■■□□□ 1.7
PAX4-201ENST00000338516 GRIN2AQ12879 1464 aa25.69■■□□□ 1.7
PAX4-201ENST00000338516 ARAP1Q96P48 1450 aa25.68■■□□□ 1.7
PAX4-201ENST00000338516 FHAD1B1AJZ9 1412 aa25.66■■□□□ 1.7
PAX4-201ENST00000338516 CYB5RLQ6IPT4 315 aa25.61■■□□□ 1.69
PAX4-201ENST00000338516 NUP160Q12769 1436 aa25.61■■□□□ 1.69
PAX4-201ENST00000338516 CEP170Q5SW79 1584 aa25.6■■□□□ 1.69
PAX4-201ENST00000338516 KIF27Q86VH2 1401 aa25.52■■□□□ 1.68
PAX4-201ENST00000338516 IGF1RP08069 1367 aa25.49■■□□□ 1.67
PAX4-201ENST00000338516 ERCC6L2Q5T890 1561 aa25.46■■□□□ 1.67
PAX4-201ENST00000338516 SHROOM2Q13796 1616 aa25.44■■□□□ 1.66
PAX4-201ENST00000338516 CUL7Q14999 1698 aa25.4■■□□□ 1.66
PAX4-201ENST00000338516 RUSC2Q8N2Y8 1516 aa25.38■■□□□ 1.65
PAX4-201ENST00000338516 CARMIL1Q5VZK9 1371 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms