Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CASQ2O14958 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CASQ2O14958 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CASQ2O14958 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CASQ2O14958 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.09□□□□□ -0.15
CASQ2O14958 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.09□□□□□ -0.15
CASQ2O14958 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CASQ2O14958 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CASQ2O14958 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CASQ2O14958 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CASQ2O14958 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CASQ2O14958 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CASQ2O14958 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CASQ2O14958 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CASQ2O14958 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CASQ2O14958 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CASQ2O14958 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CASQ2O14958 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CASQ2O14958 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 MYADML-201ENST00000474610 2147 ntBASIC14.08□□□□□ -0.16
CASQ2O14958 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.08□□□□□ -0.16
CASQ2O14958 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CASQ2O14958 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.08□□□□□ -0.16
CASQ2O14958 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CASQ2O14958 HLA-H-201ENST00000383620 1096 ntBASIC14.08□□□□□ -0.16
CASQ2O14958 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.08□□□□□ -0.16
CASQ2O14958 FO393414.2-201ENST00000405153 598 ntBASIC14.08□□□□□ -0.16
CASQ2O14958 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.08□□□□□ -0.16
CASQ2O14958 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.08□□□□□ -0.16
CASQ2O14958 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.08□□□□□ -0.16
CASQ2O14958 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.08□□□□□ -0.16
CASQ2O14958 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.08□□□□□ -0.16
CASQ2O14958 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.08□□□□□ -0.16
CASQ2O14958 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.08□□□□□ -0.16
CASQ2O14958 AL121772.3-201ENST00000610840 674 ntBASIC14.08□□□□□ -0.16
CASQ2O14958 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC14.08□□□□□ -0.16
CASQ2O14958 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.08□□□□□ -0.16
CASQ2O14958 PCDHB18P-202ENST00000526308 3197 ntBASIC14.08□□□□□ -0.16
CASQ2O14958 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.08□□□□□ -0.16
CASQ2O14958 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
CASQ2O14958 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC14.08□□□□□ -0.16
CASQ2O14958 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.08□□□□□ -0.16
CASQ2O14958 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.08□□□□□ -0.16
CASQ2O14958 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CASQ2O14958 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.08□□□□□ -0.16
CASQ2O14958 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
CASQ2O14958 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CASQ2O14958 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.07□□□□□ -0.16
CASQ2O14958 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 AP000437.1-201ENST00000624057 2085 ntBASIC14.07□□□□□ -0.16
CASQ2O14958 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.07□□□□□ -0.16
CASQ2O14958 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CASQ2O14958 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.07□□□□□ -0.16
CASQ2O14958 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.07□□□□□ -0.16
CASQ2O14958 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.07□□□□□ -0.16
CASQ2O14958 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CASQ2O14958 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.07□□□□□ -0.16
CASQ2O14958 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.07□□□□□ -0.16
CASQ2O14958 MIR6074-201ENST00000612054 107 ntBASIC14.07□□□□□ -0.16
CASQ2O14958 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 TP73-AS1-207ENST00000624167 988 ntBASIC14.07□□□□□ -0.16
CASQ2O14958 AC008267.7-201ENST00000624570 1194 ntBASIC14.07□□□□□ -0.16
CASQ2O14958 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.07□□□□□ -0.16
CASQ2O14958 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.07□□□□□ -0.16
CASQ2O14958 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CASQ2O14958 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms