RNA–Protein interactions for RNA: ENST00000378202.5

RPP38-203, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPP38, Length 1,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-203ENST00000378202 NISCHQ9Y2I1 1504 aa43.89■■■■■ 4.62
RPP38-203ENST00000378202 ABCC9O60706 1549 aa39.87■■■■□ 3.97
RPP38-203ENST00000378202 CCDC180Q9P1Z9 1646 aa39.43■■■■□ 3.9
RPP38-203ENST00000378202 DNAJC5BQ9UF47 199 aa37.81■■■■□ 3.64
RPP38-203ENST00000378202 RB1CC1Q8TDY2 1594 aa37.79■■■■□ 3.64
RPP38-203ENST00000378202 NACADO15069 1562 aa37.46■■■■□ 3.59
RPP38-203ENST00000378202 DCAF8L2P0C7V8 631 aa37.29■■■■□ 3.56
RPP38-203ENST00000378202 PABPN1Q86U42 306 aaKnown RBP eCLIP37.14■■■■□ 3.54
RPP38-203ENST00000378202 MYO15BQ96JP2 1530 aa36.87■■■■□ 3.49
RPP38-203ENST00000378202 UNC13AQ9UPW8 1703 aa36.75■■■■□ 3.47
RPP38-203ENST00000378202 BICRAQ9NZM4 1560 aa36.67■■■■□ 3.46
RPP38-203ENST00000378202 ZCCHC6Q5VYS8 1495 aaKnown RBP36.27■■■■□ 3.4
RPP38-203ENST00000378202 DCAF1Q9Y4B6 1507 aa36.25■■■■□ 3.39
RPP38-203ENST00000378202 SHROOM4Q9ULL8 1493 aa36.22■■■■□ 3.39
RPP38-203ENST00000378202 CECR2Q9BXF3 1484 aa35.99■■■■□ 3.35
RPP38-203ENST00000378202 CC2D2AQ9P2K1 1620 aa35.96■■■■□ 3.35
RPP38-203ENST00000378202 SCRIBQ14160 1630 aa35.91■■■■□ 3.34
RPP38-203ENST00000378202 EIF4G1Q04637 1599 aaKnown RBP35.81■■■■□ 3.32
RPP38-203ENST00000378202 DNAJC5Q9H3Z4 198 aa35.03■■■■□ 3.2
RPP38-203ENST00000378202 NCAPD3P42695 1498 aa34.65■■■■□ 3.14
RPP38-203ENST00000378202 CUX2O14529 1486 aa34.55■■■■□ 3.12
RPP38-203ENST00000378202 ERCC6Q03468 1493 aa34.48■■■■□ 3.11
RPP38-203ENST00000378202 ATAD2BQ9ULI0 1458 aa34.46■■■■□ 3.11
RPP38-203ENST00000378202 SMARCA2P51531 1590 aa34.32■■■■□ 3.09
RPP38-203ENST00000378202 HMGXB3Q12766 1538 aa34.28■■■■□ 3.08
RPP38-203ENST00000378202 SMARCA4P51532 1647 aa34.25■■■■□ 3.07
RPP38-203ENST00000378202 NESP48681 1621 aa34.14■■■■□ 3.06
RPP38-203ENST00000378202 BAZ1BQ9UIG0 1483 aaKnown RBP34.09■■■■□ 3.05
RPP38-203ENST00000378202 BAZ1AQ9NRL2 1556 aaPredicted RBP34.08■■■■□ 3.05
RPP38-203ENST00000378202 PEG3Q9GZU2 1588 aa33.96■■■■□ 3.03
RPP38-203ENST00000378202 LAMC3Q9Y6N6 1575 aa33.85■■■■□ 3.01
RPP38-203ENST00000378202 THOC2Q8NI27 1593 aaKnown RBP33.8■■■■□ 3
RPP38-203ENST00000378202 MROH2BQ7Z745 1585 aa33.79■■■■□ 3
RPP38-203ENST00000378202 PDS5BQ9NTI5 1447 aa33.76■■■□□ 2.99
RPP38-203ENST00000378202 CADPSQ9ULU8 1353 aa33.6■■■□□ 2.97
RPP38-203ENST00000378202 KIF21AQ7Z4S6 1674 aa33.57■■■□□ 2.96
RPP38-203ENST00000378202 AEBP2Q6ZN18 517 aaPredicted RBP33.43■■■□□ 2.94
RPP38-203ENST00000378202 MRC2Q9UBG0 1479 aa33.43■■■□□ 2.94
RPP38-203ENST00000378202 WDR62O43379 1518 aa33.33■■■□□ 2.93
RPP38-203ENST00000378202 WIZO95785 1651 aa33.29■■■□□ 2.92
RPP38-203ENST00000378202 TRIM41Q8WV44 630 aa33.29■■■□□ 2.92
RPP38-203ENST00000378202 CEP164Q9UPV0 1460 aa33.21■■■□□ 2.91
RPP38-203ENST00000378202 FANCD2Q9BXW9 1451 aa33.16■■■□□ 2.9
RPP38-203ENST00000378202 CFTRP13569 1480 aa33.11■■■□□ 2.89
RPP38-203ENST00000378202 RSF1Q96T23 1441 aaPredicted RBP33.02■■■□□ 2.88
RPP38-203ENST00000378202 OSCARQ8IYS5 282 aa33.01■■■□□ 2.87
RPP38-203ENST00000378202 TOP2AP11388 1531 aaKnown RBP32.91■■■□□ 2.86
RPP38-203ENST00000378202 URB2Q14146 1524 aaKnown RBP32.88■■■□□ 2.85
RPP38-203ENST00000378202 CCDC88BA6NC98 1476 aa32.59■■■□□ 2.81
RPP38-203ENST00000378202 IFT140Q96RY7 1462 aa32.59■■■□□ 2.81
RPP38-203ENST00000378202 ZNF608Q9ULD9 1512 aaPredicted RBP32.54■■■□□ 2.8
RPP38-203ENST00000378202 PRDM2Q13029 1718 aa32.51■■■□□ 2.8
RPP38-203ENST00000378202 TOPBP1Q92547 1522 aa32.47■■■□□ 2.79
RPP38-203ENST00000378202 ABCC8Q09428 1581 aa32.44■■■□□ 2.78
RPP38-203ENST00000378202 RIMBP3CA6NJZ7 1639 aa32.43■■■□□ 2.78
RPP38-203ENST00000378202 RIMBP3BA6NNM3 1639 aa32.43■■■□□ 2.78
RPP38-203ENST00000378202 RIMBP3Q9UFD9 1639 aa32.43■■■□□ 2.78
RPP38-203ENST00000378202 ARHGEF11O15085 1522 aa32.35■■■□□ 2.77
RPP38-203ENST00000378202 DNMBPQ6XZF7 1577 aa32.29■■■□□ 2.76
RPP38-203ENST00000378202 EIF4G3O43432 1585 aaKnown RBP32.27■■■□□ 2.76
RPP38-203ENST00000378202 AQRO60306 1485 aaKnown RBP eCLIP32.24■■■□□ 2.75
RPP38-203ENST00000378202 CYB5RLQ6IPT4 315 aa32.23■■■□□ 2.75
RPP38-203ENST00000378202 TARBP1Q13395 1621 aaKnown RBP32.17■■■□□ 2.74
RPP38-203ENST00000378202 FBLN2P98095 1184 aa32.14■■■□□ 2.74
RPP38-203ENST00000378202 POLA1P09884 1462 aaPredicted RBP32.12■■■□□ 2.73
RPP38-203ENST00000378202 CHD1O14646 1710 aa32.03■■■□□ 2.72
RPP38-203ENST00000378202 SOGA1O94964 1423 aa32.02■■■□□ 2.72
RPP38-203ENST00000378202 TDRD9Q8NDG6 1382 aaKnown RBP32.01■■■□□ 2.71
RPP38-203ENST00000378202 RAD54L2Q9Y4B4 1467 aa32.01■■■□□ 2.71
RPP38-203ENST00000378202 ARAP1Q96P48 1450 aa32■■■□□ 2.71
RPP38-203ENST00000378202 TRHP20396 242 aaPredicted RBP31.99■■■□□ 2.71
RPP38-203ENST00000378202 CHIC1Q5VXU3 224 aa31.99■■■□□ 2.71
RPP38-203ENST00000378202 CHMP7Q8WUX9 453 aaPredicted RBP31.87■■■□□ 2.69
RPP38-203ENST00000378202 SNAPC4Q5SXM2 1469 aa31.85■■■□□ 2.69
RPP38-203ENST00000378202 FGD5Q6ZNL6 1462 aa31.85■■■□□ 2.69
RPP38-203ENST00000378202 WDR97A6NE52 1622 aa31.84■■■□□ 2.69
RPP38-203ENST00000378202 MAGI1Q96QZ7 1491 aaPredicted RBP31.79■■■□□ 2.68
RPP38-203ENST00000378202 GRIN2BQ13224 1484 aa31.77■■■□□ 2.68
RPP38-203ENST00000378202 CUX1P39880 1505 aa31.76■■■□□ 2.68
RPP38-203ENST00000378202 CLASP1Q7Z460 1538 aa31.76■■■□□ 2.68
RPP38-203ENST00000378202 SYNJ1O43426 1573 aa31.73■■■□□ 2.67
RPP38-203ENST00000378202 SYNJ2O15056 1496 aa31.69■■■□□ 2.66
RPP38-203ENST00000378202 GAPVD1Q14C86 1478 aa31.6■■■□□ 2.65
RPP38-203ENST00000378202 ABCA10Q8WWZ4 1543 aa31.5■■■□□ 2.63
RPP38-203ENST00000378202 PBRM1Q86U86 1689 aa31.44■■■□□ 2.62
RPP38-203ENST00000378202 ABCA5Q8WWZ7 1642 aa31.4■■■□□ 2.62
RPP38-203ENST00000378202 WRNQ14191 1432 aaPredicted RBP eCLIP31.36■■■□□ 2.61
RPP38-203ENST00000378202 GRIN2AQ12879 1464 aa31.33■■■□□ 2.61
RPP38-203ENST00000378202 SUPT5HO00267 1087 aaKnown RBP31.31■■■□□ 2.6
RPP38-203ENST00000378202 NUP160Q12769 1436 aa31.26■■■□□ 2.6
RPP38-203ENST00000378202 ERCC6L2Q5T890 1561 aa31.22■■■□□ 2.59
RPP38-203ENST00000378202 FHAD1B1AJZ9 1412 aa31.21■■■□□ 2.59
RPP38-203ENST00000378202 ADAMTS12P58397 1594 aa31.2■■■□□ 2.58
RPP38-203ENST00000378202 CEP170Q5SW79 1584 aa31.18■■■□□ 2.58
RPP38-203ENST00000378202 TOP2BQ02880 1626 aa31.14■■■□□ 2.58
RPP38-203ENST00000378202 BIVM-ERCC5R4GMW8 1640 aa31.09■■■□□ 2.57
RPP38-203ENST00000378202 SHROOM2Q13796 1616 aa31.09■■■□□ 2.57
RPP38-203ENST00000378202 ERICH3Q5RHP9 1530 aa31.08■■■□□ 2.57
RPP38-203ENST00000378202 PRG4Q92954 1404 aaPredicted RBP31.01■■■□□ 2.55
RPP38-203ENST00000378202 JPH4Q96JJ6 628 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms