RNA–Protein interactions for RNA: ENST00000511148.2

CLRN2-201, Transcript of clarin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN2, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2-201ENST00000511148 NISCHQ9Y2I1 1504 aa36.5■■■■□ 3.43
CLRN2-201ENST00000511148 CCDC180Q9P1Z9 1646 aa32.66■■■□□ 2.82
CLRN2-201ENST00000511148 ABCC9O60706 1549 aa32.37■■■□□ 2.77
CLRN2-201ENST00000511148 RB1CC1Q8TDY2 1594 aa30.98■■■□□ 2.55
CLRN2-201ENST00000511148 NACADO15069 1562 aa30.83■■■□□ 2.53
CLRN2-201ENST00000511148 DCAF8L2P0C7V8 631 aa30.73■■■□□ 2.51
CLRN2-201ENST00000511148 MYO15BQ96JP2 1530 aa30.52■■■□□ 2.48
CLRN2-201ENST00000511148 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
CLRN2-201ENST00000511148 DCAF1Q9Y4B6 1507 aa30.2■■■□□ 2.42
CLRN2-201ENST00000511148 PABPN1Q86U42 306 aaKnown RBP eCLIP30.17■■■□□ 2.42
CLRN2-201ENST00000511148 UNC13AQ9UPW8 1703 aa30.15■■■□□ 2.42
CLRN2-201ENST00000511148 DNAJC5BQ9UF47 199 aa30.06■■■□□ 2.4
CLRN2-201ENST00000511148 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
CLRN2-201ENST00000511148 SCRIBQ14160 1630 aa29.74■■■□□ 2.35
CLRN2-201ENST00000511148 SHROOM4Q9ULL8 1493 aa29.74■■■□□ 2.35
CLRN2-201ENST00000511148 EIF4G1Q04637 1599 aaKnown RBP29.27■■■□□ 2.28
CLRN2-201ENST00000511148 CC2D2AQ9P2K1 1620 aa29.25■■■□□ 2.27
CLRN2-201ENST00000511148 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
CLRN2-201ENST00000511148 NCAPD3P42695 1498 aa28.45■■■□□ 2.14
CLRN2-201ENST00000511148 SMARCA4P51532 1647 aa28.41■■■□□ 2.14
CLRN2-201ENST00000511148 ATAD2BQ9ULI0 1458 aa28.38■■■□□ 2.13
CLRN2-201ENST00000511148 SMARCA2P51531 1590 aa28.36■■■□□ 2.13
CLRN2-201ENST00000511148 BAZ1AQ9NRL2 1556 aaPredicted RBP28.36■■■□□ 2.13
CLRN2-201ENST00000511148 HMGXB3Q12766 1538 aa28.27■■■□□ 2.12
CLRN2-201ENST00000511148 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
CLRN2-201ENST00000511148 PEG3Q9GZU2 1588 aa28.15■■■□□ 2.1
CLRN2-201ENST00000511148 MROH2BQ7Z745 1585 aa28.1■■■□□ 2.09
CLRN2-201ENST00000511148 ERCC6Q03468 1493 aa28■■■□□ 2.07
CLRN2-201ENST00000511148 NESP48681 1621 aa27.85■■■□□ 2.05
CLRN2-201ENST00000511148 CUX2O14529 1486 aa27.85■■■□□ 2.05
CLRN2-201ENST00000511148 WIZO95785 1651 aa27.8■■■□□ 2.04
CLRN2-201ENST00000511148 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
CLRN2-201ENST00000511148 RSF1Q96T23 1441 aaPredicted RBP27.77■■■□□ 2.04
CLRN2-201ENST00000511148 PDS5BQ9NTI5 1447 aa27.64■■■□□ 2.02
CLRN2-201ENST00000511148 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
CLRN2-201ENST00000511148 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
CLRN2-201ENST00000511148 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
CLRN2-201ENST00000511148 DNAJC5Q9H3Z4 198 aa27.49■■□□□ 1.99
CLRN2-201ENST00000511148 TOP2AP11388 1531 aaKnown RBP27.49■■□□□ 1.99
CLRN2-201ENST00000511148 MRC2Q9UBG0 1479 aa27.35■■□□□ 1.97
CLRN2-201ENST00000511148 CFTRP13569 1480 aa27.33■■□□□ 1.97
CLRN2-201ENST00000511148 SUPT5HO00267 1087 aaKnown RBP27.32■■□□□ 1.96
CLRN2-201ENST00000511148 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
CLRN2-201ENST00000511148 FANCD2Q9BXW9 1451 aa27.28■■□□□ 1.96
CLRN2-201ENST00000511148 WDR62O43379 1518 aa27.26■■□□□ 1.96
CLRN2-201ENST00000511148 CCDC88BA6NC98 1476 aa27.18■■□□□ 1.94
CLRN2-201ENST00000511148 PRDM2Q13029 1718 aa27.04■■□□□ 1.92
CLRN2-201ENST00000511148 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
CLRN2-201ENST00000511148 ABCC8Q09428 1581 aa26.81■■□□□ 1.88
CLRN2-201ENST00000511148 TOPBP1Q92547 1522 aa26.78■■□□□ 1.88
CLRN2-201ENST00000511148 IFT140Q96RY7 1462 aa26.75■■□□□ 1.87
CLRN2-201ENST00000511148 DNMBPQ6XZF7 1577 aa26.72■■□□□ 1.87
CLRN2-201ENST00000511148 OSCARQ8IYS5 282 aa26.63■■□□□ 1.85
CLRN2-201ENST00000511148 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
CLRN2-201ENST00000511148 POLA1P09884 1462 aaPredicted RBP26.53■■□□□ 1.84
CLRN2-201ENST00000511148 EIF4G3O43432 1585 aaKnown RBP26.51■■□□□ 1.83
CLRN2-201ENST00000511148 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
CLRN2-201ENST00000511148 SOGA1O94964 1423 aa26.43■■□□□ 1.82
CLRN2-201ENST00000511148 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.82
CLRN2-201ENST00000511148 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
CLRN2-201ENST00000511148 FGD5Q6ZNL6 1462 aa26.4■■□□□ 1.82
CLRN2-201ENST00000511148 RAD54L2Q9Y4B4 1467 aa26.39■■□□□ 1.82
CLRN2-201ENST00000511148 CUX1P39880 1505 aa26.39■■□□□ 1.81
CLRN2-201ENST00000511148 WDR97A6NE52 1622 aa26.33■■□□□ 1.81
CLRN2-201ENST00000511148 TDRD9Q8NDG6 1382 aaKnown RBP26.32■■□□□ 1.8
CLRN2-201ENST00000511148 FBLN2P98095 1184 aa26.26■■□□□ 1.79
CLRN2-201ENST00000511148 WRNQ14191 1432 aaPredicted RBP eCLIP26.22■■□□□ 1.79
CLRN2-201ENST00000511148 CHD1O14646 1710 aa26.22■■□□□ 1.79
CLRN2-201ENST00000511148 SNAPC4Q5SXM2 1469 aa26.19■■□□□ 1.78
CLRN2-201ENST00000511148 GRIN2BQ13224 1484 aa26.18■■□□□ 1.78
CLRN2-201ENST00000511148 RIMBP3CA6NJZ7 1639 aa26.18■■□□□ 1.78
CLRN2-201ENST00000511148 RIMBP3BA6NNM3 1639 aa26.18■■□□□ 1.78
CLRN2-201ENST00000511148 RIMBP3Q9UFD9 1639 aa26.18■■□□□ 1.78
CLRN2-201ENST00000511148 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
CLRN2-201ENST00000511148 ARHGEF11O15085 1522 aa26.15■■□□□ 1.78
CLRN2-201ENST00000511148 ABCA10Q8WWZ4 1543 aa26.13■■□□□ 1.77
CLRN2-201ENST00000511148 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
CLRN2-201ENST00000511148 CHMP7Q8WUX9 453 aaPredicted RBP26.12■■□□□ 1.77
CLRN2-201ENST00000511148 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
CLRN2-201ENST00000511148 TOP2BQ02880 1626 aa26.11■■□□□ 1.77
CLRN2-201ENST00000511148 BIVM-ERCC5R4GMW8 1640 aa26.1■■□□□ 1.77
CLRN2-201ENST00000511148 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
CLRN2-201ENST00000511148 ABCA5Q8WWZ7 1642 aa26.04■■□□□ 1.76
CLRN2-201ENST00000511148 PBRM1Q86U86 1689 aa26.04■■□□□ 1.76
CLRN2-201ENST00000511148 CYB5RLQ6IPT4 315 aa25.96■■□□□ 1.75
CLRN2-201ENST00000511148 CLASP1Q7Z460 1538 aa25.96■■□□□ 1.75
CLRN2-201ENST00000511148 ARAP1Q96P48 1450 aa25.9■■□□□ 1.74
CLRN2-201ENST00000511148 ADAMTS12P58397 1594 aa25.83■■□□□ 1.73
CLRN2-201ENST00000511148 GRIN2AQ12879 1464 aa25.83■■□□□ 1.73
CLRN2-201ENST00000511148 ERICH3Q5RHP9 1530 aa25.82■■□□□ 1.72
CLRN2-201ENST00000511148 FHAD1B1AJZ9 1412 aa25.81■■□□□ 1.72
CLRN2-201ENST00000511148 NUP160Q12769 1436 aa25.72■■□□□ 1.71
CLRN2-201ENST00000511148 KIF27Q86VH2 1401 aa25.69■■□□□ 1.7
CLRN2-201ENST00000511148 CEP170Q5SW79 1584 aa25.69■■□□□ 1.7
CLRN2-201ENST00000511148 TRHP20396 242 aaPredicted RBP25.62■■□□□ 1.69
CLRN2-201ENST00000511148 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
CLRN2-201ENST00000511148 IGF1RP08069 1367 aa25.54■■□□□ 1.68
CLRN2-201ENST00000511148 ERCC6L2Q5T890 1561 aa25.52■■□□□ 1.68
CLRN2-201ENST00000511148 CUL7Q14999 1698 aa25.49■■□□□ 1.67
CLRN2-201ENST00000511148 JPH4Q96JJ6 628 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms