RNA–Protein interactions for RNA: ENST00000378779.4

DKFZp779M0652-201, humanhuman

TSL 1 (best) BASIC

Gene DKFZp779M0652, Length 649 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKFZp779M0652-201ENST00000378779 NISCHQ9Y2I1 1504 aa36.26■■■■□ 3.4
DKFZp779M0652-201ENST00000378779 CCDC180Q9P1Z9 1646 aa32.62■■■□□ 2.81
DKFZp779M0652-201ENST00000378779 ABCC9O60706 1549 aa32.36■■■□□ 2.77
DKFZp779M0652-201ENST00000378779 RB1CC1Q8TDY2 1594 aa30.93■■■□□ 2.54
DKFZp779M0652-201ENST00000378779 NACADO15069 1562 aa30.75■■■□□ 2.51
DKFZp779M0652-201ENST00000378779 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
DKFZp779M0652-201ENST00000378779 DCAF8L2P0C7V8 631 aa30.35■■■□□ 2.45
DKFZp779M0652-201ENST00000378779 UNC13AQ9UPW8 1703 aa30.34■■■□□ 2.45
DKFZp779M0652-201ENST00000378779 DNAJC5BQ9UF47 199 aa30.28■■■□□ 2.44
DKFZp779M0652-201ENST00000378779 ZCCHC6Q5VYS8 1495 aaKnown RBP30.08■■■□□ 2.41
DKFZp779M0652-201ENST00000378779 PABPN1Q86U42 306 aaKnown RBP eCLIP30.07■■■□□ 2.4
DKFZp779M0652-201ENST00000378779 BICRAQ9NZM4 1560 aa30.06■■■□□ 2.4
DKFZp779M0652-201ENST00000378779 DCAF1Q9Y4B6 1507 aa30.03■■■□□ 2.4
DKFZp779M0652-201ENST00000378779 SHROOM4Q9ULL8 1493 aa29.7■■■□□ 2.35
DKFZp779M0652-201ENST00000378779 SCRIBQ14160 1630 aa29.58■■■□□ 2.33
DKFZp779M0652-201ENST00000378779 CC2D2AQ9P2K1 1620 aa29.32■■■□□ 2.28
DKFZp779M0652-201ENST00000378779 EIF4G1Q04637 1599 aaKnown RBP29.29■■■□□ 2.28
DKFZp779M0652-201ENST00000378779 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
DKFZp779M0652-201ENST00000378779 NCAPD3P42695 1498 aa28.37■■■□□ 2.13
DKFZp779M0652-201ENST00000378779 SMARCA4P51532 1647 aa28.3■■■□□ 2.12
DKFZp779M0652-201ENST00000378779 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
DKFZp779M0652-201ENST00000378779 SMARCA2P51531 1590 aa28.23■■■□□ 2.11
DKFZp779M0652-201ENST00000378779 HMGXB3Q12766 1538 aa28.2■■■□□ 2.1
DKFZp779M0652-201ENST00000378779 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
DKFZp779M0652-201ENST00000378779 PEG3Q9GZU2 1588 aa28.07■■■□□ 2.08
DKFZp779M0652-201ENST00000378779 BAZ1BQ9UIG0 1483 aaKnown RBP27.98■■■□□ 2.07
DKFZp779M0652-201ENST00000378779 CUX2O14529 1486 aa27.95■■■□□ 2.07
DKFZp779M0652-201ENST00000378779 ERCC6Q03468 1493 aa27.93■■■□□ 2.06
DKFZp779M0652-201ENST00000378779 MROH2BQ7Z745 1585 aa27.91■■■□□ 2.06
DKFZp779M0652-201ENST00000378779 NESP48681 1621 aa27.84■■■□□ 2.05
DKFZp779M0652-201ENST00000378779 DNAJC5Q9H3Z4 198 aa27.79■■■□□ 2.04
DKFZp779M0652-201ENST00000378779 LAMC3Q9Y6N6 1575 aa27.75■■■□□ 2.03
DKFZp779M0652-201ENST00000378779 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
DKFZp779M0652-201ENST00000378779 WIZO95785 1651 aa27.6■■■□□ 2.01
DKFZp779M0652-201ENST00000378779 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
DKFZp779M0652-201ENST00000378779 PDS5BQ9NTI5 1447 aa27.51■■□□□ 1.99
DKFZp779M0652-201ENST00000378779 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
DKFZp779M0652-201ENST00000378779 RSF1Q96T23 1441 aaPredicted RBP27.34■■□□□ 1.97
DKFZp779M0652-201ENST00000378779 MRC2Q9UBG0 1479 aa27.29■■□□□ 1.96
DKFZp779M0652-201ENST00000378779 WDR62O43379 1518 aa27.26■■□□□ 1.96
DKFZp779M0652-201ENST00000378779 TOP2AP11388 1531 aaKnown RBP27.26■■□□□ 1.96
DKFZp779M0652-201ENST00000378779 CFTRP13569 1480 aa27.2■■□□□ 1.95
DKFZp779M0652-201ENST00000378779 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
DKFZp779M0652-201ENST00000378779 FANCD2Q9BXW9 1451 aa27.15■■□□□ 1.94
DKFZp779M0652-201ENST00000378779 PRDM2Q13029 1718 aa27.08■■□□□ 1.93
DKFZp779M0652-201ENST00000378779 URB2Q14146 1524 aaKnown RBP26.94■■□□□ 1.9
DKFZp779M0652-201ENST00000378779 CCDC88BA6NC98 1476 aa26.92■■□□□ 1.9
DKFZp779M0652-201ENST00000378779 TOPBP1Q92547 1522 aa26.66■■□□□ 1.86
DKFZp779M0652-201ENST00000378779 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
DKFZp779M0652-201ENST00000378779 ABCC8Q09428 1581 aa26.64■■□□□ 1.86
DKFZp779M0652-201ENST00000378779 DNMBPQ6XZF7 1577 aa26.61■■□□□ 1.85
DKFZp779M0652-201ENST00000378779 OSCARQ8IYS5 282 aa26.59■■□□□ 1.85
DKFZp779M0652-201ENST00000378779 ZNF608Q9ULD9 1512 aaPredicted RBP26.57■■□□□ 1.84
DKFZp779M0652-201ENST00000378779 EIF4G3O43432 1585 aaKnown RBP26.49■■□□□ 1.83
DKFZp779M0652-201ENST00000378779 TARBP1Q13395 1621 aaKnown RBP26.48■■□□□ 1.83
DKFZp779M0652-201ENST00000378779 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
DKFZp779M0652-201ENST00000378779 POLA1P09884 1462 aaPredicted RBP26.4■■□□□ 1.82
DKFZp779M0652-201ENST00000378779 RIMBP3CA6NJZ7 1639 aa26.33■■□□□ 1.81
DKFZp779M0652-201ENST00000378779 RIMBP3BA6NNM3 1639 aa26.33■■□□□ 1.81
DKFZp779M0652-201ENST00000378779 RIMBP3Q9UFD9 1639 aa26.33■■□□□ 1.81
DKFZp779M0652-201ENST00000378779 CHD1O14646 1710 aa26.31■■□□□ 1.8
DKFZp779M0652-201ENST00000378779 AQRO60306 1485 aaKnown RBP eCLIP26.31■■□□□ 1.8
DKFZp779M0652-201ENST00000378779 WDR97A6NE52 1622 aa26.27■■□□□ 1.8
DKFZp779M0652-201ENST00000378779 RAD54L2Q9Y4B4 1467 aa26.24■■□□□ 1.79
DKFZp779M0652-201ENST00000378779 ARHGEF11O15085 1522 aa26.23■■□□□ 1.79
DKFZp779M0652-201ENST00000378779 CUX1P39880 1505 aa26.23■■□□□ 1.79
DKFZp779M0652-201ENST00000378779 SOGA1O94964 1423 aa26.22■■□□□ 1.79
DKFZp779M0652-201ENST00000378779 FGD5Q6ZNL6 1462 aa26.22■■□□□ 1.79
DKFZp779M0652-201ENST00000378779 TDRD9Q8NDG6 1382 aaKnown RBP26.14■■□□□ 1.78
DKFZp779M0652-201ENST00000378779 SNAPC4Q5SXM2 1469 aa26.07■■□□□ 1.76
DKFZp779M0652-201ENST00000378779 MAGI1Q96QZ7 1491 aaPredicted RBP26.05■■□□□ 1.76
DKFZp779M0652-201ENST00000378779 FBLN2P98095 1184 aa26.03■■□□□ 1.76
DKFZp779M0652-201ENST00000378779 GRIN2BQ13224 1484 aa26.03■■□□□ 1.76
DKFZp779M0652-201ENST00000378779 SUPT5HO00267 1087 aaKnown RBP26.02■■□□□ 1.76
DKFZp779M0652-201ENST00000378779 PBRM1Q86U86 1689 aa26.02■■□□□ 1.76
DKFZp779M0652-201ENST00000378779 CLASP1Q7Z460 1538 aa25.99■■□□□ 1.75
DKFZp779M0652-201ENST00000378779 ABCA10Q8WWZ4 1543 aa25.97■■□□□ 1.75
DKFZp779M0652-201ENST00000378779 ARAP1Q96P48 1450 aa25.97■■□□□ 1.75
DKFZp779M0652-201ENST00000378779 ABCA5Q8WWZ7 1642 aa25.96■■□□□ 1.75
DKFZp779M0652-201ENST00000378779 SYNJ1O43426 1573 aa25.96■■□□□ 1.75
DKFZp779M0652-201ENST00000378779 SYNJ2O15056 1496 aa25.95■■□□□ 1.74
DKFZp779M0652-201ENST00000378779 GAPVD1Q14C86 1478 aa25.94■■□□□ 1.74
DKFZp779M0652-201ENST00000378779 CYB5RLQ6IPT4 315 aa25.92■■□□□ 1.74
DKFZp779M0652-201ENST00000378779 BIVM-ERCC5R4GMW8 1640 aa25.91■■□□□ 1.74
DKFZp779M0652-201ENST00000378779 CHMP7Q8WUX9 453 aaPredicted RBP25.9■■□□□ 1.74
DKFZp779M0652-201ENST00000378779 TOP2BQ02880 1626 aa25.87■■□□□ 1.73
DKFZp779M0652-201ENST00000378779 WRNQ14191 1432 aaPredicted RBP eCLIP25.82■■□□□ 1.72
DKFZp779M0652-201ENST00000378779 ADAMTS12P58397 1594 aa25.73■■□□□ 1.71
DKFZp779M0652-201ENST00000378779 GRIN2AQ12879 1464 aa25.71■■□□□ 1.71
DKFZp779M0652-201ENST00000378779 ERICH3Q5RHP9 1530 aa25.66■■□□□ 1.7
DKFZp779M0652-201ENST00000378779 NUP160Q12769 1436 aa25.64■■□□□ 1.7
DKFZp779M0652-201ENST00000378779 CEP170Q5SW79 1584 aa25.62■■□□□ 1.69
DKFZp779M0652-201ENST00000378779 FHAD1B1AJZ9 1412 aa25.62■■□□□ 1.69
DKFZp779M0652-201ENST00000378779 SHROOM2Q13796 1616 aa25.58■■□□□ 1.69
DKFZp779M0652-201ENST00000378779 TRHP20396 242 aaPredicted RBP25.57■■□□□ 1.68
DKFZp779M0652-201ENST00000378779 ERCC6L2Q5T890 1561 aa25.54■■□□□ 1.68
DKFZp779M0652-201ENST00000378779 RUSC2Q8N2Y8 1516 aa25.38■■□□□ 1.65
DKFZp779M0652-201ENST00000378779 CUL7Q14999 1698 aa25.32■■□□□ 1.64
DKFZp779M0652-201ENST00000378779 PRG4Q92954 1404 aaPredicted RBP25.31■■□□□ 1.64
DKFZp779M0652-201ENST00000378779 KIF27Q86VH2 1401 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms