RNA–Protein interactions for RNA: ENST00000318887.7

C3orf38-201, Transcript of chromosome 3 open reading frame 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf38, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf38-201ENST00000318887 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
C3orf38-201ENST00000318887 CCDC180Q9P1Z9 1646 aa22.27■■□□□ 1.16
C3orf38-201ENST00000318887 PELP1Q8IZL8 1130 aaKnown RBP22.08■■□□□ 1.12
C3orf38-201ENST00000318887 HRCP23327 699 aa21.97■■□□□ 1.11
C3orf38-201ENST00000318887 ABCC9O60706 1549 aa21.8■■□□□ 1.08
C3orf38-201ENST00000318887 DCAF8L2P0C7V8 631 aa21.56■■□□□ 1.04
C3orf38-201ENST00000318887 MYT1Q01538 1121 aa21.44■■□□□ 1.02
C3orf38-201ENST00000318887 ZCCHC6Q5VYS8 1495 aaKnown RBP21.27■■□□□ 1
C3orf38-201ENST00000318887 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
C3orf38-201ENST00000318887 PCGF6Q9BYE7 350 aa21.17■□□□□ 0.98
C3orf38-201ENST00000318887 SCAF1Q9H7N4 1312 aaKnown RBP20.93■□□□□ 0.94
C3orf38-201ENST00000318887 NACADO15069 1562 aa20.89■□□□□ 0.93
C3orf38-201ENST00000318887 DCAF1Q9Y4B6 1507 aa20.87■□□□□ 0.93
C3orf38-201ENST00000318887 RB1CC1Q8TDY2 1594 aa20.87■□□□□ 0.93
C3orf38-201ENST00000318887 MYO15BQ96JP2 1530 aa20.84■□□□□ 0.93
C3orf38-201ENST00000318887 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
C3orf38-201ENST00000318887 SUPT5HO00267 1087 aaKnown RBP20.7■□□□□ 0.9
C3orf38-201ENST00000318887 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
C3orf38-201ENST00000318887 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
C3orf38-201ENST00000318887 ZEB1P37275 1124 aaPredicted RBP20.64■□□□□ 0.9
C3orf38-201ENST00000318887 PABPN1Q86U42 306 aaKnown RBP eCLIP20.57■□□□□ 0.88
C3orf38-201ENST00000318887 TRIM26Q12899 539 aaPredicted RBP20.53■□□□□ 0.88
C3orf38-201ENST00000318887 UNC13AQ9UPW8 1703 aa20.5■□□□□ 0.87
C3orf38-201ENST00000318887 ACIN1Q9UKV3 1341 aaKnown RBP20.38■□□□□ 0.85
C3orf38-201ENST00000318887 BICRAQ9NZM4 1560 aa20.32■□□□□ 0.84
C3orf38-201ENST00000318887 TTBK1Q5TCY1 1321 aaPredicted RBP20.28■□□□□ 0.84
C3orf38-201ENST00000318887 NEUROD1Q13562 356 aa20.21■□□□□ 0.83
C3orf38-201ENST00000318887 GTF3C3Q9Y5Q9 886 aa20.16■□□□□ 0.82
C3orf38-201ENST00000318887 CENPBP07199 599 aaPredicted RBP20.14■□□□□ 0.82
C3orf38-201ENST00000318887 LOC105371045A0A1W2PR82 267 aa20.08■□□□□ 0.8
C3orf38-201ENST00000318887 CECR2Q9BXF3 1484 aa19.97■□□□□ 0.79
C3orf38-201ENST00000318887 DIEXFQ68CQ4 756 aaKnown RBP19.77■□□□□ 0.76
C3orf38-201ENST00000318887 EIF4G1Q04637 1599 aaKnown RBP19.75■□□□□ 0.75
C3orf38-201ENST00000318887 MROH2BQ7Z745 1585 aa19.75■□□□□ 0.75
C3orf38-201ENST00000318887 DNAJC5BQ9UF47 199 aa19.73■□□□□ 0.75
C3orf38-201ENST00000318887 BCL11AQ9H165 835 aa19.7■□□□□ 0.74
C3orf38-201ENST00000318887 SMARCA4P51532 1647 aa19.67■□□□□ 0.74
C3orf38-201ENST00000318887 BAZ1AQ9NRL2 1556 aaPredicted RBP19.66■□□□□ 0.74
C3orf38-201ENST00000318887 RSF1Q96T23 1441 aaPredicted RBP19.64■□□□□ 0.74
C3orf38-201ENST00000318887 CC2D2AQ9P2K1 1620 aa19.6■□□□□ 0.73
C3orf38-201ENST00000318887 WIZO95785 1651 aa19.58■□□□□ 0.72
C3orf38-201ENST00000318887 CCER1Q8TC90 406 aaPredicted RBP19.52■□□□□ 0.71
C3orf38-201ENST00000318887 ATAD2BQ9ULI0 1458 aa19.49■□□□□ 0.71
C3orf38-201ENST00000318887 ANP32EQ9BTT0 268 aa19.49■□□□□ 0.71
C3orf38-201ENST00000318887 FAM9AQ8IZU1 332 aaPredicted RBP19.48■□□□□ 0.71
C3orf38-201ENST00000318887 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
C3orf38-201ENST00000318887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.44■□□□□ 0.7
C3orf38-201ENST00000318887 SMARCA2P51531 1590 aa19.38■□□□□ 0.69
C3orf38-201ENST00000318887 BAZ1BQ9UIG0 1483 aaKnown RBP19.37■□□□□ 0.69
C3orf38-201ENST00000318887 YTHDC1Q96MU7 727 aaKnown RBP19.36■□□□□ 0.69
C3orf38-201ENST00000318887 CLSPNQ9HAW4 1339 aa19.35■□□□□ 0.69
C3orf38-201ENST00000318887 PEG3Q9GZU2 1588 aa19.33■□□□□ 0.69
C3orf38-201ENST00000318887 NCAPD3P42695 1498 aa19.33■□□□□ 0.68
C3orf38-201ENST00000318887 ZNF316A6NFI3 1004 aaPredicted RBP19.32■□□□□ 0.68
C3orf38-201ENST00000318887 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
C3orf38-201ENST00000318887 HMGXB3Q12766 1538 aa19.22■□□□□ 0.67
C3orf38-201ENST00000318887 PRKCSHP14314 528 aaPredicted RBP19.21■□□□□ 0.66
C3orf38-201ENST00000318887 CSRNP3Q8WYN3 585 aa19.19■□□□□ 0.66
C3orf38-201ENST00000318887 TSHZ2Q9NRE2 1034 aa19.16■□□□□ 0.66
C3orf38-201ENST00000318887 MIER1Q8N108 512 aa19.15■□□□□ 0.66
C3orf38-201ENST00000318887 CCDC88BA6NC98 1476 aa19.13■□□□□ 0.65
C3orf38-201ENST00000318887 SUPT16HQ9Y5B9 1047 aaKnown RBP19.13■□□□□ 0.65
C3orf38-201ENST00000318887 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
C3orf38-201ENST00000318887 NESP48681 1621 aa19.01■□□□□ 0.63
C3orf38-201ENST00000318887 EHMT2Q96KQ7 1210 aa18.9■□□□□ 0.62
C3orf38-201ENST00000318887 CADPSQ9ULU8 1353 aa18.87■□□□□ 0.61
C3orf38-201ENST00000318887 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.6
C3orf38-201ENST00000318887 CFTRP13569 1480 aa18.81■□□□□ 0.6
C3orf38-201ENST00000318887 LAMC3Q9Y6N6 1575 aa18.73■□□□□ 0.59
C3orf38-201ENST00000318887 APLP2Q06481 763 aa18.71■□□□□ 0.59
C3orf38-201ENST00000318887 FANCD2Q9BXW9 1451 aa18.69■□□□□ 0.58
C3orf38-201ENST00000318887 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
C3orf38-201ENST00000318887 ABCC8Q09428 1581 aa18.68■□□□□ 0.58
C3orf38-201ENST00000318887 RBM19Q9Y4C8 960 aaKnown RBP18.67■□□□□ 0.58
C3orf38-201ENST00000318887 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
C3orf38-201ENST00000318887 PDS5BQ9NTI5 1447 aa18.65■□□□□ 0.58
C3orf38-201ENST00000318887 MYT1LQ9UL68 1186 aa18.64■□□□□ 0.57
C3orf38-201ENST00000318887 CEP164Q9UPV0 1460 aa18.6■□□□□ 0.57
C3orf38-201ENST00000318887 PRDM2Q13029 1718 aa18.58■□□□□ 0.56
C3orf38-201ENST00000318887 CEP162Q5TB80 1403 aa18.53■□□□□ 0.56
C3orf38-201ENST00000318887 BCANQ96GW7 911 aa18.52■□□□□ 0.56
C3orf38-201ENST00000318887 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
C3orf38-201ENST00000318887 MSH5O43196 834 aa18.49■□□□□ 0.55
C3orf38-201ENST00000318887 FKBP8Q14318 412 aa18.49■□□□□ 0.55
C3orf38-201ENST00000318887 CUX1P39880 1505 aa18.47■□□□□ 0.55
C3orf38-201ENST00000318887 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
C3orf38-201ENST00000318887 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
C3orf38-201ENST00000318887 MRC2Q9UBG0 1479 aa18.45■□□□□ 0.54
C3orf38-201ENST00000318887 NEFLP07196 543 aa18.44■□□□□ 0.54
C3orf38-201ENST00000318887 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
C3orf38-201ENST00000318887 TOPBP1Q92547 1522 aa18.42■□□□□ 0.54
C3orf38-201ENST00000318887 THOC2Q8NI27 1593 aaKnown RBP18.41■□□□□ 0.54
C3orf38-201ENST00000318887 HNRNPUL2Q1KMD3 747 aaKnown RBP18.4■□□□□ 0.54
C3orf38-201ENST00000318887 DEKP35659 375 aaKnown RBP18.36■□□□□ 0.53
C3orf38-201ENST00000318887 DNMBPQ6XZF7 1577 aa18.36■□□□□ 0.53
C3orf38-201ENST00000318887 FGD5Q6ZNL6 1462 aa18.35■□□□□ 0.53
C3orf38-201ENST00000318887 RAD54L2Q9Y4B4 1467 aa18.35■□□□□ 0.53
C3orf38-201ENST00000318887 ANO8Q9HCE9 1232 aaPredicted RBP18.35■□□□□ 0.53
C3orf38-201ENST00000318887 ERICH6BQ5W0A0 696 aa18.34■□□□□ 0.53
C3orf38-201ENST00000318887 WDR62O43379 1518 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms