RNA–Protein interactions for RNA: ENST00000268261.8

PMM2-201, Transcript of phosphomannomutase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMM2, Length 2,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-201ENST00000268261 NISCHQ9Y2I1 1504 aa33.27■■■□□ 2.92
PMM2-201ENST00000268261 CCDC180Q9P1Z9 1646 aa28.82■■■□□ 2.2
PMM2-201ENST00000268261 ZCCHC6Q5VYS8 1495 aaKnown RBP28.03■■■□□ 2.08
PMM2-201ENST00000268261 DCAF1Q9Y4B6 1507 aa27.45■■□□□ 1.99
PMM2-201ENST00000268261 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
PMM2-201ENST00000268261 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
PMM2-201ENST00000268261 ABCC9O60706 1549 aa27.05■■□□□ 1.92
PMM2-201ENST00000268261 MYO15BQ96JP2 1530 aa26.99■■□□□ 1.91
PMM2-201ENST00000268261 NACADO15069 1562 aa26.74■■□□□ 1.87
PMM2-201ENST00000268261 SCRIBQ14160 1630 aa26.64■■□□□ 1.85
PMM2-201ENST00000268261 SUPT5HO00267 1087 aaKnown RBP26.49■■□□□ 1.83
PMM2-201ENST00000268261 RB1CC1Q8TDY2 1594 aa26.44■■□□□ 1.82
PMM2-201ENST00000268261 UNC13AQ9UPW8 1703 aa26.09■■□□□ 1.77
PMM2-201ENST00000268261 RSF1Q96T23 1441 aaPredicted RBP25.96■■□□□ 1.75
PMM2-201ENST00000268261 CECR2Q9BXF3 1484 aa25.92■■□□□ 1.74
PMM2-201ENST00000268261 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
PMM2-201ENST00000268261 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
PMM2-201ENST00000268261 BAZ1AQ9NRL2 1556 aaPredicted RBP25.62■■□□□ 1.69
PMM2-201ENST00000268261 WIZO95785 1651 aa25.6■■□□□ 1.69
PMM2-201ENST00000268261 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.69
PMM2-201ENST00000268261 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
PMM2-201ENST00000268261 SMARCA4P51532 1647 aa25.53■■□□□ 1.68
PMM2-201ENST00000268261 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
PMM2-201ENST00000268261 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
PMM2-201ENST00000268261 SMARCA2P51531 1590 aa25.08■■□□□ 1.61
PMM2-201ENST00000268261 EIF4G1Q04637 1599 aaKnown RBP25.07■■□□□ 1.6
PMM2-201ENST00000268261 CCDC88BA6NC98 1476 aa25.04■■□□□ 1.6
PMM2-201ENST00000268261 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
PMM2-201ENST00000268261 BAZ1BQ9UIG0 1483 aaKnown RBP24.86■■□□□ 1.57
PMM2-201ENST00000268261 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
PMM2-201ENST00000268261 NCAPD3P42695 1498 aa24.71■■□□□ 1.55
PMM2-201ENST00000268261 HMGXB3Q12766 1538 aa24.7■■□□□ 1.55
PMM2-201ENST00000268261 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
PMM2-201ENST00000268261 LOC105371045A0A1W2PR82 267 aa24.62■■□□□ 1.53
PMM2-201ENST00000268261 CC2D2AQ9P2K1 1620 aa24.49■■□□□ 1.51
PMM2-201ENST00000268261 FAM9AQ8IZU1 332 aaPredicted RBP24.45■■□□□ 1.51
PMM2-201ENST00000268261 WRNQ14191 1432 aaPredicted RBP eCLIP24.38■■□□□ 1.49
PMM2-201ENST00000268261 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
PMM2-201ENST00000268261 CFTRP13569 1480 aa24.28■■□□□ 1.48
PMM2-201ENST00000268261 SOGA1O94964 1423 aa24.26■■□□□ 1.47
PMM2-201ENST00000268261 RUSC2Q8N2Y8 1516 aa24.19■■□□□ 1.46
PMM2-201ENST00000268261 PRDM2Q13029 1718 aa24.18■■□□□ 1.46
PMM2-201ENST00000268261 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
PMM2-201ENST00000268261 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
PMM2-201ENST00000268261 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
PMM2-201ENST00000268261 EEA1Q15075 1411 aa24.1■■□□□ 1.45
PMM2-201ENST00000268261 CADPSQ9ULU8 1353 aa24.1■■□□□ 1.45
PMM2-201ENST00000268261 CUX1P39880 1505 aa24.08■■□□□ 1.44
PMM2-201ENST00000268261 HRCP23327 699 aa24.06■■□□□ 1.44
PMM2-201ENST00000268261 CSRNP3Q8WYN3 585 aa24■■□□□ 1.43
PMM2-201ENST00000268261 DNAJC5BQ9UF47 199 aa23.93■■□□□ 1.42
PMM2-201ENST00000268261 NESP48681 1621 aa23.91■■□□□ 1.42
PMM2-201ENST00000268261 KIF21BO75037 1637 aa23.87■■□□□ 1.41
PMM2-201ENST00000268261 FANCD2Q9BXW9 1451 aa23.86■■□□□ 1.41
PMM2-201ENST00000268261 GOLGA3Q08378 1498 aa23.85■■□□□ 1.41
PMM2-201ENST00000268261 TNIKQ9UKE5 1360 aa23.84■■□□□ 1.41
PMM2-201ENST00000268261 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
PMM2-201ENST00000268261 LAMC3Q9Y6N6 1575 aa23.8■■□□□ 1.4
PMM2-201ENST00000268261 CEP162Q5TB80 1403 aa23.78■■□□□ 1.4
PMM2-201ENST00000268261 PCGF6Q9BYE7 350 aa23.76■■□□□ 1.39
PMM2-201ENST00000268261 RAPGEF2Q9Y4G8 1499 aa23.73■■□□□ 1.39
PMM2-201ENST00000268261 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
PMM2-201ENST00000268261 UBTFP17480 764 aaKnown RBP23.7■■□□□ 1.38
PMM2-201ENST00000268261 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
PMM2-201ENST00000268261 KIF27Q86VH2 1401 aa23.68■■□□□ 1.38
PMM2-201ENST00000268261 PRXQ9BXM0 1461 aa23.68■■□□□ 1.38
PMM2-201ENST00000268261 TOPBP1Q92547 1522 aa23.65■■□□□ 1.38
PMM2-201ENST00000268261 ERICH3Q5RHP9 1530 aa23.63■■□□□ 1.37
PMM2-201ENST00000268261 CUX2O14529 1486 aa23.61■■□□□ 1.37
PMM2-201ENST00000268261 TRIM26Q12899 539 aaPredicted RBP23.6■■□□□ 1.37
PMM2-201ENST00000268261 URB2Q14146 1524 aaKnown RBP23.6■■□□□ 1.37
PMM2-201ENST00000268261 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
PMM2-201ENST00000268261 POLA1P09884 1462 aaPredicted RBP23.58■■□□□ 1.37
PMM2-201ENST00000268261 PDS5BQ9NTI5 1447 aa23.57■■□□□ 1.36
PMM2-201ENST00000268261 RAD54L2Q9Y4B4 1467 aa23.54■■□□□ 1.36
PMM2-201ENST00000268261 IGF1RP08069 1367 aa23.51■■□□□ 1.35
PMM2-201ENST00000268261 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
PMM2-201ENST00000268261 CLIP1P30622 1438 aa23.49■■□□□ 1.35
PMM2-201ENST00000268261 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
PMM2-201ENST00000268261 PPARGC1BQ86YN6 1023 aaKnown RBP23.45■■□□□ 1.35
PMM2-201ENST00000268261 CARMIL1Q5VZK9 1371 aa23.36■■□□□ 1.33
PMM2-201ENST00000268261 VPS8Q8N3P4 1428 aa23.34■■□□□ 1.33
PMM2-201ENST00000268261 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.32
PMM2-201ENST00000268261 TARBP1Q13395 1621 aaKnown RBP23.31■■□□□ 1.32
PMM2-201ENST00000268261 RANGAP1P46060 587 aaPredicted RBP23.31■■□□□ 1.32
PMM2-201ENST00000268261 ARAP1Q96P48 1450 aa23.3■■□□□ 1.32
PMM2-201ENST00000268261 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
PMM2-201ENST00000268261 CUL7Q14999 1698 aa23.26■■□□□ 1.31
PMM2-201ENST00000268261 TDRD9Q8NDG6 1382 aaKnown RBP23.24■■□□□ 1.31
PMM2-201ENST00000268261 ARHGAP35Q9NRY4 1499 aa23.23■■□□□ 1.31
PMM2-201ENST00000268261 WDR62O43379 1518 aa23.2■■□□□ 1.31
PMM2-201ENST00000268261 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.31
PMM2-201ENST00000268261 TTBK1Q5TCY1 1321 aaPredicted RBP23.18■■□□□ 1.3
PMM2-201ENST00000268261 THOC2Q8NI27 1593 aaKnown RBP23.11■■□□□ 1.29
PMM2-201ENST00000268261 PBRM1Q86U86 1689 aa23.1■■□□□ 1.29
PMM2-201ENST00000268261 CTTNBP2Q8WZ74 1663 aa23.09■■□□□ 1.29
PMM2-201ENST00000268261 ERCC6Q03468 1493 aa23.07■■□□□ 1.28
PMM2-201ENST00000268261 AQRO60306 1485 aaKnown RBP eCLIP23.06■■□□□ 1.281e-7■■■■□ 20.2
PMM2-201ENST00000268261 IFT140Q96RY7 1462 aa23.04■■□□□ 1.28
PMM2-201ENST00000268261 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms