RNA–Protein interactions for RNA: ENST00000536300.1

SP6-202, Transcript of Sp6 transcription factor, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SP6, Length 3,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP6-202ENST00000536300 NISCHQ9Y2I1 1504 aa28.36■■■□□ 2.13
SP6-202ENST00000536300 DCAF8L2P0C7V8 631 aa25.38■■□□□ 1.65
SP6-202ENST00000536300 SHROOM4Q9ULL8 1493 aa25.3■■□□□ 1.64
SP6-202ENST00000536300 SUPT5HO00267 1087 aaKnown RBP24.91■■□□□ 1.58
SP6-202ENST00000536300 ZCCHC6Q5VYS8 1495 aaKnown RBP23.84■■□□□ 1.41
SP6-202ENST00000536300 CCDC180Q9P1Z9 1646 aa23.63■■□□□ 1.37
SP6-202ENST00000536300 CHIC1Q5VXU3 224 aa23.61■■□□□ 1.37
SP6-202ENST00000536300 EHMT2Q96KQ7 1210 aa23.39■■□□□ 1.33
SP6-202ENST00000536300 PCGF6Q9BYE7 350 aa23.33■■□□□ 1.33
SP6-202ENST00000536300 LOC105371045A0A1W2PR82 267 aa23.29■■□□□ 1.32
SP6-202ENST00000536300 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
SP6-202ENST00000536300 FAM9AQ8IZU1 332 aaPredicted RBP23.21■■□□□ 1.31
SP6-202ENST00000536300 ABCC9O60706 1549 aa23.04■■□□□ 1.28
SP6-202ENST00000536300 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
SP6-202ENST00000536300 SCRIBQ14160 1630 aa22.92■■□□□ 1.26
SP6-202ENST00000536300 HRCP23327 699 aa22.84■■□□□ 1.25
SP6-202ENST00000536300 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
SP6-202ENST00000536300 PPARGC1BQ86YN6 1023 aaKnown RBP22.79■■□□□ 1.24
SP6-202ENST00000536300 RSF1Q96T23 1441 aaPredicted RBP22.62■■□□□ 1.21
SP6-202ENST00000536300 TTBK1Q5TCY1 1321 aaPredicted RBP22.55■■□□□ 1.2
SP6-202ENST00000536300 PABPN1Q86U42 306 aaKnown RBP eCLIP22.54■■□□□ 1.2
SP6-202ENST00000536300 TRIM26Q12899 539 aaPredicted RBP22.49■■□□□ 1.19
SP6-202ENST00000536300 CECR2Q9BXF3 1484 aa22.43■■□□□ 1.18
SP6-202ENST00000536300 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.17
SP6-202ENST00000536300 MROH2BQ7Z745 1585 aa22.2■■□□□ 1.14
SP6-202ENST00000536300 NACADO15069 1562 aa22.17■■□□□ 1.14
SP6-202ENST00000536300 RANGAP1P46060 587 aaPredicted RBP22.13■■□□□ 1.13
SP6-202ENST00000536300 UBTFP17480 764 aaKnown RBP22.09■■□□□ 1.13
SP6-202ENST00000536300 WIZO95785 1651 aa22.03■■□□□ 1.12
SP6-202ENST00000536300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.98■■□□□ 1.11
SP6-202ENST00000536300 CCER1Q8TC90 406 aaPredicted RBP21.98■■□□□ 1.11
SP6-202ENST00000536300 ZEB1P37275 1124 aaPredicted RBP21.93■■□□□ 1.1
SP6-202ENST00000536300 BAZ1AQ9NRL2 1556 aaPredicted RBP21.79■■□□□ 1.08
SP6-202ENST00000536300 ABCC8Q09428 1581 aa21.77■■□□□ 1.08
SP6-202ENST00000536300 CSRNP3Q8WYN3 585 aa21.71■■□□□ 1.07
SP6-202ENST00000536300 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
SP6-202ENST00000536300 SOGA1O94964 1423 aa21.66■■□□□ 1.06
SP6-202ENST00000536300 APLP2Q06481 763 aa21.65■■□□□ 1.06
SP6-202ENST00000536300 HNRNPUL2Q1KMD3 747 aaKnown RBP21.63■■□□□ 1.05
SP6-202ENST00000536300 SMARCA4P51532 1647 aa21.53■■□□□ 1.04
SP6-202ENST00000536300 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
SP6-202ENST00000536300 RUSC2Q8N2Y8 1516 aa21.51■■□□□ 1.03
SP6-202ENST00000536300 CEP162Q5TB80 1403 aa21.5■■□□□ 1.03
SP6-202ENST00000536300 SMARCA2P51531 1590 aa21.42■■□□□ 1.02
SP6-202ENST00000536300 WRNQ14191 1432 aaPredicted RBP eCLIP21.42■■□□□ 1.02
SP6-202ENST00000536300 TNIKQ9UKE5 1360 aa21.32■■□□□ 1
SP6-202ENST00000536300 DIEXFQ68CQ4 756 aaKnown RBP21.31■■□□□ 1
SP6-202ENST00000536300 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
SP6-202ENST00000536300 YTHDC1Q96MU7 727 aaKnown RBP21.31■■□□□ 1
SP6-202ENST00000536300 ITGAEP38570 1179 aa21.29■■□□□ 1
SP6-202ENST00000536300 ATP1B4Q9UN42 357 aaPredicted RBP21.27■■□□□ 1
SP6-202ENST00000536300 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
SP6-202ENST00000536300 GOLGA3Q08378 1498 aa21.24■□□□□ 0.99
SP6-202ENST00000536300 CLIP1P30622 1438 aa21.2■□□□□ 0.98
SP6-202ENST00000536300 ATAD2BQ9ULI0 1458 aa21.19■□□□□ 0.98
SP6-202ENST00000536300 EEA1Q15075 1411 aa21.18■□□□□ 0.98
SP6-202ENST00000536300 BICRAQ9NZM4 1560 aa21.18■□□□□ 0.98
SP6-202ENST00000536300 EIF4G1Q04637 1599 aaKnown RBP21.15■□□□□ 0.98
SP6-202ENST00000536300 SCAF1Q9H7N4 1312 aaKnown RBP21.12■□□□□ 0.97
SP6-202ENST00000536300 CEP164Q9UPV0 1460 aa21.08■□□□□ 0.97
SP6-202ENST00000536300 CENPBP07199 599 aaPredicted RBP21.07■□□□□ 0.96
SP6-202ENST00000536300 P3H3Q8IVL6 736 aa21.04■□□□□ 0.96
SP6-202ENST00000536300 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
SP6-202ENST00000536300 SYNJ1O43426 1573 aa21.03■□□□□ 0.96
SP6-202ENST00000536300 ZNF316A6NFI3 1004 aaPredicted RBP21.02■□□□□ 0.96
SP6-202ENST00000536300 NEUROD1Q13562 356 aa21.02■□□□□ 0.95
SP6-202ENST00000536300 ACIN1Q9UKV3 1341 aaKnown RBP20.94■□□□□ 0.94
SP6-202ENST00000536300 GTF3C3Q9Y5Q9 886 aa20.93■□□□□ 0.94
SP6-202ENST00000536300 KANK4Q5T7N3 995 aaPredicted RBP20.91■□□□□ 0.94
SP6-202ENST00000536300 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.93
SP6-202ENST00000536300 FAM50AQ14320 339 aaKnown RBP20.84■□□□□ 0.93
SP6-202ENST00000536300 MIER1Q8N108 512 aa20.82■□□□□ 0.92
SP6-202ENST00000536300 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
SP6-202ENST00000536300 PEG3Q9GZU2 1588 aa20.75■□□□□ 0.91
SP6-202ENST00000536300 ARID3CA6NKF2 412 aa20.73■□□□□ 0.91
SP6-202ENST00000536300 CUX2O14529 1486 aa20.7■□□□□ 0.9
SP6-202ENST00000536300 KIF21BO75037 1637 aa20.69■□□□□ 0.9
SP6-202ENST00000536300 NCAPD3P42695 1498 aa20.64■□□□□ 0.89
SP6-202ENST00000536300 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
SP6-202ENST00000536300 CUX1P39880 1505 aa20.61■□□□□ 0.89
SP6-202ENST00000536300 DNAJC5BQ9UF47 199 aa20.6■□□□□ 0.89
SP6-202ENST00000536300 CARMIL1Q5VZK9 1371 aa20.58■□□□□ 0.89
SP6-202ENST00000536300 FBLN2P98095 1184 aa20.58■□□□□ 0.89
SP6-202ENST00000536300 ARAP1Q96P48 1450 aa20.58■□□□□ 0.88
SP6-202ENST00000536300 CADPSQ9ULU8 1353 aa20.54■□□□□ 0.88
SP6-202ENST00000536300 PRXQ9BXM0 1461 aa20.54■□□□□ 0.88
SP6-202ENST00000536300 HIRIP3Q9BW71 556 aaPredicted RBP20.53■□□□□ 0.88
SP6-202ENST00000536300 CCNB3Q8WWL7 1395 aa20.51■□□□□ 0.87
SP6-202ENST00000536300 CFTRP13569 1480 aa20.51■□□□□ 0.87
SP6-202ENST00000536300 IGF1RP08069 1367 aa20.5■□□□□ 0.87
SP6-202ENST00000536300 SIN3AQ96ST3 1273 aa20.48■□□□□ 0.87
SP6-202ENST00000536300 DHX57Q6P158 1386 aaKnown RBP20.47■□□□□ 0.87
SP6-202ENST00000536300 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
SP6-202ENST00000536300 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
SP6-202ENST00000536300 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
SP6-202ENST00000536300 ARHGAP35Q9NRY4 1499 aa20.42■□□□□ 0.86
SP6-202ENST00000536300 RAD54L2Q9Y4B4 1467 aa20.4■□□□□ 0.86
SP6-202ENST00000536300 TDRD9Q8NDG6 1382 aaKnown RBP20.38■□□□□ 0.85
SP6-202ENST00000536300 DDX10Q13206 875 aaKnown RBP20.38■□□□□ 0.85
SP6-202ENST00000536300 ERICH3Q5RHP9 1530 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms