RNA–Protein interactions for RNA: ENST00000378371.6

ARHGEF16-201, Transcript of Rho guanine nucleotide exchange factor 16, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF16, Length 2,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16-201ENST00000378371 NISCHQ9Y2I1 1504 aa31.32■■■□□ 2.6
ARHGEF16-201ENST00000378371 CCDC180Q9P1Z9 1646 aa27.16■■□□□ 1.94
ARHGEF16-201ENST00000378371 ZCCHC6Q5VYS8 1495 aaKnown RBP26.44■■□□□ 1.82
ARHGEF16-201ENST00000378371 SHROOM4Q9ULL8 1493 aa26.24■■□□□ 1.79
ARHGEF16-201ENST00000378371 DCAF1Q9Y4B6 1507 aa25.94■■□□□ 1.74
ARHGEF16-201ENST00000378371 SUPT5HO00267 1087 aaKnown RBP25.92■■□□□ 1.74
ARHGEF16-201ENST00000378371 MYO15BQ96JP2 1530 aa25.68■■□□□ 1.7
ARHGEF16-201ENST00000378371 HRCP23327 699 aa25.63■■□□□ 1.69
ARHGEF16-201ENST00000378371 DCAF8L2P0C7V8 631 aa25.56■■□□□ 1.68
ARHGEF16-201ENST00000378371 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
ARHGEF16-201ENST00000378371 ABCC9O60706 1549 aa25.18■■□□□ 1.62
ARHGEF16-201ENST00000378371 PCGF6Q9BYE7 350 aa25.17■■□□□ 1.62
ARHGEF16-201ENST00000378371 NACADO15069 1562 aa25.15■■□□□ 1.62
ARHGEF16-201ENST00000378371 SCRIBQ14160 1630 aa24.98■■□□□ 1.59
ARHGEF16-201ENST00000378371 PPARGC1BQ86YN6 1023 aaKnown RBP24.93■■□□□ 1.58
ARHGEF16-201ENST00000378371 RB1CC1Q8TDY2 1594 aa24.82■■□□□ 1.56
ARHGEF16-201ENST00000378371 LOC105371045A0A1W2PR82 267 aa24.73■■□□□ 1.55
ARHGEF16-201ENST00000378371 TRIM26Q12899 539 aaPredicted RBP24.65■■□□□ 1.54
ARHGEF16-201ENST00000378371 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.5
ARHGEF16-201ENST00000378371 UNC13AQ9UPW8 1703 aa24.4■■□□□ 1.5
ARHGEF16-201ENST00000378371 ZEB1P37275 1124 aaPredicted RBP24.35■■□□□ 1.49
ARHGEF16-201ENST00000378371 CECR2Q9BXF3 1484 aa24.28■■□□□ 1.48
ARHGEF16-201ENST00000378371 MROH2BQ7Z745 1585 aa24.21■■□□□ 1.47
ARHGEF16-201ENST00000378371 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
ARHGEF16-201ENST00000378371 TRIM41Q8WV44 630 aa24.14■■□□□ 1.45
ARHGEF16-201ENST00000378371 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.45
ARHGEF16-201ENST00000378371 WIZO95785 1651 aa24.05■■□□□ 1.44
ARHGEF16-201ENST00000378371 PELP1Q8IZL8 1130 aaKnown RBP24.05■■□□□ 1.44
ARHGEF16-201ENST00000378371 SMARCA4P51532 1647 aa24■■□□□ 1.43
ARHGEF16-201ENST00000378371 SCAF1Q9H7N4 1312 aaKnown RBP23.9■■□□□ 1.42
ARHGEF16-201ENST00000378371 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
ARHGEF16-201ENST00000378371 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.4
ARHGEF16-201ENST00000378371 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.48e-8■■■□□ 14.7
ARHGEF16-201ENST00000378371 EIF4G1Q04637 1599 aaKnown RBP23.72■■□□□ 1.39
ARHGEF16-201ENST00000378371 PEG3Q9GZU2 1588 aa23.72■■□□□ 1.39
ARHGEF16-201ENST00000378371 EHMT2Q96KQ7 1210 aa23.63■■□□□ 1.37
ARHGEF16-201ENST00000378371 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
ARHGEF16-201ENST00000378371 CCDC88BA6NC98 1476 aa23.55■■□□□ 1.36
ARHGEF16-201ENST00000378371 ACIN1Q9UKV3 1341 aaKnown RBP23.51■■□□□ 1.35
ARHGEF16-201ENST00000378371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.51■■□□□ 1.35
ARHGEF16-201ENST00000378371 WRNQ14191 1432 aaPredicted RBP eCLIP23.48■■□□□ 1.35
ARHGEF16-201ENST00000378371 CCER1Q8TC90 406 aaPredicted RBP23.47■■□□□ 1.35
ARHGEF16-201ENST00000378371 ATAD2BQ9ULI0 1458 aa23.47■■□□□ 1.35
ARHGEF16-201ENST00000378371 NEUROD1Q13562 356 aa23.41■■□□□ 1.34
ARHGEF16-201ENST00000378371 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
ARHGEF16-201ENST00000378371 DIEXFQ68CQ4 756 aaKnown RBP23.32■■□□□ 1.32
ARHGEF16-201ENST00000378371 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
ARHGEF16-201ENST00000378371 CEP162Q5TB80 1403 aa23.3■■□□□ 1.32
ARHGEF16-201ENST00000378371 CENPBP07199 599 aaPredicted RBP23.27■■□□□ 1.31
ARHGEF16-201ENST00000378371 TNIKQ9UKE5 1360 aa23.24■■□□□ 1.31
ARHGEF16-201ENST00000378371 HMGXB3Q12766 1538 aa23.24■■□□□ 1.31
ARHGEF16-201ENST00000378371 GTF3C3Q9Y5Q9 886 aa23.2■■□□□ 1.3
ARHGEF16-201ENST00000378371 NCAPD3P42695 1498 aa23.19■■□□□ 1.3
ARHGEF16-201ENST00000378371 EEA1Q15075 1411 aa23.18■■□□□ 1.3
ARHGEF16-201ENST00000378371 SOGA1O94964 1423 aa23.15■■□□□ 1.3
ARHGEF16-201ENST00000378371 ZNF316A6NFI3 1004 aaPredicted RBP23.05■■□□□ 1.28
ARHGEF16-201ENST00000378371 GOLGA3Q08378 1498 aa23.04■■□□□ 1.28
ARHGEF16-201ENST00000378371 TTBK1Q5TCY1 1321 aaPredicted RBP23.04■■□□□ 1.28
ARHGEF16-201ENST00000378371 RUSC2Q8N2Y8 1516 aa23.02■■□□□ 1.28
ARHGEF16-201ENST00000378371 CSRNP3Q8WYN3 585 aa23■■□□□ 1.27
ARHGEF16-201ENST00000378371 MYT1Q01538 1121 aa23■■□□□ 1.27
ARHGEF16-201ENST00000378371 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
ARHGEF16-201ENST00000378371 KIF21BO75037 1637 aa22.91■■□□□ 1.26
ARHGEF16-201ENST00000378371 UBTFP17480 764 aaKnown RBP22.89■■□□□ 1.25
ARHGEF16-201ENST00000378371 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
ARHGEF16-201ENST00000378371 CC2D2AQ9P2K1 1620 aa22.84■■□□□ 1.25
ARHGEF16-201ENST00000378371 TOP2BQ02880 1626 aa22.81■■□□□ 1.24
ARHGEF16-201ENST00000378371 PRDM2Q13029 1718 aa22.81■■□□□ 1.24
ARHGEF16-201ENST00000378371 CFTRP13569 1480 aa22.81■■□□□ 1.24
ARHGEF16-201ENST00000378371 BIVM-ERCC5R4GMW8 1640 aa22.8■■□□□ 1.24
ARHGEF16-201ENST00000378371 MIER1Q8N108 512 aa22.76■■□□□ 1.23
ARHGEF16-201ENST00000378371 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
ARHGEF16-201ENST00000378371 CLIP1P30622 1438 aa22.74■■□□□ 1.23
ARHGEF16-201ENST00000378371 YTHDC1Q96MU7 727 aaKnown RBP22.73■■□□□ 1.23
ARHGEF16-201ENST00000378371 HNRNPUL2Q1KMD3 747 aaKnown RBP22.68■■□□□ 1.22
ARHGEF16-201ENST00000378371 CUX1P39880 1505 aa22.61■■□□□ 1.21
ARHGEF16-201ENST00000378371 CADPSQ9ULU8 1353 aa22.6■■□□□ 1.21
ARHGEF16-201ENST00000378371 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
ARHGEF16-201ENST00000378371 CLSPNQ9HAW4 1339 aa22.54■■□□□ 1.2
ARHGEF16-201ENST00000378371 APLP2Q06481 763 aa22.49■■□□□ 1.19
ARHGEF16-201ENST00000378371 DHX57Q6P158 1386 aaKnown RBP22.46■■□□□ 1.19
ARHGEF16-201ENST00000378371 ERICH3Q5RHP9 1530 aa22.44■■□□□ 1.18
ARHGEF16-201ENST00000378371 ARAP1Q96P48 1450 aa22.39■■□□□ 1.18
ARHGEF16-201ENST00000378371 KIF27Q86VH2 1401 aa22.37■■□□□ 1.17
ARHGEF16-201ENST00000378371 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
ARHGEF16-201ENST00000378371 PRXQ9BXM0 1461 aa22.36■■□□□ 1.17
ARHGEF16-201ENST00000378371 LAMC3Q9Y6N6 1575 aa22.35■■□□□ 1.17
ARHGEF16-201ENST00000378371 CUX2O14529 1486 aa22.33■■□□□ 1.17
ARHGEF16-201ENST00000378371 RRBP1Q9P2E9 1410 aaKnown RBP22.32■■□□□ 1.16
ARHGEF16-201ENST00000378371 DNAJC5BQ9UF47 199 aa22.3■■□□□ 1.16
ARHGEF16-201ENST00000378371 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
ARHGEF16-201ENST00000378371 SUPT16HQ9Y5B9 1047 aaKnown RBP22.29■■□□□ 1.16
ARHGEF16-201ENST00000378371 FGD5Q6ZNL6 1462 aa22.29■■□□□ 1.16
ARHGEF16-201ENST00000378371 NESP48681 1621 aa22.26■■□□□ 1.15
ARHGEF16-201ENST00000378371 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
ARHGEF16-201ENST00000378371 KANK4Q5T7N3 995 aaPredicted RBP22.21■■□□□ 1.15
ARHGEF16-201ENST00000378371 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
ARHGEF16-201ENST00000378371 CCNB3Q8WWL7 1395 aa22.13■■□□□ 1.13
ARHGEF16-201ENST00000378371 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
ARHGEF16-201ENST00000378371 ABCA10Q8WWZ4 1543 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms