RNA–Protein interactions for RNA: ENST00000543494.1

AP003419.2-201, humanhuman

APPRIS P1 TSL 3 BASIC

Gene AP003419.2, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003419.2-201ENST00000543494 NISCHQ9Y2I1 1504 aa36.06■■■■□ 3.36
AP003419.2-201ENST00000543494 CCDC180Q9P1Z9 1646 aa32.28■■■□□ 2.76
AP003419.2-201ENST00000543494 ABCC9O60706 1549 aa32.14■■■□□ 2.74
AP003419.2-201ENST00000543494 RB1CC1Q8TDY2 1594 aa30.66■■■□□ 2.5
AP003419.2-201ENST00000543494 NACADO15069 1562 aa30.51■■■□□ 2.47
AP003419.2-201ENST00000543494 DCAF8L2P0C7V8 631 aa30.31■■■□□ 2.44
AP003419.2-201ENST00000543494 MYO15BQ96JP2 1530 aa30.17■■■□□ 2.42
AP003419.2-201ENST00000543494 DNAJC5BQ9UF47 199 aa30.04■■■□□ 2.4
AP003419.2-201ENST00000543494 PABPN1Q86U42 306 aaKnown RBP eCLIP29.94■■■□□ 2.38
AP003419.2-201ENST00000543494 ZCCHC6Q5VYS8 1495 aaKnown RBP29.93■■■□□ 2.38
AP003419.2-201ENST00000543494 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
AP003419.2-201ENST00000543494 DCAF1Q9Y4B6 1507 aa29.82■■■□□ 2.36
AP003419.2-201ENST00000543494 BICRAQ9NZM4 1560 aa29.77■■■□□ 2.36
AP003419.2-201ENST00000543494 SHROOM4Q9ULL8 1493 aa29.44■■■□□ 2.3
AP003419.2-201ENST00000543494 SCRIBQ14160 1630 aa29.39■■■□□ 2.3
AP003419.2-201ENST00000543494 CC2D2AQ9P2K1 1620 aa29.04■■■□□ 2.24
AP003419.2-201ENST00000543494 EIF4G1Q04637 1599 aaKnown RBP29.03■■■□□ 2.24
AP003419.2-201ENST00000543494 CECR2Q9BXF3 1484 aa28.96■■■□□ 2.23
AP003419.2-201ENST00000543494 NCAPD3P42695 1498 aa28.18■■■□□ 2.1
AP003419.2-201ENST00000543494 ATAD2BQ9ULI0 1458 aa28.1■■■□□ 2.09
AP003419.2-201ENST00000543494 SMARCA4P51532 1647 aa28.07■■■□□ 2.08
AP003419.2-201ENST00000543494 SMARCA2P51531 1590 aa28.03■■■□□ 2.08
AP003419.2-201ENST00000543494 BAZ1AQ9NRL2 1556 aaPredicted RBP27.98■■■□□ 2.07
AP003419.2-201ENST00000543494 HMGXB3Q12766 1538 aa27.97■■■□□ 2.07
AP003419.2-201ENST00000543494 PEG3Q9GZU2 1588 aa27.85■■■□□ 2.05
AP003419.2-201ENST00000543494 BAZ1BQ9UIG0 1483 aaKnown RBP27.82■■■□□ 2.04
AP003419.2-201ENST00000543494 MROH2BQ7Z745 1585 aa27.77■■■□□ 2.04
AP003419.2-201ENST00000543494 ERCC6Q03468 1493 aa27.75■■■□□ 2.03
AP003419.2-201ENST00000543494 CUX2O14529 1486 aa27.69■■■□□ 2.02
AP003419.2-201ENST00000543494 NESP48681 1621 aa27.64■■■□□ 2.02
AP003419.2-201ENST00000543494 DNAJC5Q9H3Z4 198 aa27.51■■□□□ 1.99
AP003419.2-201ENST00000543494 LAMC3Q9Y6N6 1575 aa27.5■■□□□ 1.99
AP003419.2-201ENST00000543494 WIZO95785 1651 aa27.41■■□□□ 1.98
AP003419.2-201ENST00000543494 THOC2Q8NI27 1593 aaKnown RBP27.35■■□□□ 1.97
AP003419.2-201ENST00000543494 PDS5BQ9NTI5 1447 aa27.34■■□□□ 1.97
AP003419.2-201ENST00000543494 CADPSQ9ULU8 1353 aa27.32■■□□□ 1.96
AP003419.2-201ENST00000543494 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
AP003419.2-201ENST00000543494 RSF1Q96T23 1441 aaPredicted RBP27.25■■□□□ 1.95
AP003419.2-201ENST00000543494 TOP2AP11388 1531 aaKnown RBP27.12■■□□□ 1.93
AP003419.2-201ENST00000543494 MRC2Q9UBG0 1479 aa27.1■■□□□ 1.93
AP003419.2-201ENST00000543494 CFTRP13569 1480 aa27.05■■□□□ 1.92
AP003419.2-201ENST00000543494 WDR62O43379 1518 aa27.04■■□□□ 1.92
AP003419.2-201ENST00000543494 CEP164Q9UPV0 1460 aa27.01■■□□□ 1.91
AP003419.2-201ENST00000543494 FANCD2Q9BXW9 1451 aa27■■□□□ 1.91
AP003419.2-201ENST00000543494 CCDC88BA6NC98 1476 aa26.8■■□□□ 1.88
AP003419.2-201ENST00000543494 URB2Q14146 1524 aaKnown RBP26.75■■□□□ 1.87
AP003419.2-201ENST00000543494 PRDM2Q13029 1718 aa26.7■■□□□ 1.87
AP003419.2-201ENST00000543494 TOPBP1Q92547 1522 aa26.49■■□□□ 1.83
AP003419.2-201ENST00000543494 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
AP003419.2-201ENST00000543494 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
AP003419.2-201ENST00000543494 OSCARQ8IYS5 282 aa26.42■■□□□ 1.82
AP003419.2-201ENST00000543494 DNMBPQ6XZF7 1577 aa26.41■■□□□ 1.82
AP003419.2-201ENST00000543494 ZNF608Q9ULD9 1512 aaPredicted RBP26.4■■□□□ 1.82
AP003419.2-201ENST00000543494 TRIM41Q8WV44 630 aa26.31■■□□□ 1.8
AP003419.2-201ENST00000543494 EIF4G3O43432 1585 aaKnown RBP26.25■■□□□ 1.79
AP003419.2-201ENST00000543494 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
AP003419.2-201ENST00000543494 POLA1P09884 1462 aaPredicted RBP26.24■■□□□ 1.79
AP003419.2-201ENST00000543494 AQRO60306 1485 aaKnown RBP eCLIP26.18■■□□□ 1.782e-8■■■■■ 71
AP003419.2-201ENST00000543494 RAD54L2Q9Y4B4 1467 aa26.12■■□□□ 1.77
AP003419.2-201ENST00000543494 SOGA1O94964 1423 aa26.12■■□□□ 1.77
AP003419.2-201ENST00000543494 SUPT5HO00267 1087 aaKnown RBP26.09■■□□□ 1.77
AP003419.2-201ENST00000543494 FGD5Q6ZNL6 1462 aa26.09■■□□□ 1.77
AP003419.2-201ENST00000543494 CUX1P39880 1505 aa26.08■■□□□ 1.77
AP003419.2-201ENST00000543494 RIMBP3CA6NJZ7 1639 aa26.04■■□□□ 1.76
AP003419.2-201ENST00000543494 RIMBP3BA6NNM3 1639 aa26.04■■□□□ 1.76
AP003419.2-201ENST00000543494 RIMBP3Q9UFD9 1639 aa26.04■■□□□ 1.76
AP003419.2-201ENST00000543494 TDRD9Q8NDG6 1382 aaKnown RBP26.04■■□□□ 1.76
AP003419.2-201ENST00000543494 WDR97A6NE52 1622 aa26.02■■□□□ 1.76
AP003419.2-201ENST00000543494 ARHGEF11O15085 1522 aa26■■□□□ 1.75
AP003419.2-201ENST00000543494 CHD1O14646 1710 aa26■■□□□ 1.75
AP003419.2-201ENST00000543494 FBLN2P98095 1184 aa25.95■■□□□ 1.74
AP003419.2-201ENST00000543494 SNAPC4Q5SXM2 1469 aa25.92■■□□□ 1.74
AP003419.2-201ENST00000543494 GRIN2BQ13224 1484 aa25.89■■□□□ 1.73
AP003419.2-201ENST00000543494 MAGI1Q96QZ7 1491 aaPredicted RBP25.88■■□□□ 1.73
AP003419.2-201ENST00000543494 ABCA10Q8WWZ4 1543 aa25.82■■□□□ 1.72
AP003419.2-201ENST00000543494 CHMP7Q8WUX9 453 aaPredicted RBP25.81■■□□□ 1.72
AP003419.2-201ENST00000543494 GAPVD1Q14C86 1478 aa25.8■■□□□ 1.72
AP003419.2-201ENST00000543494 SYNJ2O15056 1496 aa25.79■■□□□ 1.72
AP003419.2-201ENST00000543494 CYB5RLQ6IPT4 315 aa25.78■■□□□ 1.72
AP003419.2-201ENST00000543494 ARAP1Q96P48 1450 aa25.76■■□□□ 1.71
AP003419.2-201ENST00000543494 CLASP1Q7Z460 1538 aa25.76■■□□□ 1.71
AP003419.2-201ENST00000543494 ABCA5Q8WWZ7 1642 aa25.75■■□□□ 1.71
AP003419.2-201ENST00000543494 SYNJ1O43426 1573 aa25.75■■□□□ 1.71
AP003419.2-201ENST00000543494 PBRM1Q86U86 1689 aa25.74■■□□□ 1.71
AP003419.2-201ENST00000543494 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
AP003419.2-201ENST00000543494 TOP2BQ02880 1626 aa25.7■■□□□ 1.7
AP003419.2-201ENST00000543494 BIVM-ERCC5R4GMW8 1640 aa25.69■■□□□ 1.7
AP003419.2-201ENST00000543494 GRIN2AQ12879 1464 aa25.55■■□□□ 1.68
AP003419.2-201ENST00000543494 ADAMTS12P58397 1594 aa25.54■■□□□ 1.68
AP003419.2-201ENST00000543494 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
AP003419.2-201ENST00000543494 FHAD1B1AJZ9 1412 aa25.49■■□□□ 1.67
AP003419.2-201ENST00000543494 NUP160Q12769 1436 aa25.48■■□□□ 1.67
AP003419.2-201ENST00000543494 CEP170Q5SW79 1584 aa25.44■■□□□ 1.66
AP003419.2-201ENST00000543494 TRHP20396 242 aaPredicted RBP25.43■■□□□ 1.66
AP003419.2-201ENST00000543494 ERCC6L2Q5T890 1561 aa25.35■■□□□ 1.65
AP003419.2-201ENST00000543494 SHROOM2Q13796 1616 aa25.33■■□□□ 1.65
AP003419.2-201ENST00000543494 KIF27Q86VH2 1401 aa25.22■■□□□ 1.63
AP003419.2-201ENST00000543494 PRG4Q92954 1404 aaPredicted RBP25.2■■□□□ 1.62
AP003419.2-201ENST00000543494 IGF1RP08069 1367 aa25.19■■□□□ 1.62
AP003419.2-201ENST00000543494 JPH4Q96JJ6 628 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms