RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
HS3ST1-201ENST00000002596 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.84
HS3ST1-201ENST00000002596 ERICH6Q7L0X2 663 aa19.93■□□□□ 0.78
HS3ST1-201ENST00000002596 EHMT2Q96KQ7 1210 aa19.84■□□□□ 0.77
HS3ST1-201ENST00000002596 MYT1Q01538 1121 aa19.83■□□□□ 0.77
HS3ST1-201ENST00000002596 SUPT5HO00267 1087 aaKnown RBP19.45■□□□□ 0.7
HS3ST1-201ENST00000002596 FAM9AQ8IZU1 332 aaPredicted RBP19.41■□□□□ 0.7
HS3ST1-201ENST00000002596 CCER1Q8TC90 406 aaPredicted RBP19.35■□□□□ 0.69
HS3ST1-201ENST00000002596 APLP2Q06481 763 aa19.23■□□□□ 0.67
HS3ST1-201ENST00000002596 TTBK1Q5TCY1 1321 aaPredicted RBP19.16■□□□□ 0.66
HS3ST1-201ENST00000002596 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
HS3ST1-201ENST00000002596 DAXXQ9UER7 740 aaPredicted RBP18.8■□□□□ 0.6
HS3ST1-201ENST00000002596 RANGAP1P46060 587 aaPredicted RBP18.71■□□□□ 0.59
HS3ST1-201ENST00000002596 CENPBP07199 599 aaPredicted RBP18.71■□□□□ 0.59
HS3ST1-201ENST00000002596 NEFLP07196 543 aa18.7■□□□□ 0.58
HS3ST1-201ENST00000002596 YTHDC1Q96MU7 727 aaKnown RBP18.7■□□□□ 0.58
HS3ST1-201ENST00000002596 PCGF6Q9BYE7 350 aa18.67■□□□□ 0.58
HS3ST1-201ENST00000002596 ATP1B4Q9UN42 357 aaPredicted RBP18.66■□□□□ 0.58
HS3ST1-201ENST00000002596 NISCHQ9Y2I1 1504 aa18.49■□□□□ 0.55
HS3ST1-201ENST00000002596 CNGB1Q14028 1251 aaPredicted RBP18.4■□□□□ 0.54
HS3ST1-201ENST00000002596 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
HS3ST1-201ENST00000002596 POLR3GLQ9BT43 218 aa18.37■□□□□ 0.53
HS3ST1-201ENST00000002596 ZNF316A6NFI3 1004 aaPredicted RBP18.28■□□□□ 0.52
HS3ST1-201ENST00000002596 MYT1LQ9UL68 1186 aa18.26■□□□□ 0.51
HS3ST1-201ENST00000002596 SLC4A1APQ9BWU0 796 aaKnown RBP18.24■□□□□ 0.51
HS3ST1-201ENST00000002596 ZEB1P37275 1124 aaPredicted RBP18.23■□□□□ 0.51
HS3ST1-201ENST00000002596 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
HS3ST1-201ENST00000002596 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
HS3ST1-201ENST00000002596 RTL5Q5HYW3 569 aaPredicted RBP18.1■□□□□ 0.49
HS3ST1-201ENST00000002596 UBTFP17480 764 aaKnown RBP18.02■□□□□ 0.48
HS3ST1-201ENST00000002596 TRIM41Q8WV44 630 aa17.94■□□□□ 0.46
HS3ST1-201ENST00000002596 SLC24A1O60721 1099 aa17.93■□□□□ 0.46
HS3ST1-201ENST00000002596 PPARGC1BQ86YN6 1023 aaKnown RBP17.86■□□□□ 0.45
HS3ST1-201ENST00000002596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.44
HS3ST1-201ENST00000002596 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.44
HS3ST1-201ENST00000002596 EIF5BO60841 1220 aaKnown RBP17.71■□□□□ 0.42
HS3ST1-201ENST00000002596 ITGAEP38570 1179 aa17.7■□□□□ 0.42
HS3ST1-201ENST00000002596 ZBTB47Q9UFB7 747 aaPredicted RBP17.67■□□□□ 0.42
HS3ST1-201ENST00000002596 BCANQ96GW7 911 aa17.47■□□□□ 0.39
HS3ST1-201ENST00000002596 HRCP23327 699 aa17.42■□□□□ 0.38
HS3ST1-201ENST00000002596 TRIM26Q12899 539 aaPredicted RBP17.41■□□□□ 0.38
HS3ST1-201ENST00000002596 CANXP27824 592 aaKnown RBP17.35■□□□□ 0.37
HS3ST1-201ENST00000002596 CDK11BP21127 795 aaKnown RBP17.31■□□□□ 0.36
HS3ST1-201ENST00000002596 CDK11AQ9UQ88 783 aaPredicted RBP17.31■□□□□ 0.36
HS3ST1-201ENST00000002596 ARXQ96QS3 562 aa17.31■□□□□ 0.36
HS3ST1-201ENST00000002596 TULP1O00294 542 aaPredicted RBP17.31■□□□□ 0.36
HS3ST1-201ENST00000002596 NCBP3Q53F19 620 aaKnown RBP17.31■□□□□ 0.36
HS3ST1-201ENST00000002596 ANP32BQ92688 251 aaKnown RBP17.29■□□□□ 0.36
HS3ST1-201ENST00000002596 NPM2Q86SE8 214 aaKnown RBP17.27■□□□□ 0.36
HS3ST1-201ENST00000002596 GLIPR1L2Q4G1C9 344 aa17.23■□□□□ 0.35
HS3ST1-201ENST00000002596 HSP90AA1P07900 732 aaKnown RBP17.2■□□□□ 0.34
HS3ST1-201ENST00000002596 DIEXFQ68CQ4 756 aaKnown RBP17.2■□□□□ 0.34
HS3ST1-201ENST00000002596 NEFMP07197 916 aa17.18■□□□□ 0.34
HS3ST1-201ENST00000002596 ZNF326Q5BKZ1 582 aaKnown RBP17.08■□□□□ 0.33
HS3ST1-201ENST00000002596 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
HS3ST1-201ENST00000002596 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
HS3ST1-201ENST00000002596 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
HS3ST1-201ENST00000002596 NEUROD1Q13562 356 aa17.06■□□□□ 0.32
HS3ST1-201ENST00000002596 FAM50AQ14320 339 aaKnown RBP17.06■□□□□ 0.32
HS3ST1-201ENST00000002596 A0A0G2JS52 829 aa17.05■□□□□ 0.32
HS3ST1-201ENST00000002596 LOC105371045A0A1W2PR82 267 aa17.01■□□□□ 0.31
HS3ST1-201ENST00000002596 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
HS3ST1-201ENST00000002596 ANP32AP39687 249 aaKnown RBP16.99■□□□□ 0.31
HS3ST1-201ENST00000002596 ANP32CO43423 234 aa16.96■□□□□ 0.31
HS3ST1-201ENST00000002596 NBR1Q14596 966 aa16.89■□□□□ 0.29
HS3ST1-201ENST00000002596 ESF1Q9H501 851 aaKnown RBP16.89■□□□□ 0.29
HS3ST1-201ENST00000002596 TPRNQ4KMQ1 711 aa16.88■□□□□ 0.29
HS3ST1-201ENST00000002596 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
HS3ST1-201ENST00000002596 FBLN2P98095 1184 aa16.82■□□□□ 0.28
HS3ST1-201ENST00000002596 PLEKHG5O94827 1062 aa16.81■□□□□ 0.28
HS3ST1-201ENST00000002596 TAOK2Q9UL54 1235 aa16.79■□□□□ 0.28
HS3ST1-201ENST00000002596 UPF2Q9HAU5 1272 aaKnown RBP16.74■□□□□ 0.27
HS3ST1-201ENST00000002596 TNNT2P45379 298 aaPredicted RBP16.74■□□□□ 0.27
HS3ST1-201ENST00000002596 PRM3Q9NNZ6 103 aa16.73■□□□□ 0.27
HS3ST1-201ENST00000002596 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.27
HS3ST1-201ENST00000002596 CLSTN1O94985 981 aa16.68■□□□□ 0.26
HS3ST1-201ENST00000002596 SALL2Q9Y467 1007 aaPredicted RBP16.65■□□□□ 0.26
HS3ST1-201ENST00000002596 DNTTIP2Q5QJE6 756 aaKnown RBP16.64■□□□□ 0.25
HS3ST1-201ENST00000002596 ZBTB7CA1YPR0 619 aa16.62■□□□□ 0.25
HS3ST1-201ENST00000002596 TRIM44Q96DX7 344 aaPredicted RBP16.59■□□□□ 0.25
HS3ST1-201ENST00000002596 NCLP19338 710 aaKnown RBP16.55■□□□□ 0.24
HS3ST1-201ENST00000002596 FKBP8Q14318 412 aa16.55■□□□□ 0.24
HS3ST1-201ENST00000002596 PTMAP06454 111 aaKnown RBP16.54■□□□□ 0.24
HS3ST1-201ENST00000002596 ZRSR1Q15695 479 aaKnown RBP16.54■□□□□ 0.24
HS3ST1-201ENST00000002596 FBXO3Q9UK99 471 aa16.51■□□□□ 0.23
HS3ST1-201ENST00000002596 NPM1P06748 294 aaKnown RBP eCLIP16.5■□□□□ 0.23
HS3ST1-201ENST00000002596 CHGAP10645 457 aaKnown RBP16.48■□□□□ 0.23
HS3ST1-201ENST00000002596 ZNF777Q9ULD5 760 aaPredicted RBP16.48■□□□□ 0.23
HS3ST1-201ENST00000002596 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
HS3ST1-201ENST00000002596 PLCB2Q00722 1185 aa16.47■□□□□ 0.23
HS3ST1-201ENST00000002596 ARID3CA6NKF2 412 aa16.45■□□□□ 0.22
HS3ST1-201ENST00000002596 ACIN1Q9UKV3 1341 aaKnown RBP16.45■□□□□ 0.22
HS3ST1-201ENST00000002596 PDE4CQ08493 712 aa16.44■□□□□ 0.22
HS3ST1-201ENST00000002596 ANO8Q9HCE9 1232 aaPredicted RBP16.42■□□□□ 0.22
HS3ST1-201ENST00000002596 FAM9BQ8IZU0 186 aa16.41■□□□□ 0.22
HS3ST1-201ENST00000002596 NAP1L5Q96NT1 182 aaPredicted RBP16.41■□□□□ 0.22
HS3ST1-201ENST00000002596 RTN4Q9NQC3 1192 aaKnown RBP16.41■□□□□ 0.22
HS3ST1-201ENST00000002596 MYH16Q9H6N6 1097 aa16.41■□□□□ 0.22
HS3ST1-201ENST00000002596 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.4■□□□□ 0.22
HS3ST1-201ENST00000002596 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms