Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1FO60840 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1FO60840 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.18■□□□□ 0.5
CACNA1FO60840 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1FO60840 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.18■□□□□ 0.5
CACNA1FO60840 RN7SL720P-201ENST00000488178 304 ntBASIC18.18■□□□□ 0.5
CACNA1FO60840 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC18.18■□□□□ 0.5
CACNA1FO60840 RTN3P1-201ENST00000536295 711 ntBASIC18.18■□□□□ 0.5
CACNA1FO60840 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.18■□□□□ 0.5
CACNA1FO60840 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC18.18■□□□□ 0.5
CACNA1FO60840 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1FO60840 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1FO60840 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1FO60840 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1FO60840 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1FO60840 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CACNA1FO60840 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CACNA1FO60840 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1FO60840 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1FO60840 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC18.18■□□□□ 0.5
CACNA1FO60840 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CACNA1FO60840 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 KLF17P1-201ENST00000547105 1126 ntBASIC18.17■□□□□ 0.5
CACNA1FO60840 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.17■□□□□ 0.5
CACNA1FO60840 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
CACNA1FO60840 AL133467.4-201ENST00000602953 725 ntBASIC18.17■□□□□ 0.5
CACNA1FO60840 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.17■□□□□ 0.5
CACNA1FO60840 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.17■□□□□ 0.5
CACNA1FO60840 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.17■□□□□ 0.5
CACNA1FO60840 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC18.17■□□□□ 0.5
CACNA1FO60840 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.17■□□□□ 0.5
CACNA1FO60840 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.17■□□□□ 0.5
CACNA1FO60840 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 OR2K2-202ENST00000374428 1038 ntBASIC18.17■□□□□ 0.5
CACNA1FO60840 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CACNA1FO60840 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.17■□□□□ 0.5
CACNA1FO60840 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CACNA1FO60840 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.17■□□□□ 0.5
CACNA1FO60840 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.17■□□□□ 0.5
CACNA1FO60840 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.17■□□□□ 0.5
CACNA1FO60840 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CACNA1FO60840 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CACNA1FO60840 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1FO60840 KRT8P43-201ENST00000406052 1458 ntBASIC18.16■□□□□ 0.5
CACNA1FO60840 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1FO60840 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1FO60840 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CACNA1FO60840 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1FO60840 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1FO60840 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CACNA1FO60840 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC18.16■□□□□ 0.5
CACNA1FO60840 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.16■□□□□ 0.5
CACNA1FO60840 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1FO60840 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1FO60840 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1FO60840 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.16■□□□□ 0.5
CACNA1FO60840 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.16■□□□□ 0.5
CACNA1FO60840 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC18.16■□□□□ 0.5
CACNA1FO60840 FTLP1-201ENST00000449155 526 ntBASIC18.16■□□□□ 0.5
CACNA1FO60840 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.16■□□□□ 0.5
CACNA1FO60840 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.16■□□□□ 0.5
CACNA1FO60840 AC242376.1-201ENST00000559033 726 ntBASIC18.16■□□□□ 0.5
CACNA1FO60840 AC020922.3-201ENST00000595064 547 ntBASIC18.16■□□□□ 0.5
CACNA1FO60840 AC051619.9-201ENST00000623237 597 ntBASIC18.16■□□□□ 0.5
CACNA1FO60840 AC006453.1-201ENST00000636037 1257 ntBASIC18.16■□□□□ 0.5
CACNA1FO60840 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CACNA1FO60840 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1FO60840 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.16■□□□□ 0.5
CACNA1FO60840 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1FO60840 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1FO60840 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1FO60840 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.16■□□□□ 0.5
CACNA1FO60840 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1FO60840 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA1FO60840 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms