RNA–Protein interactions for RNA: ENST00000543870.1

LDLRAD2-203, Transcript of low density lipoprotein receptor class A domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD2, Length 1,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD2-203ENST00000543870 NISCHQ9Y2I1 1504 aa42.45■■■■■ 4.39
LDLRAD2-203ENST00000543870 CCDC180Q9P1Z9 1646 aa37.97■■■■□ 3.67
LDLRAD2-203ENST00000543870 ABCC9O60706 1549 aa37.82■■■■□ 3.65
LDLRAD2-203ENST00000543870 RB1CC1Q8TDY2 1594 aa35.89■■■■□ 3.34
LDLRAD2-203ENST00000543870 NACADO15069 1562 aa35.69■■■■□ 3.3
LDLRAD2-203ENST00000543870 DNAJC5BQ9UF47 199 aa35.59■■■■□ 3.29
LDLRAD2-203ENST00000543870 DCAF8L2P0C7V8 631 aa35.48■■■■□ 3.27
LDLRAD2-203ENST00000543870 MYO15BQ96JP2 1530 aa35.34■■■■□ 3.25
LDLRAD2-203ENST00000543870 ZCCHC6Q5VYS8 1495 aaKnown RBP35.31■■■■□ 3.24
LDLRAD2-203ENST00000543870 UNC13AQ9UPW8 1703 aa35.25■■■■□ 3.23
LDLRAD2-203ENST00000543870 PABPN1Q86U42 306 aaKnown RBP eCLIP35.16■■■■□ 3.22
LDLRAD2-203ENST00000543870 DCAF1Q9Y4B6 1507 aa35.07■■■■□ 3.21
LDLRAD2-203ENST00000543870 BICRAQ9NZM4 1560 aa34.87■■■■□ 3.17
LDLRAD2-203ENST00000543870 SCRIBQ14160 1630 aa34.63■■■■□ 3.13
LDLRAD2-203ENST00000543870 SHROOM4Q9ULL8 1493 aa34.31■■■■□ 3.08
LDLRAD2-203ENST00000543870 CC2D2AQ9P2K1 1620 aa34.16■■■■□ 3.06
LDLRAD2-203ENST00000543870 CECR2Q9BXF3 1484 aa34.07■■■■□ 3.04
LDLRAD2-203ENST00000543870 EIF4G1Q04637 1599 aaKnown RBP34.02■■■■□ 3.04
LDLRAD2-203ENST00000543870 SMARCA4P51532 1647 aa33.07■■■□□ 2.88
LDLRAD2-203ENST00000543870 BAZ1AQ9NRL2 1556 aaPredicted RBP32.92■■■□□ 2.86
LDLRAD2-203ENST00000543870 NCAPD3P42695 1498 aa32.91■■■□□ 2.86
LDLRAD2-203ENST00000543870 ATAD2BQ9ULI0 1458 aa32.91■■■□□ 2.86
LDLRAD2-203ENST00000543870 SMARCA2P51531 1590 aa32.83■■■□□ 2.85
LDLRAD2-203ENST00000543870 DNAJC5Q9H3Z4 198 aa32.79■■■□□ 2.84
LDLRAD2-203ENST00000543870 HMGXB3Q12766 1538 aa32.77■■■□□ 2.84
LDLRAD2-203ENST00000543870 MROH2BQ7Z745 1585 aa32.75■■■□□ 2.83
LDLRAD2-203ENST00000543870 PEG3Q9GZU2 1588 aa32.73■■■□□ 2.83
LDLRAD2-203ENST00000543870 ERCC6Q03468 1493 aa32.67■■■□□ 2.82
LDLRAD2-203ENST00000543870 CUX2O14529 1486 aa32.63■■■□□ 2.81
LDLRAD2-203ENST00000543870 BAZ1BQ9UIG0 1483 aaKnown RBP32.61■■■□□ 2.81
LDLRAD2-203ENST00000543870 WIZO95785 1651 aa32.44■■■□□ 2.78
LDLRAD2-203ENST00000543870 NESP48681 1621 aa32.44■■■□□ 2.78
LDLRAD2-203ENST00000543870 RSF1Q96T23 1441 aaPredicted RBP32.19■■■□□ 2.74
LDLRAD2-203ENST00000543870 THOC2Q8NI27 1593 aaKnown RBP32.16■■■□□ 2.74
LDLRAD2-203ENST00000543870 LAMC3Q9Y6N6 1575 aa32.15■■■□□ 2.74
LDLRAD2-203ENST00000543870 KIF21AQ7Z4S6 1674 aa32.07■■■□□ 2.72
LDLRAD2-203ENST00000543870 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
LDLRAD2-203ENST00000543870 PDS5BQ9NTI5 1447 aa31.94■■■□□ 2.7
LDLRAD2-203ENST00000543870 CADPSQ9ULU8 1353 aa31.91■■■□□ 2.7
LDLRAD2-203ENST00000543870 MRC2Q9UBG0 1479 aa31.72■■■□□ 2.67
LDLRAD2-203ENST00000543870 CFTRP13569 1480 aa31.69■■■□□ 2.66
LDLRAD2-203ENST00000543870 WDR62O43379 1518 aa31.65■■■□□ 2.66
LDLRAD2-203ENST00000543870 PRDM2Q13029 1718 aa31.61■■■□□ 2.65
LDLRAD2-203ENST00000543870 CCDC88BA6NC98 1476 aa31.59■■■□□ 2.65
LDLRAD2-203ENST00000543870 FANCD2Q9BXW9 1451 aa31.59■■■□□ 2.65
LDLRAD2-203ENST00000543870 CEP164Q9UPV0 1460 aa31.58■■■□□ 2.65
LDLRAD2-203ENST00000543870 TRIM41Q8WV44 630 aa31.37■■■□□ 2.61
LDLRAD2-203ENST00000543870 URB2Q14146 1524 aaKnown RBP31.35■■■□□ 2.61
LDLRAD2-203ENST00000543870 TOPBP1Q92547 1522 aa31.08■■■□□ 2.57
LDLRAD2-203ENST00000543870 OSCARQ8IYS5 282 aa31.07■■■□□ 2.56
LDLRAD2-203ENST00000543870 SUPT5HO00267 1087 aaKnown RBP31.04■■■□□ 2.56
LDLRAD2-203ENST00000543870 DNMBPQ6XZF7 1577 aa31.02■■■□□ 2.56
LDLRAD2-203ENST00000543870 ABCC8Q09428 1581 aa30.96■■■□□ 2.55
LDLRAD2-203ENST00000543870 ZNF608Q9ULD9 1512 aaPredicted RBP30.91■■■□□ 2.54
LDLRAD2-203ENST00000543870 IFT140Q96RY7 1462 aa30.9■■■□□ 2.54
LDLRAD2-203ENST00000543870 TARBP1Q13395 1621 aaKnown RBP30.82■■■□□ 2.52
LDLRAD2-203ENST00000543870 RIMBP3CA6NJZ7 1639 aa30.8■■■□□ 2.52
LDLRAD2-203ENST00000543870 RIMBP3BA6NNM3 1639 aa30.8■■■□□ 2.52
LDLRAD2-203ENST00000543870 RIMBP3Q9UFD9 1639 aa30.8■■■□□ 2.52
LDLRAD2-203ENST00000543870 EIF4G3O43432 1585 aaKnown RBP30.79■■■□□ 2.52
LDLRAD2-203ENST00000543870 POLA1P09884 1462 aaPredicted RBP30.79■■■□□ 2.52
LDLRAD2-203ENST00000543870 CUX1P39880 1505 aa30.75■■■□□ 2.51
LDLRAD2-203ENST00000543870 FGD5Q6ZNL6 1462 aa30.67■■■□□ 2.5
LDLRAD2-203ENST00000543870 RAD54L2Q9Y4B4 1467 aa30.67■■■□□ 2.5
LDLRAD2-203ENST00000543870 ARHGEF11O15085 1522 aa30.64■■■□□ 2.5
LDLRAD2-203ENST00000543870 AQRO60306 1485 aaKnown RBP eCLIP30.62■■■□□ 2.49
LDLRAD2-203ENST00000543870 CHD1O14646 1710 aa30.61■■■□□ 2.49
LDLRAD2-203ENST00000543870 SOGA1O94964 1423 aa30.58■■■□□ 2.49
LDLRAD2-203ENST00000543870 WDR97A6NE52 1622 aa30.56■■■□□ 2.48
LDLRAD2-203ENST00000543870 TDRD9Q8NDG6 1382 aaKnown RBP30.48■■■□□ 2.47
LDLRAD2-203ENST00000543870 FBLN2P98095 1184 aa30.45■■■□□ 2.47
LDLRAD2-203ENST00000543870 BIVM-ERCC5R4GMW8 1640 aa30.43■■■□□ 2.46
LDLRAD2-203ENST00000543870 CYB5RLQ6IPT4 315 aa30.4■■■□□ 2.46
LDLRAD2-203ENST00000543870 SYNJ1O43426 1573 aa30.4■■■□□ 2.46
LDLRAD2-203ENST00000543870 TOP2BQ02880 1626 aa30.38■■■□□ 2.45
LDLRAD2-203ENST00000543870 PBRM1Q86U86 1689 aa30.37■■■□□ 2.45
LDLRAD2-203ENST00000543870 SNAPC4Q5SXM2 1469 aa30.35■■■□□ 2.45
LDLRAD2-203ENST00000543870 ARAP1Q96P48 1450 aa30.33■■■□□ 2.45
LDLRAD2-203ENST00000543870 WRNQ14191 1432 aaPredicted RBP eCLIP30.33■■■□□ 2.45
LDLRAD2-203ENST00000543870 ABCA5Q8WWZ7 1642 aa30.33■■■□□ 2.45
LDLRAD2-203ENST00000543870 ABCA10Q8WWZ4 1543 aa30.32■■■□□ 2.44
LDLRAD2-203ENST00000543870 GRIN2BQ13224 1484 aa30.29■■■□□ 2.44
LDLRAD2-203ENST00000543870 GAPVD1Q14C86 1478 aa30.25■■■□□ 2.43
LDLRAD2-203ENST00000543870 MAGI1Q96QZ7 1491 aaPredicted RBP30.25■■■□□ 2.43
LDLRAD2-203ENST00000543870 CLASP1Q7Z460 1538 aa30.19■■■□□ 2.42
LDLRAD2-203ENST00000543870 TRHP20396 242 aaPredicted RBP30.15■■■□□ 2.42
LDLRAD2-203ENST00000543870 CHMP7Q8WUX9 453 aaPredicted RBP30.15■■■□□ 2.42
LDLRAD2-203ENST00000543870 SYNJ2O15056 1496 aa30.14■■■□□ 2.42
LDLRAD2-203ENST00000543870 ADAMTS12P58397 1594 aa30.05■■■□□ 2.4
LDLRAD2-203ENST00000543870 ERICH3Q5RHP9 1530 aa29.96■■■□□ 2.39
LDLRAD2-203ENST00000543870 GRIN2AQ12879 1464 aa29.93■■■□□ 2.38
LDLRAD2-203ENST00000543870 CEP170Q5SW79 1584 aa29.87■■■□□ 2.37
LDLRAD2-203ENST00000543870 FHAD1B1AJZ9 1412 aa29.87■■■□□ 2.37
LDLRAD2-203ENST00000543870 NUP160Q12769 1436 aa29.81■■■□□ 2.36
LDLRAD2-203ENST00000543870 ERCC6L2Q5T890 1561 aa29.73■■■□□ 2.35
LDLRAD2-203ENST00000543870 SHROOM2Q13796 1616 aa29.71■■■□□ 2.35
LDLRAD2-203ENST00000543870 KIF27Q86VH2 1401 aa29.69■■■□□ 2.34
LDLRAD2-203ENST00000543870 CUL7Q14999 1698 aa29.66■■■□□ 2.34
LDLRAD2-203ENST00000543870 IGF1RP08069 1367 aa29.64■■■□□ 2.33
LDLRAD2-203ENST00000543870 RUSC2Q8N2Y8 1516 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 212 ms