RNA–Protein interactions for RNA: ENST00000567742.1

AP000439.4-201, humanhuman

TSL 3 BASIC

Gene AP000439.4, Length 664 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.4-201ENST00000567742 NISCHQ9Y2I1 1504 aa36.58■■■■□ 3.45
AP000439.4-201ENST00000567742 CCDC180Q9P1Z9 1646 aa32.59■■■□□ 2.81
AP000439.4-201ENST00000567742 ABCC9O60706 1549 aa31.55■■■□□ 2.64
AP000439.4-201ENST00000567742 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
AP000439.4-201ENST00000567742 NACADO15069 1562 aa30.53■■■□□ 2.48
AP000439.4-201ENST00000567742 ZCCHC6Q5VYS8 1495 aaKnown RBP30.51■■■□□ 2.48
AP000439.4-201ENST00000567742 DCAF8L2P0C7V8 631 aa30.4■■■□□ 2.46
AP000439.4-201ENST00000567742 MYO15BQ96JP2 1530 aa30.4■■■□□ 2.46
AP000439.4-201ENST00000567742 DCAF1Q9Y4B6 1507 aa30.32■■■□□ 2.44
AP000439.4-201ENST00000567742 UNC13AQ9UPW8 1703 aa29.94■■■□□ 2.38
AP000439.4-201ENST00000567742 SCRIBQ14160 1630 aa29.63■■■□□ 2.33
AP000439.4-201ENST00000567742 BICRAQ9NZM4 1560 aa29.55■■■□□ 2.32
AP000439.4-201ENST00000567742 PABPN1Q86U42 306 aaKnown RBP eCLIP29.44■■■□□ 2.3
AP000439.4-201ENST00000567742 SHROOM4Q9ULL8 1493 aa29.32■■■□□ 2.28
AP000439.4-201ENST00000567742 EIF4G1Q04637 1599 aaKnown RBP28.78■■■□□ 2.2
AP000439.4-201ENST00000567742 DNAJC5BQ9UF47 199 aa28.72■■■□□ 2.19
AP000439.4-201ENST00000567742 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
AP000439.4-201ENST00000567742 CECR2Q9BXF3 1484 aa28.41■■■□□ 2.14
AP000439.4-201ENST00000567742 SMARCA4P51532 1647 aa28.4■■■□□ 2.14
AP000439.4-201ENST00000567742 BAZ1AQ9NRL2 1556 aaPredicted RBP28.38■■■□□ 2.13
AP000439.4-201ENST00000567742 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
AP000439.4-201ENST00000567742 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
AP000439.4-201ENST00000567742 ATAD2BQ9ULI0 1458 aa28.14■■■□□ 2.09
AP000439.4-201ENST00000567742 PEG3Q9GZU2 1588 aa28.13■■■□□ 2.09
AP000439.4-201ENST00000567742 NCAPD3P42695 1498 aa28.1■■■□□ 2.09
AP000439.4-201ENST00000567742 HMGXB3Q12766 1538 aa28.04■■■□□ 2.08
AP000439.4-201ENST00000567742 BAZ1BQ9UIG0 1483 aaKnown RBP27.94■■■□□ 2.06
AP000439.4-201ENST00000567742 WIZO95785 1651 aa27.94■■■□□ 2.06
AP000439.4-201ENST00000567742 RSF1Q96T23 1441 aaPredicted RBP27.87■■■□□ 2.05
AP000439.4-201ENST00000567742 TOP2AP11388 1531 aaKnown RBP27.64■■■□□ 2.02
AP000439.4-201ENST00000567742 LAMC3Q9Y6N6 1575 aa27.42■■□□□ 1.98
AP000439.4-201ENST00000567742 NESP48681 1621 aa27.34■■□□□ 1.97
AP000439.4-201ENST00000567742 CADPSQ9ULU8 1353 aa27.27■■□□□ 1.96
AP000439.4-201ENST00000567742 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
AP000439.4-201ENST00000567742 SUPT5HO00267 1087 aaKnown RBP27.23■■□□□ 1.95
AP000439.4-201ENST00000567742 ERCC6Q03468 1493 aa27.23■■□□□ 1.95
AP000439.4-201ENST00000567742 PRDM2Q13029 1718 aa27.2■■□□□ 1.94
AP000439.4-201ENST00000567742 KIF21AQ7Z4S6 1674 aa27.17■■□□□ 1.94
AP000439.4-201ENST00000567742 PDS5BQ9NTI5 1447 aa27.16■■□□□ 1.94
AP000439.4-201ENST00000567742 CFTRP13569 1480 aa27.16■■□□□ 1.94
AP000439.4-201ENST00000567742 THOC2Q8NI27 1593 aaKnown RBP27.01■■□□□ 1.91
AP000439.4-201ENST00000567742 FANCD2Q9BXW9 1451 aa26.98■■□□□ 1.91
AP000439.4-201ENST00000567742 CEP164Q9UPV0 1460 aa26.95■■□□□ 1.91
AP000439.4-201ENST00000567742 CUX2O14529 1486 aa26.92■■□□□ 1.9
AP000439.4-201ENST00000567742 MRC2Q9UBG0 1479 aa26.87■■□□□ 1.89
AP000439.4-201ENST00000567742 WDR62O43379 1518 aa26.81■■□□□ 1.88
AP000439.4-201ENST00000567742 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
AP000439.4-201ENST00000567742 ABCC8Q09428 1581 aa26.64■■□□□ 1.86
AP000439.4-201ENST00000567742 DNMBPQ6XZF7 1577 aa26.6■■□□□ 1.85
AP000439.4-201ENST00000567742 TOPBP1Q92547 1522 aa26.58■■□□□ 1.85
AP000439.4-201ENST00000567742 CUX1P39880 1505 aa26.42■■□□□ 1.82
AP000439.4-201ENST00000567742 IFT140Q96RY7 1462 aa26.38■■□□□ 1.81
AP000439.4-201ENST00000567742 POLA1P09884 1462 aaPredicted RBP26.35■■□□□ 1.81
AP000439.4-201ENST00000567742 BIVM-ERCC5R4GMW8 1640 aa26.33■■□□□ 1.81
AP000439.4-201ENST00000567742 FGD5Q6ZNL6 1462 aa26.32■■□□□ 1.8
AP000439.4-201ENST00000567742 TARBP1Q13395 1621 aaKnown RBP26.31■■□□□ 1.8
AP000439.4-201ENST00000567742 WRNQ14191 1432 aaPredicted RBP eCLIP26.31■■□□□ 1.8
AP000439.4-201ENST00000567742 TOP2BQ02880 1626 aa26.29■■□□□ 1.8
AP000439.4-201ENST00000567742 SYNJ1O43426 1573 aa26.26■■□□□ 1.79
AP000439.4-201ENST00000567742 SOGA1O94964 1423 aa26.22■■□□□ 1.79
AP000439.4-201ENST00000567742 WDR97A6NE52 1622 aa26.21■■□□□ 1.79
AP000439.4-201ENST00000567742 RAD54L2Q9Y4B4 1467 aa26.2■■□□□ 1.78
AP000439.4-201ENST00000567742 EIF4G3O43432 1585 aaKnown RBP26.2■■□□□ 1.78
AP000439.4-201ENST00000567742 ZNF608Q9ULD9 1512 aaPredicted RBP26.19■■□□□ 1.78
AP000439.4-201ENST00000567742 ABCA10Q8WWZ4 1543 aa26.09■■□□□ 1.77
AP000439.4-201ENST00000567742 AQRO60306 1485 aaKnown RBP eCLIP26.06■■□□□ 1.76
AP000439.4-201ENST00000567742 TDRD9Q8NDG6 1382 aaKnown RBP26.02■■□□□ 1.76
AP000439.4-201ENST00000567742 PBRM1Q86U86 1689 aa26.02■■□□□ 1.76
AP000439.4-201ENST00000567742 ABCA5Q8WWZ7 1642 aa26.01■■□□□ 1.75
AP000439.4-201ENST00000567742 GAPVD1Q14C86 1478 aa25.96■■□□□ 1.75
AP000439.4-201ENST00000567742 GRIN2BQ13224 1484 aa25.93■■□□□ 1.74
AP000439.4-201ENST00000567742 CHD1O14646 1710 aa25.89■■□□□ 1.74
AP000439.4-201ENST00000567742 MAGI1Q96QZ7 1491 aaPredicted RBP25.87■■□□□ 1.73
AP000439.4-201ENST00000567742 SNAPC4Q5SXM2 1469 aa25.86■■□□□ 1.73
AP000439.4-201ENST00000567742 DNAJC5Q9H3Z4 198 aa25.81■■□□□ 1.72
AP000439.4-201ENST00000567742 ERICH3Q5RHP9 1530 aa25.81■■□□□ 1.72
AP000439.4-201ENST00000567742 OSCARQ8IYS5 282 aa25.76■■□□□ 1.71
AP000439.4-201ENST00000567742 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
AP000439.4-201ENST00000567742 KIF27Q86VH2 1401 aa25.76■■□□□ 1.71
AP000439.4-201ENST00000567742 SYNJ2O15056 1496 aa25.75■■□□□ 1.71
AP000439.4-201ENST00000567742 ADAMTS12P58397 1594 aa25.74■■□□□ 1.71
AP000439.4-201ENST00000567742 FBLN2P98095 1184 aa25.7■■□□□ 1.7
AP000439.4-201ENST00000567742 CHMP7Q8WUX9 453 aaPredicted RBP25.68■■□□□ 1.7
AP000439.4-201ENST00000567742 CUL7Q14999 1698 aa25.66■■□□□ 1.7
AP000439.4-201ENST00000567742 FHAD1B1AJZ9 1412 aa25.65■■□□□ 1.7
AP000439.4-201ENST00000567742 GRIN2AQ12879 1464 aa25.6■■□□□ 1.69
AP000439.4-201ENST00000567742 IGF1RP08069 1367 aa25.57■■□□□ 1.68
AP000439.4-201ENST00000567742 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
AP000439.4-201ENST00000567742 RUSC2Q8N2Y8 1516 aa25.52■■□□□ 1.68
AP000439.4-201ENST00000567742 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
AP000439.4-201ENST00000567742 CEP170Q5SW79 1584 aa25.48■■□□□ 1.67
AP000439.4-201ENST00000567742 NUP160Q12769 1436 aa25.47■■□□□ 1.67
AP000439.4-201ENST00000567742 CARMIL1Q5VZK9 1371 aa25.46■■□□□ 1.67
AP000439.4-201ENST00000567742 RIMBP3CA6NJZ7 1639 aa25.41■■□□□ 1.66
AP000439.4-201ENST00000567742 RIMBP3BA6NNM3 1639 aa25.41■■□□□ 1.66
AP000439.4-201ENST00000567742 RIMBP3Q9UFD9 1639 aa25.41■■□□□ 1.66
AP000439.4-201ENST00000567742 EEA1Q15075 1411 aa25.4■■□□□ 1.66
AP000439.4-201ENST00000567742 ARHGEF11O15085 1522 aa25.38■■□□□ 1.65
AP000439.4-201ENST00000567742 RAPGEF2Q9Y4G8 1499 aa25.36■■□□□ 1.65
AP000439.4-201ENST00000567742 SHROOM2Q13796 1616 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms