RNA–Protein interactions for RNA: ENST00000395925.7

GLI3-201, Transcript of GLI family zinc finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GLI3, Length 8,208 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-201ENST00000395925 DCAF8L2P0C7V8 631 aa20.8■□□□□ 0.92
GLI3-201ENST00000395925 PELP1Q8IZL8 1130 aaKnown RBP20.41■□□□□ 0.86
GLI3-201ENST00000395925 ERICH6Q7L0X2 663 aa19.64■□□□□ 0.73
GLI3-201ENST00000395925 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
GLI3-201ENST00000395925 SUPT5HO00267 1087 aaKnown RBP19.57■□□□□ 0.72
GLI3-201ENST00000395925 CCER1Q8TC90 406 aaPredicted RBP19.48■□□□□ 0.71
GLI3-201ENST00000395925 FAM9AQ8IZU1 332 aaPredicted RBP19.16■□□□□ 0.66
GLI3-201ENST00000395925 APLP2Q06481 763 aa19.13■□□□□ 0.65
GLI3-201ENST00000395925 SHROOM4Q9ULL8 1493 aa19■□□□□ 0.63
GLI3-201ENST00000395925 MYT1Q01538 1121 aa18.96■□□□□ 0.63
GLI3-201ENST00000395925 TTBK1Q5TCY1 1321 aaPredicted RBP18.93■□□□□ 0.62
GLI3-201ENST00000395925 YTHDC1Q96MU7 727 aaKnown RBP18.8■□□□□ 0.6
GLI3-201ENST00000395925 CENPBP07199 599 aaPredicted RBP18.74■□□□□ 0.59
GLI3-201ENST00000395925 DAXXQ9UER7 740 aaPredicted RBP18.71■□□□□ 0.59
GLI3-201ENST00000395925 NEFLP07196 543 aa18.7■□□□□ 0.58
GLI3-201ENST00000395925 PCGF6Q9BYE7 350 aa18.69■□□□□ 0.58
GLI3-201ENST00000395925 RANGAP1P46060 587 aaPredicted RBP18.61■□□□□ 0.57
GLI3-201ENST00000395925 ATP1B4Q9UN42 357 aaPredicted RBP18.56■□□□□ 0.56
GLI3-201ENST00000395925 ZEB1P37275 1124 aaPredicted RBP18.23■□□□□ 0.51
GLI3-201ENST00000395925 ZNF316A6NFI3 1004 aaPredicted RBP18.14■□□□□ 0.49
GLI3-201ENST00000395925 UBTFP17480 764 aaKnown RBP18.08■□□□□ 0.48
GLI3-201ENST00000395925 POLR3GLQ9BT43 218 aa18.03■□□□□ 0.48
GLI3-201ENST00000395925 RTL5Q5HYW3 569 aaPredicted RBP18.01■□□□□ 0.47
GLI3-201ENST00000395925 MYT1LQ9UL68 1186 aa17.99■□□□□ 0.47
GLI3-201ENST00000395925 TRIM41Q8WV44 630 aa17.99■□□□□ 0.47
GLI3-201ENST00000395925 CLSPNQ9HAW4 1339 aa17.96■□□□□ 0.47
GLI3-201ENST00000395925 CNGB1Q14028 1251 aaPredicted RBP17.93■□□□□ 0.46
GLI3-201ENST00000395925 NISCHQ9Y2I1 1504 aa17.9■□□□□ 0.46
GLI3-201ENST00000395925 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
GLI3-201ENST00000395925 SLC4A1APQ9BWU0 796 aaKnown RBP17.88■□□□□ 0.45
GLI3-201ENST00000395925 CHIC1Q5VXU3 224 aa17.86■□□□□ 0.45
GLI3-201ENST00000395925 ITGAEP38570 1179 aa17.76■□□□□ 0.43
GLI3-201ENST00000395925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
GLI3-201ENST00000395925 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
GLI3-201ENST00000395925 ZBTB47Q9UFB7 747 aaPredicted RBP17.68■□□□□ 0.42
GLI3-201ENST00000395925 SLC24A1O60721 1099 aa17.52■□□□□ 0.39
GLI3-201ENST00000395925 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
GLI3-201ENST00000395925 HRCP23327 699 aa17.42■□□□□ 0.38
GLI3-201ENST00000395925 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
GLI3-201ENST00000395925 ANP32BQ92688 251 aaKnown RBP17.37■□□□□ 0.37
GLI3-201ENST00000395925 GLIPR1L2Q4G1C9 344 aa17.33■□□□□ 0.36
GLI3-201ENST00000395925 CDK11BP21127 795 aaKnown RBP17.26■□□□□ 0.35
GLI3-201ENST00000395925 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
GLI3-201ENST00000395925 EIF5BO60841 1220 aaKnown RBP17.24■□□□□ 0.35
GLI3-201ENST00000395925 CANXP27824 592 aaKnown RBP17.23■□□□□ 0.35
GLI3-201ENST00000395925 BCANQ96GW7 911 aa17.22■□□□□ 0.35
GLI3-201ENST00000395925 DIEXFQ68CQ4 756 aaKnown RBP17.19■□□□□ 0.34
GLI3-201ENST00000395925 NEFMP07197 916 aa17.18■□□□□ 0.34
GLI3-201ENST00000395925 FAM50AQ14320 339 aaKnown RBP17.13■□□□□ 0.33
GLI3-201ENST00000395925 HSP90AA1P07900 732 aaKnown RBP17.13■□□□□ 0.33
GLI3-201ENST00000395925 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
GLI3-201ENST00000395925 NEUROD1Q13562 356 aa17.1■□□□□ 0.33
GLI3-201ENST00000395925 ZNF326Q5BKZ1 582 aaKnown RBP17.08■□□□□ 0.32
GLI3-201ENST00000395925 LOC105371045A0A1W2PR82 267 aa17.08■□□□□ 0.32
GLI3-201ENST00000395925 ANP32AP39687 249 aaKnown RBP17.02■□□□□ 0.32
GLI3-201ENST00000395925 ANP32CO43423 234 aa16.98■□□□□ 0.31
GLI3-201ENST00000395925 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
GLI3-201ENST00000395925 GTF3C3Q9Y5Q9 886 aa16.92■□□□□ 0.3
GLI3-201ENST00000395925 UPF2Q9HAU5 1272 aaKnown RBP16.89■□□□□ 0.29
GLI3-201ENST00000395925 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
GLI3-201ENST00000395925 FBLN2P98095 1184 aa16.71■□□□□ 0.27
GLI3-201ENST00000395925 ARXQ96QS3 562 aa16.71■□□□□ 0.27
GLI3-201ENST00000395925 TULP1O00294 542 aaPredicted RBP16.68■□□□□ 0.26
GLI3-201ENST00000395925 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
GLI3-201ENST00000395925 NCBP3Q53F19 620 aaKnown RBP16.61■□□□□ 0.25
GLI3-201ENST00000395925 ARID3CA6NKF2 412 aa16.58■□□□□ 0.24
GLI3-201ENST00000395925 NBR1Q14596 966 aa16.58■□□□□ 0.24
GLI3-201ENST00000395925 TRIM44Q96DX7 344 aaPredicted RBP16.58■□□□□ 0.24
GLI3-201ENST00000395925 ESF1Q9H501 851 aaKnown RBP16.57■□□□□ 0.24
GLI3-201ENST00000395925 A0A0G2JS52 829 aa16.57■□□□□ 0.24
GLI3-201ENST00000395925 ZRSR1Q15695 479 aaKnown RBP16.57■□□□□ 0.24
GLI3-201ENST00000395925 SALL2Q9Y467 1007 aaPredicted RBP16.55■□□□□ 0.24
GLI3-201ENST00000395925 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
GLI3-201ENST00000395925 NCLP19338 710 aaKnown RBP16.52■□□□□ 0.24
GLI3-201ENST00000395925 FKBP8Q14318 412 aa16.51■□□□□ 0.23
GLI3-201ENST00000395925 ZNF777Q9ULD5 760 aaPredicted RBP16.51■□□□□ 0.23
GLI3-201ENST00000395925 CHGAP10645 457 aaKnown RBP16.5■□□□□ 0.23
GLI3-201ENST00000395925 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
GLI3-201ENST00000395925 DNTTIP2Q5QJE6 756 aaKnown RBP16.47■□□□□ 0.23
GLI3-201ENST00000395925 MYH16Q9H6N6 1097 aa16.46■□□□□ 0.23
GLI3-201ENST00000395925 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.45■□□□□ 0.22
GLI3-201ENST00000395925 P3H3Q8IVL6 736 aa16.44■□□□□ 0.22
GLI3-201ENST00000395925 FAM9BQ8IZU0 186 aa16.43■□□□□ 0.22
GLI3-201ENST00000395925 HNRNPUQ00839 825 aaKnown RBP eCLIP16.41■□□□□ 0.22
GLI3-201ENST00000395925 PTMAP06454 111 aaKnown RBP16.4■□□□□ 0.22
GLI3-201ENST00000395925 ACIN1Q9UKV3 1341 aaKnown RBP16.4■□□□□ 0.22
GLI3-201ENST00000395925 CCDC136Q96JN2 1154 aa16.37■□□□□ 0.21
GLI3-201ENST00000395925 GOLGA6L22H0YM25 854 aa16.36■□□□□ 0.21
GLI3-201ENST00000395925 ANP32EQ9BTT0 268 aa16.35■□□□□ 0.21
GLI3-201ENST00000395925 PLEKHG5O94827 1062 aa16.34■□□□□ 0.21
GLI3-201ENST00000395925 PRM3Q9NNZ6 103 aa16.34■□□□□ 0.21
GLI3-201ENST00000395925 GOLGA6L6A8MZA4 724 aa16.32■□□□□ 0.2
GLI3-201ENST00000395925 CLSTN1O94985 981 aa16.32■□□□□ 0.2
GLI3-201ENST00000395925 TMC1Q8TDI8 760 aa16.32■□□□□ 0.2
GLI3-201ENST00000395925 BECN1Q14457 450 aa16.29■□□□□ 0.2
GLI3-201ENST00000395925 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
GLI3-201ENST00000395925 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
GLI3-201ENST00000395925 ZBTB7CA1YPR0 619 aa16.28■□□□□ 0.2
GLI3-201ENST00000395925 TPRNQ4KMQ1 711 aa16.28■□□□□ 0.2
GLI3-201ENST00000395925 TONSLQ96HA7 1378 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms