RNA–Protein interactions for RNA: ENST00000495278.5

HLA-J-204, Transcript of major histocompatibility complex, class I, J (pseudogene), humanhuman

BASIC

Gene HLA-J, Length 958 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-J-204ENST00000495278 NISCHQ9Y2I1 1504 aa35.45■■■■□ 3.27
HLA-J-204ENST00000495278 CCDC180Q9P1Z9 1646 aa31.51■■■□□ 2.63
HLA-J-204ENST00000495278 ABCC9O60706 1549 aa30.69■■■□□ 2.5
HLA-J-204ENST00000495278 NACADO15069 1562 aa29.59■■■□□ 2.33
HLA-J-204ENST00000495278 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
HLA-J-204ENST00000495278 ZCCHC6Q5VYS8 1495 aaKnown RBP29.54■■■□□ 2.32
HLA-J-204ENST00000495278 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
HLA-J-204ENST00000495278 MYO15BQ96JP2 1530 aa29.46■■■□□ 2.31
HLA-J-204ENST00000495278 DCAF1Q9Y4B6 1507 aa29.36■■■□□ 2.29
HLA-J-204ENST00000495278 UNC13AQ9UPW8 1703 aa29.03■■■□□ 2.24
HLA-J-204ENST00000495278 BICRAQ9NZM4 1560 aa28.74■■■□□ 2.19
HLA-J-204ENST00000495278 SCRIBQ14160 1630 aa28.69■■■□□ 2.18
HLA-J-204ENST00000495278 PABPN1Q86U42 306 aaKnown RBP eCLIP28.68■■■□□ 2.18
HLA-J-204ENST00000495278 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
HLA-J-204ENST00000495278 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
HLA-J-204ENST00000495278 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
HLA-J-204ENST00000495278 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
HLA-J-204ENST00000495278 CECR2Q9BXF3 1484 aa27.61■■■□□ 2.01
HLA-J-204ENST00000495278 SMARCA4P51532 1647 aa27.49■■□□□ 1.99
HLA-J-204ENST00000495278 BAZ1AQ9NRL2 1556 aaPredicted RBP27.45■■□□□ 1.99
HLA-J-204ENST00000495278 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
HLA-J-204ENST00000495278 MROH2BQ7Z745 1585 aa27.32■■□□□ 1.96
HLA-J-204ENST00000495278 NCAPD3P42695 1498 aa27.31■■□□□ 1.96
HLA-J-204ENST00000495278 SMARCA2P51531 1590 aa27.28■■□□□ 1.96
HLA-J-204ENST00000495278 PEG3Q9GZU2 1588 aa27.26■■□□□ 1.95
HLA-J-204ENST00000495278 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
HLA-J-204ENST00000495278 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
HLA-J-204ENST00000495278 WIZO95785 1651 aa27.05■■□□□ 1.92
HLA-J-204ENST00000495278 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
HLA-J-204ENST00000495278 TOP2AP11388 1531 aaKnown RBP26.73■■□□□ 1.87
HLA-J-204ENST00000495278 NESP48681 1621 aa26.61■■□□□ 1.85
HLA-J-204ENST00000495278 LAMC3Q9Y6N6 1575 aa26.57■■□□□ 1.84
HLA-J-204ENST00000495278 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
HLA-J-204ENST00000495278 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
HLA-J-204ENST00000495278 ERCC6Q03468 1493 aa26.41■■□□□ 1.82
HLA-J-204ENST00000495278 CFTRP13569 1480 aa26.36■■□□□ 1.81
HLA-J-204ENST00000495278 PDS5BQ9NTI5 1447 aa26.35■■□□□ 1.81
HLA-J-204ENST00000495278 KIF21AQ7Z4S6 1674 aa26.34■■□□□ 1.81
HLA-J-204ENST00000495278 SUPT5HO00267 1087 aaKnown RBP26.32■■□□□ 1.8
HLA-J-204ENST00000495278 PRDM2Q13029 1718 aa26.25■■□□□ 1.79
HLA-J-204ENST00000495278 THOC2Q8NI27 1593 aaKnown RBP26.21■■□□□ 1.79
HLA-J-204ENST00000495278 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
HLA-J-204ENST00000495278 CUX2O14529 1486 aa26.17■■□□□ 1.78
HLA-J-204ENST00000495278 CEP164Q9UPV0 1460 aa26.12■■□□□ 1.77
HLA-J-204ENST00000495278 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
HLA-J-204ENST00000495278 WDR62O43379 1518 aa26.02■■□□□ 1.76
HLA-J-204ENST00000495278 URB2Q14146 1524 aaKnown RBP25.93■■□□□ 1.74
HLA-J-204ENST00000495278 TOPBP1Q92547 1522 aa25.78■■□□□ 1.72
HLA-J-204ENST00000495278 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
HLA-J-204ENST00000495278 DNMBPQ6XZF7 1577 aa25.76■■□□□ 1.71
HLA-J-204ENST00000495278 CUX1P39880 1505 aa25.62■■□□□ 1.69
HLA-J-204ENST00000495278 IFT140Q96RY7 1462 aa25.59■■□□□ 1.69
HLA-J-204ENST00000495278 POLA1P09884 1462 aaPredicted RBP25.56■■□□□ 1.68
HLA-J-204ENST00000495278 TARBP1Q13395 1621 aaKnown RBP25.53■■□□□ 1.68
HLA-J-204ENST00000495278 FGD5Q6ZNL6 1462 aa25.5■■□□□ 1.67
HLA-J-204ENST00000495278 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
HLA-J-204ENST00000495278 RAD54L2Q9Y4B4 1467 aa25.45■■□□□ 1.66
HLA-J-204ENST00000495278 SOGA1O94964 1423 aa25.45■■□□□ 1.66
HLA-J-204ENST00000495278 WRNQ14191 1432 aaPredicted RBP eCLIP25.45■■□□□ 1.66
HLA-J-204ENST00000495278 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.66
HLA-J-204ENST00000495278 TOP2BQ02880 1626 aa25.43■■□□□ 1.66
HLA-J-204ENST00000495278 SYNJ1O43426 1573 aa25.41■■□□□ 1.66
HLA-J-204ENST00000495278 EIF4G3O43432 1585 aaKnown RBP25.37■■□□□ 1.65
HLA-J-204ENST00000495278 WDR97A6NE52 1622 aa25.35■■□□□ 1.65
HLA-J-204ENST00000495278 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.65
HLA-J-204ENST00000495278 DNAJC5Q9H3Z4 198 aa25.3■■□□□ 1.64
HLA-J-204ENST00000495278 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
HLA-J-204ENST00000495278 ABCA10Q8WWZ4 1543 aa25.28■■□□□ 1.64
HLA-J-204ENST00000495278 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
HLA-J-204ENST00000495278 GAPVD1Q14C86 1478 aa25.15■■□□□ 1.62
HLA-J-204ENST00000495278 PBRM1Q86U86 1689 aa25.14■■□□□ 1.62
HLA-J-204ENST00000495278 GRIN2BQ13224 1484 aa25.14■■□□□ 1.61
HLA-J-204ENST00000495278 OSCARQ8IYS5 282 aa25.09■■□□□ 1.61
HLA-J-204ENST00000495278 CHD1O14646 1710 aa25.09■■□□□ 1.61
HLA-J-204ENST00000495278 SNAPC4Q5SXM2 1469 aa25.08■■□□□ 1.6
HLA-J-204ENST00000495278 MAGI1Q96QZ7 1491 aaPredicted RBP25.07■■□□□ 1.6
HLA-J-204ENST00000495278 ERICH3Q5RHP9 1530 aa24.98■■□□□ 1.59
HLA-J-204ENST00000495278 SYNJ2O15056 1496 aa24.96■■□□□ 1.59
HLA-J-204ENST00000495278 FBLN2P98095 1184 aa24.95■■□□□ 1.58
HLA-J-204ENST00000495278 CHMP7Q8WUX9 453 aaPredicted RBP24.92■■□□□ 1.58
HLA-J-204ENST00000495278 KIF27Q86VH2 1401 aa24.91■■□□□ 1.58
HLA-J-204ENST00000495278 ADAMTS12P58397 1594 aa24.91■■□□□ 1.58
HLA-J-204ENST00000495278 TRIM41Q8WV44 630 aa24.87■■□□□ 1.57
HLA-J-204ENST00000495278 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
HLA-J-204ENST00000495278 IGF1RP08069 1367 aa24.84■■□□□ 1.57
HLA-J-204ENST00000495278 GRIN2AQ12879 1464 aa24.82■■□□□ 1.56
HLA-J-204ENST00000495278 CLASP1Q7Z460 1538 aa24.79■■□□□ 1.56
HLA-J-204ENST00000495278 CUL7Q14999 1698 aa24.76■■□□□ 1.55
HLA-J-204ENST00000495278 RUSC2Q8N2Y8 1516 aa24.75■■□□□ 1.55
HLA-J-204ENST00000495278 NUP160Q12769 1436 aa24.73■■□□□ 1.55
HLA-J-204ENST00000495278 RIMBP3CA6NJZ7 1639 aa24.71■■□□□ 1.55
HLA-J-204ENST00000495278 RIMBP3BA6NNM3 1639 aa24.71■■□□□ 1.55
HLA-J-204ENST00000495278 RIMBP3Q9UFD9 1639 aa24.71■■□□□ 1.55
HLA-J-204ENST00000495278 CEP170Q5SW79 1584 aa24.71■■□□□ 1.55
HLA-J-204ENST00000495278 ARHGEF11O15085 1522 aa24.69■■□□□ 1.54
HLA-J-204ENST00000495278 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
HLA-J-204ENST00000495278 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
HLA-J-204ENST00000495278 SHROOM2Q13796 1616 aa24.57■■□□□ 1.52
HLA-J-204ENST00000495278 RAPGEF2Q9Y4G8 1499 aa24.53■■□□□ 1.52
HLA-J-204ENST00000495278 ARAP1Q96P48 1450 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms