RNA–Protein interactions for RNA: ENST00000278559.7

CAPN5-201, Transcript of calpain 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN5, Length 4,397 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-201ENST00000278559 NISCHQ9Y2I1 1504 aa24.99■■□□□ 1.59
CAPN5-201ENST00000278559 DCAF8L2P0C7V8 631 aa24.14■■□□□ 1.45
CAPN5-201ENST00000278559 SUPT5HO00267 1087 aaKnown RBP22.99■■□□□ 1.27
CAPN5-201ENST00000278559 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
CAPN5-201ENST00000278559 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
CAPN5-201ENST00000278559 FAM9AQ8IZU1 332 aaPredicted RBP21.53■■□□□ 1.04
CAPN5-201ENST00000278559 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
CAPN5-201ENST00000278559 APLP2Q06481 763 aa21.32■■□□□ 1
CAPN5-201ENST00000278559 ABCC9O60706 1549 aa21.15■□□□□ 0.98
CAPN5-201ENST00000278559 PCGF6Q9BYE7 350 aa21.09■□□□□ 0.97
CAPN5-201ENST00000278559 UBTFP17480 764 aaKnown RBP20.95■□□□□ 0.94
CAPN5-201ENST00000278559 TTBK1Q5TCY1 1321 aaPredicted RBP20.95■□□□□ 0.94
CAPN5-201ENST00000278559 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
CAPN5-201ENST00000278559 RANGAP1P46060 587 aaPredicted RBP20.91■□□□□ 0.94
CAPN5-201ENST00000278559 ZCCHC6Q5VYS8 1495 aaKnown RBP20.77■□□□□ 0.92
CAPN5-201ENST00000278559 CCDC180Q9P1Z9 1646 aa20.76■□□□□ 0.91
CAPN5-201ENST00000278559 PABPN1Q86U42 306 aaKnown RBP eCLIP20.74■□□□□ 0.91
CAPN5-201ENST00000278559 ZEB1P37275 1124 aaPredicted RBP20.66■□□□□ 0.9
CAPN5-201ENST00000278559 ATP1B4Q9UN42 357 aaPredicted RBP20.65■□□□□ 0.9
CAPN5-201ENST00000278559 LOC105371045A0A1W2PR82 267 aa20.63■□□□□ 0.89
CAPN5-201ENST00000278559 CCER1Q8TC90 406 aaPredicted RBP20.6■□□□□ 0.89
CAPN5-201ENST00000278559 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
CAPN5-201ENST00000278559 PPARGC1BQ86YN6 1023 aaKnown RBP20.48■□□□□ 0.87
CAPN5-201ENST00000278559 SCRIBQ14160 1630 aa20.37■□□□□ 0.85
CAPN5-201ENST00000278559 PELP1Q8IZL8 1130 aaKnown RBP20.2■□□□□ 0.82
CAPN5-201ENST00000278559 HRCP23327 699 aa20.16■□□□□ 0.82
CAPN5-201ENST00000278559 CENPBP07199 599 aaPredicted RBP20.08■□□□□ 0.8
CAPN5-201ENST00000278559 RB1CC1Q8TDY2 1594 aa20.06■□□□□ 0.8
CAPN5-201ENST00000278559 ITGAEP38570 1179 aa20.06■□□□□ 0.8
CAPN5-201ENST00000278559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.05■□□□□ 0.8
CAPN5-201ENST00000278559 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
CAPN5-201ENST00000278559 NACADO15069 1562 aa20.02■□□□□ 0.8
CAPN5-201ENST00000278559 DCAF1Q9Y4B6 1507 aa19.99■□□□□ 0.79
CAPN5-201ENST00000278559 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
CAPN5-201ENST00000278559 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
CAPN5-201ENST00000278559 FAM50AQ14320 339 aaKnown RBP19.72■□□□□ 0.75
CAPN5-201ENST00000278559 YTHDC1Q96MU7 727 aaKnown RBP19.7■□□□□ 0.74
CAPN5-201ENST00000278559 MYT1LQ9UL68 1186 aa19.7■□□□□ 0.74
CAPN5-201ENST00000278559 FBLN2P98095 1184 aa19.62■□□□□ 0.73
CAPN5-201ENST00000278559 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
CAPN5-201ENST00000278559 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
CAPN5-201ENST00000278559 CECR2Q9BXF3 1484 aa19.55■□□□□ 0.72
CAPN5-201ENST00000278559 NEFLP07196 543 aa19.55■□□□□ 0.72
CAPN5-201ENST00000278559 BAZ1BQ9UIG0 1483 aaKnown RBP19.51■□□□□ 0.71
CAPN5-201ENST00000278559 MYO15BQ96JP2 1530 aa19.49■□□□□ 0.71
CAPN5-201ENST00000278559 TRIM52Q96A61 297 aa19.47■□□□□ 0.71
CAPN5-201ENST00000278559 POLR3GLQ9BT43 218 aa19.46■□□□□ 0.71
CAPN5-201ENST00000278559 DIEXFQ68CQ4 756 aaKnown RBP19.45■□□□□ 0.7
CAPN5-201ENST00000278559 EEA1Q15075 1411 aa19.44■□□□□ 0.7
CAPN5-201ENST00000278559 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
CAPN5-201ENST00000278559 NEUROD1Q13562 356 aa19.38■□□□□ 0.69
CAPN5-201ENST00000278559 ARID3CA6NKF2 412 aa19.34■□□□□ 0.69
CAPN5-201ENST00000278559 CDK11AQ9UQ88 783 aaPredicted RBP19.34■□□□□ 0.69
CAPN5-201ENST00000278559 MROH2BQ7Z745 1585 aa19.33■□□□□ 0.68
CAPN5-201ENST00000278559 CLIP1P30622 1438 aa19.3■□□□□ 0.68
CAPN5-201ENST00000278559 GOLGA3Q08378 1498 aa19.27■□□□□ 0.67
CAPN5-201ENST00000278559 CNGB1Q14028 1251 aaPredicted RBP19.22■□□□□ 0.67
CAPN5-201ENST00000278559 ZNF316A6NFI3 1004 aaPredicted RBP19.21■□□□□ 0.67
CAPN5-201ENST00000278559 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
CAPN5-201ENST00000278559 KIF27Q86VH2 1401 aa19.2■□□□□ 0.66
CAPN5-201ENST00000278559 ERICH6Q7L0X2 663 aa19.19■□□□□ 0.66
CAPN5-201ENST00000278559 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
CAPN5-201ENST00000278559 TNIKQ9UKE5 1360 aa19.17■□□□□ 0.66
CAPN5-201ENST00000278559 CEP164Q9UPV0 1460 aa19.15■□□□□ 0.66
CAPN5-201ENST00000278559 CCDC88BA6NC98 1476 aa19.14■□□□□ 0.66
CAPN5-201ENST00000278559 ZNF326Q5BKZ1 582 aaKnown RBP19.11■□□□□ 0.65
CAPN5-201ENST00000278559 CHMP7Q8WUX9 453 aaPredicted RBP19.11■□□□□ 0.65
CAPN5-201ENST00000278559 SMARCA2P51531 1590 aa19.11■□□□□ 0.65
CAPN5-201ENST00000278559 MTUS2Q5JR59 1369 aa19.08■□□□□ 0.65
CAPN5-201ENST00000278559 ANP32CO43423 234 aa19.04■□□□□ 0.64
CAPN5-201ENST00000278559 SLC4A1APQ9BWU0 796 aaKnown RBP19.02■□□□□ 0.64
CAPN5-201ENST00000278559 TOP2AP11388 1531 aaKnown RBP19.02■□□□□ 0.63
CAPN5-201ENST00000278559 SOGA1O94964 1423 aa19.01■□□□□ 0.63
CAPN5-201ENST00000278559 WIZO95785 1651 aa19.01■□□□□ 0.63
CAPN5-201ENST00000278559 TONSLQ96HA7 1378 aa18.96■□□□□ 0.63
CAPN5-201ENST00000278559 CHIC2Q9UKJ5 165 aa18.94■□□□□ 0.62
CAPN5-201ENST00000278559 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
CAPN5-201ENST00000278559 NPM1P06748 294 aaKnown RBP eCLIP18.93■□□□□ 0.62
CAPN5-201ENST00000278559 CUX2O14529 1486 aa18.92■□□□□ 0.62
CAPN5-201ENST00000278559 ATAD2BQ9ULI0 1458 aa18.91■□□□□ 0.62
CAPN5-201ENST00000278559 CARMIL1Q5VZK9 1371 aa18.89■□□□□ 0.62
CAPN5-201ENST00000278559 SMARCA4P51532 1647 aa18.89■□□□□ 0.62
CAPN5-201ENST00000278559 TSPY4P0CV99 314 aa18.88■□□□□ 0.61
CAPN5-201ENST00000278559 TSPY10P0CW01 314 aa18.88■□□□□ 0.61
CAPN5-201ENST00000278559 ERCC6Q03468 1493 aa18.85■□□□□ 0.61
CAPN5-201ENST00000278559 PLEKHD1A6NEE1 506 aa18.81■□□□□ 0.6
CAPN5-201ENST00000278559 PDS5BQ9NTI5 1447 aa18.8■□□□□ 0.6
CAPN5-201ENST00000278559 CADPSQ9ULU8 1353 aa18.8■□□□□ 0.6
CAPN5-201ENST00000278559 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
CAPN5-201ENST00000278559 GTF3C3Q9Y5Q9 886 aa18.77■□□□□ 0.59
CAPN5-201ENST00000278559 RRP7BPQ9NSQ0 103 aa18.74■□□□□ 0.59
CAPN5-201ENST00000278559 VPS8Q8N3P4 1428 aa18.73■□□□□ 0.59
CAPN5-201ENST00000278559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.71■□□□□ 0.59
CAPN5-201ENST00000278559 DDX10Q13206 875 aaKnown RBP18.7■□□□□ 0.58
CAPN5-201ENST00000278559 ACIN1Q9UKV3 1341 aaKnown RBP18.7■□□□□ 0.58
CAPN5-201ENST00000278559 CFDP1Q9UEE9 299 aaPredicted RBP18.68■□□□□ 0.58
CAPN5-201ENST00000278559 KCNH8Q96L42 1107 aa18.66■□□□□ 0.58
CAPN5-201ENST00000278559 DAXXQ9UER7 740 aaPredicted RBP18.66■□□□□ 0.58
CAPN5-201ENST00000278559 ESF1Q9H501 851 aaKnown RBP18.65■□□□□ 0.58
CAPN5-201ENST00000278559 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms