RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 NISCHQ9Y2I1 1504 aa26.82■■□□□ 1.88
PCDHB18P-202ENST00000526308 SHROOM4Q9ULL8 1493 aa23.71■■□□□ 1.39
PCDHB18P-202ENST00000526308 SUPT5HO00267 1087 aaKnown RBP23.5■■□□□ 1.35
PCDHB18P-202ENST00000526308 HRCP23327 699 aa22.85■■□□□ 1.25
PCDHB18P-202ENST00000526308 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
PCDHB18P-202ENST00000526308 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
PCDHB18P-202ENST00000526308 PCGF6Q9BYE7 350 aa22.76■■□□□ 1.23
PCDHB18P-202ENST00000526308 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
PCDHB18P-202ENST00000526308 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
PCDHB18P-202ENST00000526308 PPARGC1BQ86YN6 1023 aaKnown RBP22.49■■□□□ 1.19
PCDHB18P-202ENST00000526308 CCDC180Q9P1Z9 1646 aa22.38■■□□□ 1.17
PCDHB18P-202ENST00000526308 LOC105371045A0A1W2PR82 267 aa22.31■■□□□ 1.16
PCDHB18P-202ENST00000526308 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
PCDHB18P-202ENST00000526308 TRIM26Q12899 539 aaPredicted RBP22.04■■□□□ 1.12
PCDHB18P-202ENST00000526308 FAM9AQ8IZU1 332 aaPredicted RBP21.79■■□□□ 1.08
PCDHB18P-202ENST00000526308 EHMT2Q96KQ7 1210 aa21.77■■□□□ 1.08
PCDHB18P-202ENST00000526308 TRIM41Q8WV44 630 aa21.75■■□□□ 1.07
PCDHB18P-202ENST00000526308 ZEB1P37275 1124 aaPredicted RBP21.73■■□□□ 1.07
PCDHB18P-202ENST00000526308 ABCC9O60706 1549 aa21.5■■□□□ 1.03
PCDHB18P-202ENST00000526308 RSF1Q96T23 1441 aaPredicted RBP21.48■■□□□ 1.03
PCDHB18P-202ENST00000526308 PELP1Q8IZL8 1130 aaKnown RBP21.42■■□□□ 1.02
PCDHB18P-202ENST00000526308 SCRIBQ14160 1630 aa21.42■■□□□ 1.02
PCDHB18P-202ENST00000526308 SCAF1Q9H7N4 1312 aaKnown RBP21.38■■□□□ 1.01
PCDHB18P-202ENST00000526308 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
PCDHB18P-202ENST00000526308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.24■□□□□ 0.99
PCDHB18P-202ENST00000526308 CCER1Q8TC90 406 aaPredicted RBP21.24■□□□□ 0.99
PCDHB18P-202ENST00000526308 TTBK1Q5TCY1 1321 aaPredicted RBP21.15■□□□□ 0.98
PCDHB18P-202ENST00000526308 CECR2Q9BXF3 1484 aa21.04■□□□□ 0.96
PCDHB18P-202ENST00000526308 ACIN1Q9UKV3 1341 aaKnown RBP21.03■□□□□ 0.96
PCDHB18P-202ENST00000526308 NEUROD1Q13562 356 aa21■□□□□ 0.95
PCDHB18P-202ENST00000526308 DIEXFQ68CQ4 756 aaKnown RBP20.98■□□□□ 0.95
PCDHB18P-202ENST00000526308 CENPBP07199 599 aaPredicted RBP20.95■□□□□ 0.94
PCDHB18P-202ENST00000526308 MROH2BQ7Z745 1585 aa20.95■□□□□ 0.94
PCDHB18P-202ENST00000526308 GTF3C3Q9Y5Q9 886 aa20.9■□□□□ 0.94
PCDHB18P-202ENST00000526308 WIZO95785 1651 aa20.85■□□□□ 0.93
PCDHB18P-202ENST00000526308 UBTFP17480 764 aaKnown RBP20.75■□□□□ 0.91
PCDHB18P-202ENST00000526308 YTHDC1Q96MU7 727 aaKnown RBP20.73■□□□□ 0.91
PCDHB18P-202ENST00000526308 NACADO15069 1562 aa20.72■□□□□ 0.91
PCDHB18P-202ENST00000526308 CEP162Q5TB80 1403 aa20.68■□□□□ 0.9
PCDHB18P-202ENST00000526308 PABPN1Q86U42 306 aaKnown RBP eCLIP20.67■□□□□ 0.9
PCDHB18P-202ENST00000526308 ABCC8Q09428 1581 aa20.65■□□□□ 0.9
PCDHB18P-202ENST00000526308 CCDC88BA6NC98 1476 aa20.64■□□□□ 0.9
PCDHB18P-202ENST00000526308 ZNF316A6NFI3 1004 aaPredicted RBP20.64■□□□□ 0.89
PCDHB18P-202ENST00000526308 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
PCDHB18P-202ENST00000526308 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.89
PCDHB18P-202ENST00000526308 SOGA1O94964 1423 aa20.58■□□□□ 0.89
PCDHB18P-202ENST00000526308 HNRNPUL2Q1KMD3 747 aaKnown RBP20.57■□□□□ 0.88
PCDHB18P-202ENST00000526308 CSRNP3Q8WYN3 585 aa20.57■□□□□ 0.88
PCDHB18P-202ENST00000526308 TNIKQ9UKE5 1360 aa20.54■□□□□ 0.88
PCDHB18P-202ENST00000526308 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
PCDHB18P-202ENST00000526308 MYT1Q01538 1121 aa20.45■□□□□ 0.86
PCDHB18P-202ENST00000526308 MIER1Q8N108 512 aa20.45■□□□□ 0.86
PCDHB18P-202ENST00000526308 RANGAP1P46060 587 aaPredicted RBP20.44■□□□□ 0.86
PCDHB18P-202ENST00000526308 TOP2AP11388 1531 aaKnown RBP20.44■□□□□ 0.86
PCDHB18P-202ENST00000526308 RUSC2Q8N2Y8 1516 aa20.43■□□□□ 0.86
PCDHB18P-202ENST00000526308 APLP2Q06481 763 aa20.41■□□□□ 0.86
PCDHB18P-202ENST00000526308 EEA1Q15075 1411 aa20.38■□□□□ 0.85
PCDHB18P-202ENST00000526308 GOLGA3Q08378 1498 aa20.36■□□□□ 0.85
PCDHB18P-202ENST00000526308 SMARCA2P51531 1590 aa20.36■□□□□ 0.85
PCDHB18P-202ENST00000526308 SMARCA4P51532 1647 aa20.32■□□□□ 0.84
PCDHB18P-202ENST00000526308 CLIP1P30622 1438 aa20.24■□□□□ 0.83
PCDHB18P-202ENST00000526308 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
PCDHB18P-202ENST00000526308 VPS8Q8N3P4 1428 aa20.11■□□□□ 0.81
PCDHB18P-202ENST00000526308 RAPGEF2Q9Y4G8 1499 aa20.02■□□□□ 0.8
PCDHB18P-202ENST00000526308 SYNJ1O43426 1573 aa20.02■□□□□ 0.79
PCDHB18P-202ENST00000526308 KIF21BO75037 1637 aa20■□□□□ 0.79
PCDHB18P-202ENST00000526308 ITGAEP38570 1179 aa19.96■□□□□ 0.79
PCDHB18P-202ENST00000526308 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
PCDHB18P-202ENST00000526308 SUPT16HQ9Y5B9 1047 aaKnown RBP19.93■□□□□ 0.78
PCDHB18P-202ENST00000526308 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
PCDHB18P-202ENST00000526308 DHX57Q6P158 1386 aaKnown RBP19.91■□□□□ 0.78
PCDHB18P-202ENST00000526308 CLSPNQ9HAW4 1339 aa19.9■□□□□ 0.78
PCDHB18P-202ENST00000526308 KANK4Q5T7N3 995 aaPredicted RBP19.89■□□□□ 0.77
PCDHB18P-202ENST00000526308 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.75
PCDHB18P-202ENST00000526308 BCANQ96GW7 911 aa19.76■□□□□ 0.75
PCDHB18P-202ENST00000526308 PEG3Q9GZU2 1588 aa19.73■□□□□ 0.75
PCDHB18P-202ENST00000526308 BICRAQ9NZM4 1560 aa19.73■□□□□ 0.75
PCDHB18P-202ENST00000526308 KCNH8Q96L42 1107 aa19.73■□□□□ 0.75
PCDHB18P-202ENST00000526308 ARAP1Q96P48 1450 aa19.71■□□□□ 0.75
PCDHB18P-202ENST00000526308 TSHZ2Q9NRE2 1034 aa19.71■□□□□ 0.75
PCDHB18P-202ENST00000526308 CCNB3Q8WWL7 1395 aa19.69■□□□□ 0.74
PCDHB18P-202ENST00000526308 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
PCDHB18P-202ENST00000526308 DDX10Q13206 875 aaKnown RBP19.65■□□□□ 0.74
PCDHB18P-202ENST00000526308 PRXQ9BXM0 1461 aa19.63■□□□□ 0.73
PCDHB18P-202ENST00000526308 RRBP1Q9P2E9 1410 aaKnown RBP19.63■□□□□ 0.73
PCDHB18P-202ENST00000526308 FKBP8Q14318 412 aa19.62■□□□□ 0.73
PCDHB18P-202ENST00000526308 ERICH3Q5RHP9 1530 aa19.61■□□□□ 0.73
PCDHB18P-202ENST00000526308 ATP1B4Q9UN42 357 aaPredicted RBP19.6■□□□□ 0.73
PCDHB18P-202ENST00000526308 FAM50AQ14320 339 aaKnown RBP19.6■□□□□ 0.73
PCDHB18P-202ENST00000526308 RAB3GAP2Q9H2M9 1393 aa19.59■□□□□ 0.73
PCDHB18P-202ENST00000526308 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
PCDHB18P-202ENST00000526308 NEFLP07196 543 aa19.57■□□□□ 0.72
PCDHB18P-202ENST00000526308 ANP32EQ9BTT0 268 aa19.56■□□□□ 0.72
PCDHB18P-202ENST00000526308 SIN3AQ96ST3 1273 aa19.55■□□□□ 0.72
PCDHB18P-202ENST00000526308 HIRIP3Q9BW71 556 aaPredicted RBP19.55■□□□□ 0.72
PCDHB18P-202ENST00000526308 ARHGAP35Q9NRY4 1499 aa19.5■□□□□ 0.71
PCDHB18P-202ENST00000526308 TRIM52Q96A61 297 aa19.5■□□□□ 0.71
PCDHB18P-202ENST00000526308 BIVM-ERCC5R4GMW8 1640 aa19.49■□□□□ 0.71
PCDHB18P-202ENST00000526308 CUX2O14529 1486 aa19.48■□□□□ 0.71
PCDHB18P-202ENST00000526308 P3H3Q8IVL6 736 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms