Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE1AP54750 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE1AP54750 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE1AP54750 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PDE1AP54750 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 AC063926.2-201ENST00000623766 1308 ntBASIC17.98■□□□□ 0.47
PDE1AP54750 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PDE1AP54750 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE1AP54750 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PDE1AP54750 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE1AP54750 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PDE1AP54750 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE1AP54750 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.98■□□□□ 0.47
PDE1AP54750 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE1AP54750 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE1AP54750 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE1AP54750 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.98■□□□□ 0.47
PDE1AP54750 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.98■□□□□ 0.47
PDE1AP54750 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE1AP54750 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.98■□□□□ 0.47
PDE1AP54750 HOMER2P2-201ENST00000451621 847 ntBASIC17.98■□□□□ 0.47
PDE1AP54750 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.98■□□□□ 0.47
PDE1AP54750 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.98■□□□□ 0.47
PDE1AP54750 AC079316.1-201ENST00000548397 411 ntBASIC17.98■□□□□ 0.47
PDE1AP54750 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.98■□□□□ 0.47
PDE1AP54750 MIR4783-201ENST00000580343 82 ntBASIC17.98■□□□□ 0.47
PDE1AP54750 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.98■□□□□ 0.47
PDE1AP54750 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE1AP54750 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.98■□□□□ 0.47
PDE1AP54750 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.98■□□□□ 0.47
PDE1AP54750 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE1AP54750 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE1AP54750 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
PDE1AP54750 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PDE1AP54750 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE1AP54750 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE1AP54750 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 AC009093.10-201ENST00000641956 1442 ntBASIC17.98■□□□□ 0.47
PDE1AP54750 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE1AP54750 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.97■□□□□ 0.47
PDE1AP54750 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE1AP54750 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.97■□□□□ 0.47
PDE1AP54750 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE1AP54750 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.97■□□□□ 0.47
PDE1AP54750 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE1AP54750 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE1AP54750 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PDE1AP54750 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
PDE1AP54750 MIR326-201ENST00000362220 95 ntBASIC17.97■□□□□ 0.47
PDE1AP54750 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.97■□□□□ 0.47
PDE1AP54750 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE1AP54750 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.97■□□□□ 0.47
PDE1AP54750 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.97■□□□□ 0.47
PDE1AP54750 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PDE1AP54750 AC104989.1-201ENST00000519711 778 ntBASIC17.97■□□□□ 0.47
PDE1AP54750 AC027237.1-201ENST00000560942 655 ntBASIC17.97■□□□□ 0.47
PDE1AP54750 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.97■□□□□ 0.47
PDE1AP54750 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE1AP54750 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDE1AP54750 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE1AP54750 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.96■□□□□ 0.47
PDE1AP54750 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PDE1AP54750 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDE1AP54750 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDE1AP54750 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDE1AP54750 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PDE1AP54750 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDE1AP54750 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PDE1AP54750 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms