RNA–Protein interactions for RNA: ENST00000334919.9

CELF4-201, Transcript of CUGBP Elav-like family member 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 3,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-201ENST00000334919 NISCHQ9Y2I1 1504 aa25.33■■□□□ 1.65
CELF4-201ENST00000334919 HRCP23327 699 aa23.09■■□□□ 1.29
CELF4-201ENST00000334919 SHROOM4Q9ULL8 1493 aa23.07■■□□□ 1.28
CELF4-201ENST00000334919 SUPT5HO00267 1087 aaKnown RBP23■■□□□ 1.27
CELF4-201ENST00000334919 PPARGC1BQ86YN6 1023 aaKnown RBP22.92■■□□□ 1.26
CELF4-201ENST00000334919 PCGF6Q9BYE7 350 aa22.85■■□□□ 1.25
CELF4-201ENST00000334919 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
CELF4-201ENST00000334919 CHIC1Q5VXU3 224 aa22.38■■□□□ 1.17
CELF4-201ENST00000334919 PELP1Q8IZL8 1130 aaKnown RBP22.12■■□□□ 1.13
CELF4-201ENST00000334919 LOC105371045A0A1W2PR82 267 aa22.09■■□□□ 1.13
CELF4-201ENST00000334919 SCAF1Q9H7N4 1312 aaKnown RBP21.98■■□□□ 1.11
CELF4-201ENST00000334919 TRIM26Q12899 539 aaPredicted RBP21.85■■□□□ 1.09
CELF4-201ENST00000334919 DCAF8L2P0C7V8 631 aa21.8■■□□□ 1.08
CELF4-201ENST00000334919 DCAF1Q9Y4B6 1507 aa21.79■■□□□ 1.08
CELF4-201ENST00000334919 ZEB1P37275 1124 aaPredicted RBP21.56■■□□□ 1.04
CELF4-201ENST00000334919 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.04
CELF4-201ENST00000334919 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
CELF4-201ENST00000334919 EHMT2Q96KQ7 1210 aa21.5■■□□□ 1.03
CELF4-201ENST00000334919 NEUROD1Q13562 356 aa21.4■■□□□ 1.02
CELF4-201ENST00000334919 FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
CELF4-201ENST00000334919 ACIN1Q9UKV3 1341 aaKnown RBP21.35■■□□□ 1.01
CELF4-201ENST00000334919 GTF3C3Q9Y5Q9 886 aa21.31■■□□□ 1
CELF4-201ENST00000334919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.18■□□□□ 0.98
CELF4-201ENST00000334919 MYT1Q01538 1121 aa21.16■□□□□ 0.98
CELF4-201ENST00000334919 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
CELF4-201ENST00000334919 CCER1Q8TC90 406 aaPredicted RBP21.08■□□□□ 0.97
CELF4-201ENST00000334919 CENPBP07199 599 aaPredicted RBP21.07■□□□□ 0.96
CELF4-201ENST00000334919 DIEXFQ68CQ4 756 aaKnown RBP21.04■□□□□ 0.96
CELF4-201ENST00000334919 YTHDC1Q96MU7 727 aaKnown RBP20.98■□□□□ 0.95
CELF4-201ENST00000334919 TTBK1Q5TCY1 1321 aaPredicted RBP20.96■□□□□ 0.95
CELF4-201ENST00000334919 MIER1Q8N108 512 aa20.54■□□□□ 0.88
CELF4-201ENST00000334919 ZNF316A6NFI3 1004 aaPredicted RBP20.54■□□□□ 0.88
CELF4-201ENST00000334919 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
CELF4-201ENST00000334919 RB1CC1Q8TDY2 1594 aa20.5■□□□□ 0.87
CELF4-201ENST00000334919 ABCC9O60706 1549 aa20.45■□□□□ 0.86
CELF4-201ENST00000334919 HNRNPUL2Q1KMD3 747 aaKnown RBP20.26■□□□□ 0.83
CELF4-201ENST00000334919 SCRIBQ14160 1630 aa20.25■□□□□ 0.83
CELF4-201ENST00000334919 SUPT16HQ9Y5B9 1047 aaKnown RBP20.18■□□□□ 0.82
CELF4-201ENST00000334919 BCL11AQ9H165 835 aa20.18■□□□□ 0.82
CELF4-201ENST00000334919 ANP32EQ9BTT0 268 aa20.11■□□□□ 0.81
CELF4-201ENST00000334919 UBTFP17480 764 aaKnown RBP20.1■□□□□ 0.81
CELF4-201ENST00000334919 TSHZ2Q9NRE2 1034 aa20.1■□□□□ 0.81
CELF4-201ENST00000334919 CEP162Q5TB80 1403 aa20.09■□□□□ 0.81
CELF4-201ENST00000334919 BCANQ96GW7 911 aa20.03■□□□□ 0.8
CELF4-201ENST00000334919 CECR2Q9BXF3 1484 aa20.03■□□□□ 0.8
CELF4-201ENST00000334919 CSRNP3Q8WYN3 585 aa20.02■□□□□ 0.8
CELF4-201ENST00000334919 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
CELF4-201ENST00000334919 RANGAP1P46060 587 aaPredicted RBP19.93■□□□□ 0.78
CELF4-201ENST00000334919 MROH2BQ7Z745 1585 aa19.93■□□□□ 0.78
CELF4-201ENST00000334919 CCDC88BA6NC98 1476 aa19.91■□□□□ 0.78
CELF4-201ENST00000334919 SOGA1O94964 1423 aa19.9■□□□□ 0.78
CELF4-201ENST00000334919 ABCC8Q09428 1581 aa19.89■□□□□ 0.77
CELF4-201ENST00000334919 WIZO95785 1651 aa19.86■□□□□ 0.77
CELF4-201ENST00000334919 KCNH8Q96L42 1107 aa19.84■□□□□ 0.77
CELF4-201ENST00000334919 TNIKQ9UKE5 1360 aa19.83■□□□□ 0.76
CELF4-201ENST00000334919 SLC24A1O60721 1099 aa19.81■□□□□ 0.76
CELF4-201ENST00000334919 CLSPNQ9HAW4 1339 aa19.79■□□□□ 0.76
CELF4-201ENST00000334919 RUSC2Q8N2Y8 1516 aa19.79■□□□□ 0.76
CELF4-201ENST00000334919 FKBP8Q14318 412 aa19.75■□□□□ 0.75
CELF4-201ENST00000334919 APLP2Q06481 763 aa19.73■□□□□ 0.75
CELF4-201ENST00000334919 ITGAEP38570 1179 aa19.69■□□□□ 0.74
CELF4-201ENST00000334919 NACADO15069 1562 aa19.65■□□□□ 0.74
CELF4-201ENST00000334919 RBM19Q9Y4C8 960 aaKnown RBP19.64■□□□□ 0.74
CELF4-201ENST00000334919 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
CELF4-201ENST00000334919 GOLGA3Q08378 1498 aa19.58■□□□□ 0.72
CELF4-201ENST00000334919 DHX57Q6P158 1386 aaKnown RBP19.55■□□□□ 0.72
CELF4-201ENST00000334919 CLIP1P30622 1438 aa19.55■□□□□ 0.72
CELF4-201ENST00000334919 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
CELF4-201ENST00000334919 TRIM52Q96A61 297 aa19.52■□□□□ 0.72
CELF4-201ENST00000334919 NEFLP07196 543 aa19.51■□□□□ 0.71
CELF4-201ENST00000334919 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
CELF4-201ENST00000334919 MSH5O43196 834 aa19.48■□□□□ 0.71
CELF4-201ENST00000334919 EEA1Q15075 1411 aa19.45■□□□□ 0.7
CELF4-201ENST00000334919 VPS8Q8N3P4 1428 aa19.44■□□□□ 0.7
CELF4-201ENST00000334919 HIRIP3Q9BW71 556 aaPredicted RBP19.43■□□□□ 0.7
CELF4-201ENST00000334919 ERICH6Q7L0X2 663 aa19.41■□□□□ 0.7
CELF4-201ENST00000334919 IRX6P78412 446 aaPredicted RBP19.38■□□□□ 0.69
CELF4-201ENST00000334919 KANK4Q5T7N3 995 aaPredicted RBP19.38■□□□□ 0.69
CELF4-201ENST00000334919 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
CELF4-201ENST00000334919 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
CELF4-201ENST00000334919 TOP2AP11388 1531 aaKnown RBP19.31■□□□□ 0.68
CELF4-201ENST00000334919 RAPGEF2Q9Y4G8 1499 aa19.29■□□□□ 0.68
CELF4-201ENST00000334919 PRKCSHP14314 528 aaPredicted RBP19.29■□□□□ 0.68
CELF4-201ENST00000334919 SIN3AQ96ST3 1273 aa19.24■□□□□ 0.67
CELF4-201ENST00000334919 KIF21BO75037 1637 aa19.23■□□□□ 0.67
CELF4-201ENST00000334919 CDK11AQ9UQ88 783 aaPredicted RBP19.19■□□□□ 0.66
CELF4-201ENST00000334919 ANP32CO43423 234 aa19.18■□□□□ 0.66
CELF4-201ENST00000334919 DEKP35659 375 aaKnown RBP19.16■□□□□ 0.66
CELF4-201ENST00000334919 NBR1Q14596 966 aa19.13■□□□□ 0.65
CELF4-201ENST00000334919 PPP1R15AO75807 674 aaPredicted RBP19.13■□□□□ 0.65
CELF4-201ENST00000334919 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
CELF4-201ENST00000334919 RAB3GAP2Q9H2M9 1393 aa19.12■□□□□ 0.65
CELF4-201ENST00000334919 HNRNPUQ00839 825 aaKnown RBP eCLIP19.11■□□□□ 0.65
CELF4-201ENST00000334919 FANCIQ9NVI1 1328 aa19.11■□□□□ 0.65
CELF4-201ENST00000334919 SMARCA4P51532 1647 aa19.1■□□□□ 0.65
CELF4-201ENST00000334919 CCNB3Q8WWL7 1395 aa19.09■□□□□ 0.65
CELF4-201ENST00000334919 WDR97A6NE52 1622 aa19.08■□□□□ 0.64
CELF4-201ENST00000334919 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
CELF4-201ENST00000334919 BAZ1BQ9UIG0 1483 aaKnown RBP19.04■□□□□ 0.64
CELF4-201ENST00000334919 ANO8Q9HCE9 1232 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms