RNA–Protein interactions for RNA: ENST00000612662.1

SLC35A4-203, Transcript of solute carrier family 35 member A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC35A4, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A4-203ENST00000612662 NISCHQ9Y2I1 1504 aa24.2■■□□□ 1.47
SLC35A4-203ENST00000612662 HRCP23327 699 aa22.29■■□□□ 1.16
SLC35A4-203ENST00000612662 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
SLC35A4-203ENST00000612662 PPARGC1BQ86YN6 1023 aaKnown RBP21.81■■□□□ 1.08
SLC35A4-203ENST00000612662 PCGF6Q9BYE7 350 aa21.64■■□□□ 1.06
SLC35A4-203ENST00000612662 MYO15BQ96JP2 1530 aa21.46■■□□□ 1.03
SLC35A4-203ENST00000612662 SUPT5HO00267 1087 aaKnown RBP21.36■■□□□ 1.01
SLC35A4-203ENST00000612662 SHROOM4Q9ULL8 1493 aa21.34■■□□□ 1.01
SLC35A4-203ENST00000612662 SCAF1Q9H7N4 1312 aaKnown RBP21.28■■□□□ 1
SLC35A4-203ENST00000612662 MYT1Q01538 1121 aa21.18■□□□□ 0.98
SLC35A4-203ENST00000612662 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
SLC35A4-203ENST00000612662 DCAF1Q9Y4B6 1507 aa21.08■□□□□ 0.96
SLC35A4-203ENST00000612662 CCDC180Q9P1Z9 1646 aa20.91■□□□□ 0.94
SLC35A4-203ENST00000612662 TRIM26Q12899 539 aaPredicted RBP20.87■□□□□ 0.93
SLC35A4-203ENST00000612662 ZEB1P37275 1124 aaPredicted RBP20.8■□□□□ 0.92
SLC35A4-203ENST00000612662 LOC105371045A0A1W2PR82 267 aa20.69■□□□□ 0.9
SLC35A4-203ENST00000612662 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
SLC35A4-203ENST00000612662 ACIN1Q9UKV3 1341 aaKnown RBP20.63■□□□□ 0.89
SLC35A4-203ENST00000612662 NEUROD1Q13562 356 aa20.57■□□□□ 0.88
SLC35A4-203ENST00000612662 GTF3C3Q9Y5Q9 886 aa20.48■□□□□ 0.87
SLC35A4-203ENST00000612662 CENPBP07199 599 aaPredicted RBP20.3■□□□□ 0.84
SLC35A4-203ENST00000612662 DIEXFQ68CQ4 756 aaKnown RBP20.1■□□□□ 0.81
SLC35A4-203ENST00000612662 ABCC9O60706 1549 aa20.08■□□□□ 0.81
SLC35A4-203ENST00000612662 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
SLC35A4-203ENST00000612662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.95■□□□□ 0.78
SLC35A4-203ENST00000612662 CCER1Q8TC90 406 aaPredicted RBP19.91■□□□□ 0.78
SLC35A4-203ENST00000612662 BCL11AQ9H165 835 aa19.82■□□□□ 0.76
SLC35A4-203ENST00000612662 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
SLC35A4-203ENST00000612662 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
SLC35A4-203ENST00000612662 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.75
SLC35A4-203ENST00000612662 FAM9AQ8IZU1 332 aaPredicted RBP19.75■□□□□ 0.75
SLC35A4-203ENST00000612662 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
SLC35A4-203ENST00000612662 ZNF316A6NFI3 1004 aaPredicted RBP19.63■□□□□ 0.73
SLC35A4-203ENST00000612662 ANP32EQ9BTT0 268 aa19.63■□□□□ 0.73
SLC35A4-203ENST00000612662 MIER1Q8N108 512 aa19.56■□□□□ 0.72
SLC35A4-203ENST00000612662 RSF1Q96T23 1441 aaPredicted RBP19.47■□□□□ 0.71
SLC35A4-203ENST00000612662 TSHZ2Q9NRE2 1034 aa19.44■□□□□ 0.7
SLC35A4-203ENST00000612662 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
SLC35A4-203ENST00000612662 SUPT16HQ9Y5B9 1047 aaKnown RBP19.43■□□□□ 0.7
SLC35A4-203ENST00000612662 RB1CC1Q8TDY2 1594 aa19.42■□□□□ 0.7
SLC35A4-203ENST00000612662 CLSPNQ9HAW4 1339 aa19.38■□□□□ 0.69
SLC35A4-203ENST00000612662 NACADO15069 1562 aa19.28■□□□□ 0.68
SLC35A4-203ENST00000612662 PRKCSHP14314 528 aaPredicted RBP19.24■□□□□ 0.67
SLC35A4-203ENST00000612662 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
SLC35A4-203ENST00000612662 SCRIBQ14160 1630 aa19.1■□□□□ 0.65
SLC35A4-203ENST00000612662 CEP162Q5TB80 1403 aa19.02■□□□□ 0.63
SLC35A4-203ENST00000612662 EIF4G1Q04637 1599 aaKnown RBP18.97■□□□□ 0.63
SLC35A4-203ENST00000612662 BCANQ96GW7 911 aa18.95■□□□□ 0.62
SLC35A4-203ENST00000612662 RBM19Q9Y4C8 960 aaKnown RBP18.93■□□□□ 0.62
SLC35A4-203ENST00000612662 HNRNPUL2Q1KMD3 747 aaKnown RBP18.92■□□□□ 0.62
SLC35A4-203ENST00000612662 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
SLC35A4-203ENST00000612662 MROH2BQ7Z745 1585 aa18.88■□□□□ 0.61
SLC35A4-203ENST00000612662 TNIKQ9UKE5 1360 aa18.85■□□□□ 0.61
SLC35A4-203ENST00000612662 CECR2Q9BXF3 1484 aa18.85■□□□□ 0.61
SLC35A4-203ENST00000612662 WIZO95785 1651 aa18.82■□□□□ 0.6
SLC35A4-203ENST00000612662 MSH5O43196 834 aa18.82■□□□□ 0.6
SLC35A4-203ENST00000612662 FKBP8Q14318 412 aa18.82■□□□□ 0.6
SLC35A4-203ENST00000612662 UNC13AQ9UPW8 1703 aa18.79■□□□□ 0.6
SLC35A4-203ENST00000612662 BAZ1AQ9NRL2 1556 aaPredicted RBP18.79■□□□□ 0.6
SLC35A4-203ENST00000612662 ERICH6Q7L0X2 663 aa18.77■□□□□ 0.6
SLC35A4-203ENST00000612662 CCDC88BA6NC98 1476 aa18.75■□□□□ 0.59
SLC35A4-203ENST00000612662 KCNH8Q96L42 1107 aa18.74■□□□□ 0.59
SLC35A4-203ENST00000612662 ABCC8Q09428 1581 aa18.71■□□□□ 0.59
SLC35A4-203ENST00000612662 EEA1Q15075 1411 aa18.68■□□□□ 0.58
SLC35A4-203ENST00000612662 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
SLC35A4-203ENST00000612662 ITGAEP38570 1179 aa18.67■□□□□ 0.58
SLC35A4-203ENST00000612662 SOGA1O94964 1423 aa18.66■□□□□ 0.58
SLC35A4-203ENST00000612662 UBTFP17480 764 aaKnown RBP18.66■□□□□ 0.58
SLC35A4-203ENST00000612662 NEFLP07196 543 aa18.63■□□□□ 0.57
SLC35A4-203ENST00000612662 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
SLC35A4-203ENST00000612662 FANCIQ9NVI1 1328 aa18.62■□□□□ 0.57
SLC35A4-203ENST00000612662 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
SLC35A4-203ENST00000612662 DEKP35659 375 aaKnown RBP18.56■□□□□ 0.56
SLC35A4-203ENST00000612662 APLP2Q06481 763 aa18.56■□□□□ 0.56
SLC35A4-203ENST00000612662 MYT1LQ9UL68 1186 aa18.56■□□□□ 0.56
SLC35A4-203ENST00000612662 ANO8Q9HCE9 1232 aaPredicted RBP18.56■□□□□ 0.56
SLC35A4-203ENST00000612662 RUSC2Q8N2Y8 1516 aa18.53■□□□□ 0.56
SLC35A4-203ENST00000612662 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
SLC35A4-203ENST00000612662 VPS8Q8N3P4 1428 aa18.47■□□□□ 0.55
SLC35A4-203ENST00000612662 SMARCA2P51531 1590 aa18.46■□□□□ 0.55
SLC35A4-203ENST00000612662 CLIP1P30622 1438 aa18.45■□□□□ 0.54
SLC35A4-203ENST00000612662 KIF21BO75037 1637 aa18.43■□□□□ 0.54
SLC35A4-203ENST00000612662 TRIM52Q96A61 297 aa18.42■□□□□ 0.54
SLC35A4-203ENST00000612662 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
SLC35A4-203ENST00000612662 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
SLC35A4-203ENST00000612662 SALL2Q9Y467 1007 aaPredicted RBP18.36■□□□□ 0.53
SLC35A4-203ENST00000612662 DDX10Q13206 875 aaKnown RBP18.36■□□□□ 0.53
SLC35A4-203ENST00000612662 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.53
SLC35A4-203ENST00000612662 BAZ1BQ9UIG0 1483 aaKnown RBP18.32■□□□□ 0.52
SLC35A4-203ENST00000612662 ERICH6BQ5W0A0 696 aa18.31■□□□□ 0.52
SLC35A4-203ENST00000612662 SMARCA4P51532 1647 aa18.28■□□□□ 0.52
SLC35A4-203ENST00000612662 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
SLC35A4-203ENST00000612662 NBR1Q14596 966 aa18.26■□□□□ 0.51
SLC35A4-203ENST00000612662 IRX6P78412 446 aaPredicted RBP18.26■□□□□ 0.51
SLC35A4-203ENST00000612662 PPP1R15AO75807 674 aaPredicted RBP18.26■□□□□ 0.51
SLC35A4-203ENST00000612662 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
SLC35A4-203ENST00000612662 CUX2O14529 1486 aa18.23■□□□□ 0.51
SLC35A4-203ENST00000612662 NOP58Q9Y2X3 529 aaKnown RBP18.21■□□□□ 0.51
SLC35A4-203ENST00000612662 ANP32CO43423 234 aa18.19■□□□□ 0.5
SLC35A4-203ENST00000612662 MAPKBP1O60336 1514 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms