Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 CICP17-201ENST00000418553 2377 ntBASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 AC036164.1-201ENST00000570544 333 ntBASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 SAMD11P1-201ENST00000571429 661 ntBASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 AL391069.4-201ENST00000609583 481 ntBASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 AC009118.2-201ENST00000613275 655 ntBASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 AJ011932.1-201ENST00000621707 465 ntBASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 AL354702.1-201ENST00000442006 1960 ntBASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTN4IP1Q8WWV3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms