Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 AL627223.1-201ENST00000416693 442 ntBASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 RN7SL828P-201ENST00000607615 303 ntBASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 AL513210.1-201ENST00000629608 234 ntBASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 BEND3P3-201ENST00000611030 2440 ntBASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C12orf4Q9NQ89 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 AL133267.1-201ENST00000398220 340 ntBASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 MTND6P24-201ENST00000440466 518 ntBASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 SERBP1P3-201ENST00000459980 809 ntBASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 PGAM5P1-201ENST00000518923 814 ntBASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 AL133215.2-201ENST00000609242 977 ntBASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 MIR6069-201ENST00000620069 79 ntBASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 CSPG4P11-201ENST00000560634 4910 ntBASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C12orf4Q9NQ89 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13□□□□□ -0.33
C12orf4Q9NQ89 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13□□□□□ -0.33
C12orf4Q9NQ89 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C12orf4Q9NQ89 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C12orf4Q9NQ89 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13□□□□□ -0.33
C12orf4Q9NQ89 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms