Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA4P54764 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA4P54764 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA4P54764 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA4P54764 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA4P54764 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA4P54764 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA4P54764 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
EPHA4P54764 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA4P54764 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA4P54764 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA4P54764 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA4P54764 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA4P54764 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA4P54764 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA4P54764 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.27□□□□□ -0.12
EPHA4P54764 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA4P54764 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA4P54764 LINC01101-201ENST00000622953 1884 ntBASIC14.27□□□□□ -0.12
EPHA4P54764 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA4P54764 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA4P54764 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA4P54764 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA4P54764 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA4P54764 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.27□□□□□ -0.12
EPHA4P54764 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.27□□□□□ -0.12
EPHA4P54764 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.27□□□□□ -0.12
EPHA4P54764 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.27□□□□□ -0.12
EPHA4P54764 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA4P54764 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA4P54764 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 SPTLC1P5-201ENST00000450718 252 ntBASIC14.27□□□□□ -0.13
EPHA4P54764 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.27□□□□□ -0.13
EPHA4P54764 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC14.27□□□□□ -0.13
EPHA4P54764 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.27□□□□□ -0.13
EPHA4P54764 HLA-J-204ENST00000495278 958 ntBASIC14.27□□□□□ -0.13
EPHA4P54764 AC125604.1-201ENST00000496255 707 ntBASIC14.27□□□□□ -0.13
EPHA4P54764 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.27□□□□□ -0.13
EPHA4P54764 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
EPHA4P54764 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
EPHA4P54764 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.27□□□□□ -0.13
EPHA4P54764 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.27□□□□□ -0.13
EPHA4P54764 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.27□□□□□ -0.13
EPHA4P54764 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.27□□□□□ -0.13
EPHA4P54764 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.27□□□□□ -0.13
EPHA4P54764 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.27□□□□□ -0.13
EPHA4P54764 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
EPHA4P54764 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.27□□□□□ -0.13
EPHA4P54764 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
EPHA4P54764 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
EPHA4P54764 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.27□□□□□ -0.13
EPHA4P54764 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.27□□□□□ -0.13
EPHA4P54764 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA4P54764 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.26□□□□□ -0.13
EPHA4P54764 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.26□□□□□ -0.13
EPHA4P54764 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.26□□□□□ -0.13
EPHA4P54764 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.26□□□□□ -0.13
EPHA4P54764 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.26□□□□□ -0.13
EPHA4P54764 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.26□□□□□ -0.13
EPHA4P54764 MRPL37P1-201ENST00000592451 1337 ntBASIC14.26□□□□□ -0.13
EPHA4P54764 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA4P54764 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
EPHA4P54764 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.26□□□□□ -0.13
EPHA4P54764 AL157407.1-201ENST00000435784 904 ntBASIC14.26□□□□□ -0.13
EPHA4P54764 VDAC1P1-201ENST00000439229 848 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms