Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PMS1P54277 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PMS1P54277 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.33■□□□□ 0.21
PMS1P54277 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
PMS1P54277 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PMS1P54277 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PMS1P54277 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PMS1P54277 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.33■□□□□ 0.2
PMS1P54277 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.33■□□□□ 0.2
PMS1P54277 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.33■□□□□ 0.2
PMS1P54277 PTP4A1P2-201ENST00000546033 454 ntBASIC16.33■□□□□ 0.2
PMS1P54277 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.33■□□□□ 0.2
PMS1P54277 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.33■□□□□ 0.2
PMS1P54277 AC103988.2-201ENST00000561804 725 ntBASIC16.33■□□□□ 0.2
PMS1P54277 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.33■□□□□ 0.2
PMS1P54277 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.33■□□□□ 0.2
PMS1P54277 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.33■□□□□ 0.2
PMS1P54277 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.33■□□□□ 0.2
PMS1P54277 FKBP4P6-201ENST00000457486 1332 ntBASIC16.33■□□□□ 0.2
PMS1P54277 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PMS1P54277 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PMS1P54277 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.33■□□□□ 0.2
PMS1P54277 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.33■□□□□ 0.2
PMS1P54277 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PMS1P54277 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PMS1P54277 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.32■□□□□ 0.2
PMS1P54277 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.32■□□□□ 0.2
PMS1P54277 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PMS1P54277 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PMS1P54277 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.32■□□□□ 0.2
PMS1P54277 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.32■□□□□ 0.2
PMS1P54277 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.32■□□□□ 0.2
PMS1P54277 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PMS1P54277 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.32■□□□□ 0.2
PMS1P54277 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.32■□□□□ 0.2
PMS1P54277 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.32■□□□□ 0.2
PMS1P54277 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.32■□□□□ 0.2
PMS1P54277 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.32■□□□□ 0.2
PMS1P54277 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.32■□□□□ 0.2
PMS1P54277 AC020910.6-201ENST00000623084 1459 ntBASIC16.32■□□□□ 0.2
PMS1P54277 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PMS1P54277 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.32■□□□□ 0.2
PMS1P54277 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMS1P54277 PCDHA3-202ENST00000532566 4594 ntBASIC16.31■□□□□ 0.2
PMS1P54277 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PMS1P54277 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.31■□□□□ 0.2
PMS1P54277 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 AC139712.1-201ENST00000378256 1875 ntBASIC16.31■□□□□ 0.2
PMS1P54277 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
PMS1P54277 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PMS1P54277 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.31■□□□□ 0.2
PMS1P54277 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.31■□□□□ 0.2
PMS1P54277 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms