RNA–Protein interactions for RNA: ENST00000611030.1

BEND3P3-201, Transcript of BEN domain containing 3 pseudogene 3, humanhuman

BASIC

Gene BEND3P3, Length 2,440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3P3-201ENST00000611030 NISCHQ9Y2I1 1504 aa29.97■■■□□ 2.39
BEND3P3-201ENST00000611030 CCDC180Q9P1Z9 1646 aa25.79■■□□□ 1.72
BEND3P3-201ENST00000611030 ZCCHC6Q5VYS8 1495 aaKnown RBP25.24■■□□□ 1.63
BEND3P3-201ENST00000611030 SHROOM4Q9ULL8 1493 aa25■■□□□ 1.59
BEND3P3-201ENST00000611030 DCAF8L2P0C7V8 631 aa24.82■■□□□ 1.56
BEND3P3-201ENST00000611030 DCAF1Q9Y4B6 1507 aa24.63■■□□□ 1.53
BEND3P3-201ENST00000611030 ABCC9O60706 1549 aa24.29■■□□□ 1.48
BEND3P3-201ENST00000611030 SUPT5HO00267 1087 aaKnown RBP24.21■■□□□ 1.47
BEND3P3-201ENST00000611030 MYO15BQ96JP2 1530 aa24.13■■□□□ 1.45
BEND3P3-201ENST00000611030 SCRIBQ14160 1630 aa24.01■■□□□ 1.43
BEND3P3-201ENST00000611030 NACADO15069 1562 aa23.94■■□□□ 1.42
BEND3P3-201ENST00000611030 RB1CC1Q8TDY2 1594 aa23.66■■□□□ 1.38
BEND3P3-201ENST00000611030 RSF1Q96T23 1441 aaPredicted RBP23.47■■□□□ 1.35
BEND3P3-201ENST00000611030 CECR2Q9BXF3 1484 aa23.41■■□□□ 1.34
BEND3P3-201ENST00000611030 UNC13AQ9UPW8 1703 aa23.41■■□□□ 1.34
BEND3P3-201ENST00000611030 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
BEND3P3-201ENST00000611030 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
BEND3P3-201ENST00000611030 HRCP23327 699 aa23.24■■□□□ 1.31
BEND3P3-201ENST00000611030 WIZO95785 1651 aa23.12■■□□□ 1.29
BEND3P3-201ENST00000611030 BICRAQ9NZM4 1560 aa23.12■■□□□ 1.29
BEND3P3-201ENST00000611030 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.29
BEND3P3-201ENST00000611030 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
BEND3P3-201ENST00000611030 SMARCA4P51532 1647 aa22.95■■□□□ 1.26
BEND3P3-201ENST00000611030 PCGF6Q9BYE7 350 aa22.74■■□□□ 1.23
BEND3P3-201ENST00000611030 TOP2AP11388 1531 aaKnown RBP22.73■■□□□ 1.23
BEND3P3-201ENST00000611030 CCDC88BA6NC98 1476 aa22.62■■□□□ 1.21
BEND3P3-201ENST00000611030 SMARCA2P51531 1590 aa22.61■■□□□ 1.21
BEND3P3-201ENST00000611030 EIF4G1Q04637 1599 aaKnown RBP22.61■■□□□ 1.21
BEND3P3-201ENST00000611030 LOC105371045A0A1W2PR82 267 aa22.6■■□□□ 1.21
BEND3P3-201ENST00000611030 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
BEND3P3-201ENST00000611030 PEG3Q9GZU2 1588 aa22.58■■□□□ 1.2
BEND3P3-201ENST00000611030 PPARGC1BQ86YN6 1023 aaKnown RBP22.55■■□□□ 1.2
BEND3P3-201ENST00000611030 ATAD2BQ9ULI0 1458 aa22.49■■□□□ 1.19
BEND3P3-201ENST00000611030 FAM9AQ8IZU1 332 aaPredicted RBP22.37■■□□□ 1.17
BEND3P3-201ENST00000611030 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
BEND3P3-201ENST00000611030 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
BEND3P3-201ENST00000611030 TRIM26Q12899 539 aaPredicted RBP22.27■■□□□ 1.16
BEND3P3-201ENST00000611030 EHMT2Q96KQ7 1210 aa22.17■■□□□ 1.14
BEND3P3-201ENST00000611030 NCAPD3P42695 1498 aa22.16■■□□□ 1.14
BEND3P3-201ENST00000611030 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
BEND3P3-201ENST00000611030 PELP1Q8IZL8 1130 aaKnown RBP22.08■■□□□ 1.12
BEND3P3-201ENST00000611030 ZEB1P37275 1124 aaPredicted RBP22.07■■□□□ 1.12
BEND3P3-201ENST00000611030 SOGA1O94964 1423 aa22.03■■□□□ 1.12
BEND3P3-201ENST00000611030 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
BEND3P3-201ENST00000611030 SYNJ1O43426 1573 aa22■■□□□ 1.11
BEND3P3-201ENST00000611030 RUSC2Q8N2Y8 1516 aa21.98■■□□□ 1.11
BEND3P3-201ENST00000611030 CC2D2AQ9P2K1 1620 aa21.93■■□□□ 1.1
BEND3P3-201ENST00000611030 CFTRP13569 1480 aa21.82■■□□□ 1.08
BEND3P3-201ENST00000611030 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
BEND3P3-201ENST00000611030 TOP2BQ02880 1626 aa21.77■■□□□ 1.08
BEND3P3-201ENST00000611030 EEA1Q15075 1411 aa21.76■■□□□ 1.07
BEND3P3-201ENST00000611030 SCAF1Q9H7N4 1312 aaKnown RBP21.73■■□□□ 1.07
BEND3P3-201ENST00000611030 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
BEND3P3-201ENST00000611030 CUX1P39880 1505 aa21.71■■□□□ 1.07
BEND3P3-201ENST00000611030 PRDM2Q13029 1718 aa21.67■■□□□ 1.06
BEND3P3-201ENST00000611030 CADPSQ9ULU8 1353 aa21.66■■□□□ 1.06
BEND3P3-201ENST00000611030 TNIKQ9UKE5 1360 aa21.63■■□□□ 1.05
BEND3P3-201ENST00000611030 CEP162Q5TB80 1403 aa21.61■■□□□ 1.05
BEND3P3-201ENST00000611030 GOLGA3Q08378 1498 aa21.59■■□□□ 1.05
BEND3P3-201ENST00000611030 UBTFP17480 764 aaKnown RBP21.59■■□□□ 1.05
BEND3P3-201ENST00000611030 DNAJC5BQ9UF47 199 aa21.57■■□□□ 1.04
BEND3P3-201ENST00000611030 KIF21BO75037 1637 aa21.56■■□□□ 1.04
BEND3P3-201ENST00000611030 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
BEND3P3-201ENST00000611030 RAPGEF2Q9Y4G8 1499 aa21.52■■□□□ 1.03
BEND3P3-201ENST00000611030 NESP48681 1621 aa21.51■■□□□ 1.03
BEND3P3-201ENST00000611030 FANCD2Q9BXW9 1451 aa21.44■■□□□ 1.02
BEND3P3-201ENST00000611030 PRXQ9BXM0 1461 aa21.4■■□□□ 1.02
BEND3P3-201ENST00000611030 KIF27Q86VH2 1401 aa21.37■■□□□ 1.01
BEND3P3-201ENST00000611030 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
BEND3P3-201ENST00000611030 ACIN1Q9UKV3 1341 aaKnown RBP21.36■■□□□ 1.01
BEND3P3-201ENST00000611030 CUX2O14529 1486 aa21.31■■□□□ 1
BEND3P3-201ENST00000611030 CLIP1P30622 1438 aa21.31■■□□□ 1
BEND3P3-201ENST00000611030 ERICH3Q5RHP9 1530 aa21.31■■□□□ 1
BEND3P3-201ENST00000611030 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
BEND3P3-201ENST00000611030 RANGAP1P46060 587 aaPredicted RBP21.29■■□□□ 1
BEND3P3-201ENST00000611030 TTBK1Q5TCY1 1321 aaPredicted RBP21.29■■□□□ 1
BEND3P3-201ENST00000611030 TOPBP1Q92547 1522 aa21.27■■□□□ 1
BEND3P3-201ENST00000611030 DNMBPQ6XZF7 1577 aa21.26■□□□□ 0.99
BEND3P3-201ENST00000611030 IGF1RP08069 1367 aa21.26■□□□□ 0.99
BEND3P3-201ENST00000611030 RAD54L2Q9Y4B4 1467 aa21.24■□□□□ 0.99
BEND3P3-201ENST00000611030 NEUROD1Q13562 356 aa21.24■□□□□ 0.99
BEND3P3-201ENST00000611030 POLA1P09884 1462 aaPredicted RBP21.22■□□□□ 0.99
BEND3P3-201ENST00000611030 URB2Q14146 1524 aaKnown RBP21.21■□□□□ 0.99
BEND3P3-201ENST00000611030 MYT1Q01538 1121 aa21.18■□□□□ 0.98
BEND3P3-201ENST00000611030 KIF21AQ7Z4S6 1674 aa21.17■□□□□ 0.98
BEND3P3-201ENST00000611030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.17■□□□□ 0.98
BEND3P3-201ENST00000611030 VPS8Q8N3P4 1428 aa21.16■□□□□ 0.98
BEND3P3-201ENST00000611030 CCER1Q8TC90 406 aaPredicted RBP21.16■□□□□ 0.98
BEND3P3-201ENST00000611030 ABCA10Q8WWZ4 1543 aa21.13■□□□□ 0.97
BEND3P3-201ENST00000611030 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
BEND3P3-201ENST00000611030 CENPBP07199 599 aaPredicted RBP21.12■□□□□ 0.97
BEND3P3-201ENST00000611030 CARMIL1Q5VZK9 1371 aa21.12■□□□□ 0.97
BEND3P3-201ENST00000611030 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
BEND3P3-201ENST00000611030 DIEXFQ68CQ4 756 aaKnown RBP21.11■□□□□ 0.97
BEND3P3-201ENST00000611030 GTF3C3Q9Y5Q9 886 aa21.07■□□□□ 0.96
BEND3P3-201ENST00000611030 WDR97A6NE52 1622 aa21.05■□□□□ 0.96
BEND3P3-201ENST00000611030 ARHGAP35Q9NRY4 1499 aa21.02■□□□□ 0.96
BEND3P3-201ENST00000611030 TDRD9Q8NDG6 1382 aaKnown RBP20.98■□□□□ 0.95
BEND3P3-201ENST00000611030 ABCA5Q8WWZ7 1642 aa20.94■□□□□ 0.94
BEND3P3-201ENST00000611030 TARBP1Q13395 1621 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms