RNA–Protein interactions for RNA: ENST00000397472.6

GATD1-203, Transcript of glutamine amidotransferase like class 1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GATD1, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATD1-203ENST00000397472 NISCHQ9Y2I1 1504 aa35.74■■■■□ 3.31
GATD1-203ENST00000397472 CCDC180Q9P1Z9 1646 aa31.98■■■□□ 2.71
GATD1-203ENST00000397472 ABCC9O60706 1549 aa31.49■■■□□ 2.63
GATD1-203ENST00000397472 RB1CC1Q8TDY2 1594 aa30.19■■■□□ 2.42
GATD1-203ENST00000397472 NACADO15069 1562 aa30.05■■■□□ 2.4
GATD1-203ENST00000397472 DCAF8L2P0C7V8 631 aa30.02■■■□□ 2.4
GATD1-203ENST00000397472 ZCCHC6Q5VYS8 1495 aaKnown RBP29.74■■■□□ 2.35
GATD1-203ENST00000397472 MYO15BQ96JP2 1530 aa29.7■■■□□ 2.34
GATD1-203ENST00000397472 UNC13AQ9UPW8 1703 aa29.61■■■□□ 2.33
GATD1-203ENST00000397472 DCAF1Q9Y4B6 1507 aa29.52■■■□□ 2.32
GATD1-203ENST00000397472 PABPN1Q86U42 306 aaKnown RBP eCLIP29.33■■■□□ 2.291e-6■■■□□ 18.8
GATD1-203ENST00000397472 BICRAQ9NZM4 1560 aa29.24■■■□□ 2.27
GATD1-203ENST00000397472 SCRIBQ14160 1630 aa29.2■■■□□ 2.27
GATD1-203ENST00000397472 DNAJC5BQ9UF47 199 aa28.97■■■□□ 2.23
GATD1-203ENST00000397472 SHROOM4Q9ULL8 1493 aa28.86■■■□□ 2.21
GATD1-203ENST00000397472 EIF4G1Q04637 1599 aaKnown RBP28.53■■■□□ 2.16
GATD1-203ENST00000397472 CC2D2AQ9P2K1 1620 aa28.49■■■□□ 2.15
GATD1-203ENST00000397472 CECR2Q9BXF3 1484 aa28.29■■■□□ 2.12
GATD1-203ENST00000397472 SMARCA4P51532 1647 aa27.86■■■□□ 2.05
GATD1-203ENST00000397472 BAZ1AQ9NRL2 1556 aaPredicted RBP27.76■■■□□ 2.03
GATD1-203ENST00000397472 SMARCA2P51531 1590 aa27.69■■■□□ 2.02
GATD1-203ENST00000397472 ATAD2BQ9ULI0 1458 aa27.68■■■□□ 2.02
GATD1-203ENST00000397472 NCAPD3P42695 1498 aa27.65■■■□□ 2.02
GATD1-203ENST00000397472 HMGXB3Q12766 1538 aa27.58■■■□□ 2.01
GATD1-203ENST00000397472 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
GATD1-203ENST00000397472 BAZ1BQ9UIG0 1483 aaKnown RBP27.51■■■□□ 2
GATD1-203ENST00000397472 PEG3Q9GZU2 1588 aa27.51■■□□□ 1.99
GATD1-203ENST00000397472 WIZO95785 1651 aa27.33■■□□□ 1.97
GATD1-203ENST00000397472 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
GATD1-203ENST00000397472 NESP48681 1621 aa27.16■■□□□ 1.94
GATD1-203ENST00000397472 RSF1Q96T23 1441 aaPredicted RBP27.11■■□□□ 1.93
GATD1-203ENST00000397472 LAMC3Q9Y6N6 1575 aa27.07■■□□□ 1.92
GATD1-203ENST00000397472 TOP2AP11388 1531 aaKnown RBP26.98■■□□□ 1.91
GATD1-203ENST00000397472 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.91
GATD1-203ENST00000397472 CUX2O14529 1486 aa26.91■■□□□ 1.9
GATD1-203ENST00000397472 CADPSQ9ULU8 1353 aa26.85■■□□□ 1.89
GATD1-203ENST00000397472 PDS5BQ9NTI5 1447 aa26.85■■□□□ 1.89
GATD1-203ENST00000397472 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
GATD1-203ENST00000397472 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
GATD1-203ENST00000397472 CFTRP13569 1480 aa26.66■■□□□ 1.86
GATD1-203ENST00000397472 PRDM2Q13029 1718 aa26.65■■□□□ 1.86
GATD1-203ENST00000397472 CEP164Q9UPV0 1460 aa26.63■■□□□ 1.85
GATD1-203ENST00000397472 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
GATD1-203ENST00000397472 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
GATD1-203ENST00000397472 FANCD2Q9BXW9 1451 aa26.62■■□□□ 1.85
GATD1-203ENST00000397472 WDR62O43379 1518 aa26.55■■□□□ 1.84
GATD1-203ENST00000397472 URB2Q14146 1524 aaKnown RBP26.36■■□□□ 1.81
GATD1-203ENST00000397472 DNAJC5Q9H3Z4 198 aa26.28■■□□□ 1.8
GATD1-203ENST00000397472 TOPBP1Q92547 1522 aa26.16■■□□□ 1.78
GATD1-203ENST00000397472 DNMBPQ6XZF7 1577 aa26.15■■□□□ 1.78
GATD1-203ENST00000397472 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
GATD1-203ENST00000397472 IFT140Q96RY7 1462 aa26.04■■□□□ 1.76
GATD1-203ENST00000397472 ZNF608Q9ULD9 1512 aaPredicted RBP25.96■■□□□ 1.75
GATD1-203ENST00000397472 EIF4G3O43432 1585 aaKnown RBP25.93■■□□□ 1.74
GATD1-203ENST00000397472 POLA1P09884 1462 aaPredicted RBP25.92■■□□□ 1.74
GATD1-203ENST00000397472 TARBP1Q13395 1621 aaKnown RBP25.92■■□□□ 1.74
GATD1-203ENST00000397472 CUX1P39880 1505 aa25.88■■□□□ 1.73
GATD1-203ENST00000397472 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
GATD1-203ENST00000397472 RAD54L2Q9Y4B4 1467 aa25.82■■□□□ 1.72
GATD1-203ENST00000397472 SOGA1O94964 1423 aa25.78■■□□□ 1.72
GATD1-203ENST00000397472 AQRO60306 1485 aaKnown RBP eCLIP25.77■■□□□ 1.722e-6■■■■□ 26.7
GATD1-203ENST00000397472 WDR97A6NE52 1622 aa25.71■■□□□ 1.71
GATD1-203ENST00000397472 OSCARQ8IYS5 282 aa25.71■■□□□ 1.71
GATD1-203ENST00000397472 CHD1O14646 1710 aa25.71■■□□□ 1.71
GATD1-203ENST00000397472 TDRD9Q8NDG6 1382 aaKnown RBP25.68■■□□□ 1.7
GATD1-203ENST00000397472 BIVM-ERCC5R4GMW8 1640 aa25.65■■□□□ 1.7
GATD1-203ENST00000397472 SYNJ1O43426 1573 aa25.63■■□□□ 1.69
GATD1-203ENST00000397472 TOP2BQ02880 1626 aa25.62■■□□□ 1.69
GATD1-203ENST00000397472 WRNQ14191 1432 aaPredicted RBP eCLIP25.62■■□□□ 1.695e-6■□□□□ 8.4
GATD1-203ENST00000397472 PBRM1Q86U86 1689 aa25.61■■□□□ 1.69
GATD1-203ENST00000397472 SNAPC4Q5SXM2 1469 aa25.57■■□□□ 1.68
GATD1-203ENST00000397472 FBLN2P98095 1184 aa25.56■■□□□ 1.68
GATD1-203ENST00000397472 ABCA10Q8WWZ4 1543 aa25.53■■□□□ 1.68
GATD1-203ENST00000397472 GRIN2BQ13224 1484 aa25.53■■□□□ 1.68
GATD1-203ENST00000397472 ABCA5Q8WWZ7 1642 aa25.52■■□□□ 1.68
GATD1-203ENST00000397472 GAPVD1Q14C86 1478 aa25.52■■□□□ 1.68
GATD1-203ENST00000397472 MAGI1Q96QZ7 1491 aaPredicted RBP25.49■■□□□ 1.67
GATD1-203ENST00000397472 TRIM41Q8WV44 630 aa25.47■■□□□ 1.67
GATD1-203ENST00000397472 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.66
GATD1-203ENST00000397472 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.66
GATD1-203ENST00000397472 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.66
GATD1-203ENST00000397472 SYNJ2O15056 1496 aa25.4■■□□□ 1.66
GATD1-203ENST00000397472 CHMP7Q8WUX9 453 aaPredicted RBP25.39■■□□□ 1.66
GATD1-203ENST00000397472 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
GATD1-203ENST00000397472 ADAMTS12P58397 1594 aa25.31■■□□□ 1.64
GATD1-203ENST00000397472 CLASP1Q7Z460 1538 aa25.29■■□□□ 1.64
GATD1-203ENST00000397472 CHIC1Q5VXU3 224 aa25.26■■□□□ 1.63
GATD1-203ENST00000397472 ERICH3Q5RHP9 1530 aa25.26■■□□□ 1.63
GATD1-203ENST00000397472 GRIN2AQ12879 1464 aa25.21■■□□□ 1.63
GATD1-203ENST00000397472 FHAD1B1AJZ9 1412 aa25.18■■□□□ 1.62
GATD1-203ENST00000397472 ARAP1Q96P48 1450 aa25.14■■□□□ 1.61
GATD1-203ENST00000397472 CEP170Q5SW79 1584 aa25.14■■□□□ 1.61
GATD1-203ENST00000397472 CYB5RLQ6IPT4 315 aa25.11■■□□□ 1.61
GATD1-203ENST00000397472 KIF27Q86VH2 1401 aa25.1■■□□□ 1.61
GATD1-203ENST00000397472 NUP160Q12769 1436 aa25.07■■□□□ 1.6
GATD1-203ENST00000397472 CUL7Q14999 1698 aa25.06■■□□□ 1.6
GATD1-203ENST00000397472 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
GATD1-203ENST00000397472 RUSC2Q8N2Y8 1516 aa24.96■■□□□ 1.59
GATD1-203ENST00000397472 ERCC6L2Q5T890 1561 aa24.95■■□□□ 1.58
GATD1-203ENST00000397472 IGF1RP08069 1367 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms