RNA–Protein interactions for RNA: ENST00000396865.6

SLC38A9-202, Transcript of solute carrier family 38 member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A9, Length 2,927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-202ENST00000396865 NISCHQ9Y2I1 1504 aa28.19■■■□□ 2.1
SLC38A9-202ENST00000396865 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.57
SLC38A9-202ENST00000396865 SUPT5HO00267 1087 aaKnown RBP24.71■■□□□ 1.55
SLC38A9-202ENST00000396865 HRCP23327 699 aa24.55■■□□□ 1.52
SLC38A9-202ENST00000396865 CCDC180Q9P1Z9 1646 aa24.33■■□□□ 1.49
SLC38A9-202ENST00000396865 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
SLC38A9-202ENST00000396865 PPARGC1BQ86YN6 1023 aaKnown RBP24.27■■□□□ 1.48
SLC38A9-202ENST00000396865 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.45
SLC38A9-202ENST00000396865 CHIC1Q5VXU3 224 aa24.06■■□□□ 1.44
SLC38A9-202ENST00000396865 ZCCHC6Q5VYS8 1495 aaKnown RBP23.69■■□□□ 1.38
SLC38A9-202ENST00000396865 LOC105371045A0A1W2PR82 267 aa23.66■■□□□ 1.38
SLC38A9-202ENST00000396865 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
SLC38A9-202ENST00000396865 DCAF1Q9Y4B6 1507 aa23.42■■□□□ 1.34
SLC38A9-202ENST00000396865 TRIM26Q12899 539 aaPredicted RBP23.4■■□□□ 1.34
SLC38A9-202ENST00000396865 PELP1Q8IZL8 1130 aaKnown RBP23.32■■□□□ 1.32
SLC38A9-202ENST00000396865 ABCC9O60706 1549 aa23.24■■□□□ 1.31
SLC38A9-202ENST00000396865 SCAF1Q9H7N4 1312 aaKnown RBP23.22■■□□□ 1.31
SLC38A9-202ENST00000396865 ZEB1P37275 1124 aaPredicted RBP23.08■■□□□ 1.29
SLC38A9-202ENST00000396865 EHMT2Q96KQ7 1210 aa22.97■■□□□ 1.27
SLC38A9-202ENST00000396865 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
SLC38A9-202ENST00000396865 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
SLC38A9-202ENST00000396865 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
SLC38A9-202ENST00000396865 NEUROD1Q13562 356 aa22.68■■□□□ 1.22
SLC38A9-202ENST00000396865 NACADO15069 1562 aa22.66■■□□□ 1.22
SLC38A9-202ENST00000396865 ACIN1Q9UKV3 1341 aaKnown RBP22.65■■□□□ 1.22
SLC38A9-202ENST00000396865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
SLC38A9-202ENST00000396865 GTF3C3Q9Y5Q9 886 aa22.56■■□□□ 1.2
SLC38A9-202ENST00000396865 CCER1Q8TC90 406 aaPredicted RBP22.52■■□□□ 1.2
SLC38A9-202ENST00000396865 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
SLC38A9-202ENST00000396865 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
SLC38A9-202ENST00000396865 CENPBP07199 599 aaPredicted RBP22.4■■□□□ 1.18
SLC38A9-202ENST00000396865 TTBK1Q5TCY1 1321 aaPredicted RBP22.36■■□□□ 1.17
SLC38A9-202ENST00000396865 RSF1Q96T23 1441 aaPredicted RBP22.32■■□□□ 1.16
SLC38A9-202ENST00000396865 MYT1Q01538 1121 aa22.3■■□□□ 1.16
SLC38A9-202ENST00000396865 YTHDC1Q96MU7 727 aaKnown RBP22.23■■□□□ 1.15
SLC38A9-202ENST00000396865 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
SLC38A9-202ENST00000396865 CECR2Q9BXF3 1484 aa22.08■■□□□ 1.12
SLC38A9-202ENST00000396865 PABPN1Q86U42 306 aaKnown RBP eCLIP22.06■■□□□ 1.12
SLC38A9-202ENST00000396865 ZNF316A6NFI3 1004 aaPredicted RBP21.96■■□□□ 1.11
SLC38A9-202ENST00000396865 BICRAQ9NZM4 1560 aa21.93■■□□□ 1.1
SLC38A9-202ENST00000396865 MROH2BQ7Z745 1585 aa21.9■■□□□ 1.1
SLC38A9-202ENST00000396865 MIER1Q8N108 512 aa21.88■■□□□ 1.09
SLC38A9-202ENST00000396865 WIZO95785 1651 aa21.76■■□□□ 1.07
SLC38A9-202ENST00000396865 HNRNPUL2Q1KMD3 747 aaKnown RBP21.71■■□□□ 1.07
SLC38A9-202ENST00000396865 BAZ1AQ9NRL2 1556 aaPredicted RBP21.69■■□□□ 1.06
SLC38A9-202ENST00000396865 CEP162Q5TB80 1403 aa21.67■■□□□ 1.06
SLC38A9-202ENST00000396865 UBTFP17480 764 aaKnown RBP21.67■■□□□ 1.06
SLC38A9-202ENST00000396865 SMARCA4P51532 1647 aa21.64■■□□□ 1.06
SLC38A9-202ENST00000396865 WRNQ14191 1432 aaPredicted RBP eCLIP21.61■■□□□ 1.05
SLC38A9-202ENST00000396865 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
SLC38A9-202ENST00000396865 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
SLC38A9-202ENST00000396865 SOGA1O94964 1423 aa21.52■■□□□ 1.04
SLC38A9-202ENST00000396865 TNIKQ9UKE5 1360 aa21.47■■□□□ 1.03
SLC38A9-202ENST00000396865 CSRNP3Q8WYN3 585 aa21.45■■□□□ 1.03
SLC38A9-202ENST00000396865 SUPT16HQ9Y5B9 1047 aaKnown RBP21.44■■□□□ 1.02
SLC38A9-202ENST00000396865 RANGAP1P46060 587 aaPredicted RBP21.4■■□□□ 1.02
SLC38A9-202ENST00000396865 RUSC2Q8N2Y8 1516 aa21.39■■□□□ 1.02
SLC38A9-202ENST00000396865 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
SLC38A9-202ENST00000396865 EIF4G1Q04637 1599 aaKnown RBP21.34■■□□□ 1.01
SLC38A9-202ENST00000396865 TSHZ2Q9NRE2 1034 aa21.3■■□□□ 1
SLC38A9-202ENST00000396865 APLP2Q06481 763 aa21.28■■□□□ 1
SLC38A9-202ENST00000396865 ATAD2BQ9ULI0 1458 aa21.27■□□□□ 0.99
SLC38A9-202ENST00000396865 PEG3Q9GZU2 1588 aa21.25■□□□□ 0.99
SLC38A9-202ENST00000396865 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
SLC38A9-202ENST00000396865 ANP32EQ9BTT0 268 aa21.24■□□□□ 0.99
SLC38A9-202ENST00000396865 BCANQ96GW7 911 aa21.22■□□□□ 0.99
SLC38A9-202ENST00000396865 GOLGA3Q08378 1498 aa21.21■□□□□ 0.99
SLC38A9-202ENST00000396865 CLSPNQ9HAW4 1339 aa21.16■□□□□ 0.98
SLC38A9-202ENST00000396865 BAZ1BQ9UIG0 1483 aaKnown RBP21.16■□□□□ 0.98
SLC38A9-202ENST00000396865 EEA1Q15075 1411 aa21.15■□□□□ 0.98
SLC38A9-202ENST00000396865 BCL11AQ9H165 835 aa21.13■□□□□ 0.97
SLC38A9-202ENST00000396865 CLIP1P30622 1438 aa21.13■□□□□ 0.97
SLC38A9-202ENST00000396865 KCNH8Q96L42 1107 aa21.12■□□□□ 0.97
SLC38A9-202ENST00000396865 DHX57Q6P158 1386 aaKnown RBP21.03■□□□□ 0.96
SLC38A9-202ENST00000396865 VPS8Q8N3P4 1428 aa21.03■□□□□ 0.96
SLC38A9-202ENST00000396865 FKBP8Q14318 412 aa21■□□□□ 0.95
SLC38A9-202ENST00000396865 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
SLC38A9-202ENST00000396865 NCAPD3P42695 1498 aa20.98■□□□□ 0.95
SLC38A9-202ENST00000396865 ITGAEP38570 1179 aa20.97■□□□□ 0.95
SLC38A9-202ENST00000396865 CC2D2AQ9P2K1 1620 aa20.92■□□□□ 0.94
SLC38A9-202ENST00000396865 HMGXB3Q12766 1538 aa20.91■□□□□ 0.94
SLC38A9-202ENST00000396865 RAPGEF2Q9Y4G8 1499 aa20.89■□□□□ 0.94
SLC38A9-202ENST00000396865 KANK4Q5T7N3 995 aaPredicted RBP20.89■□□□□ 0.94
SLC38A9-202ENST00000396865 RBM19Q9Y4C8 960 aaKnown RBP20.84■□□□□ 0.93
SLC38A9-202ENST00000396865 DDX10Q13206 875 aaKnown RBP20.84■□□□□ 0.93
SLC38A9-202ENST00000396865 KIF21BO75037 1637 aa20.82■□□□□ 0.92
SLC38A9-202ENST00000396865 NEFLP07196 543 aa20.79■□□□□ 0.92
SLC38A9-202ENST00000396865 TRIM52Q96A61 297 aa20.79■□□□□ 0.92
SLC38A9-202ENST00000396865 SYNJ1O43426 1573 aa20.79■□□□□ 0.92
SLC38A9-202ENST00000396865 HIRIP3Q9BW71 556 aaPredicted RBP20.75■□□□□ 0.91
SLC38A9-202ENST00000396865 DNAJC5BQ9UF47 199 aa20.69■□□□□ 0.9
SLC38A9-202ENST00000396865 SIN3AQ96ST3 1273 aa20.65■□□□□ 0.9
SLC38A9-202ENST00000396865 MSH5O43196 834 aa20.63■□□□□ 0.89
SLC38A9-202ENST00000396865 CCNB3Q8WWL7 1395 aa20.61■□□□□ 0.89
SLC38A9-202ENST00000396865 CFTRP13569 1480 aa20.6■□□□□ 0.89
SLC38A9-202ENST00000396865 ARAP1Q96P48 1450 aa20.6■□□□□ 0.89
SLC38A9-202ENST00000396865 RAB3GAP2Q9H2M9 1393 aa20.59■□□□□ 0.89
SLC38A9-202ENST00000396865 IRX6P78412 446 aaPredicted RBP20.57■□□□□ 0.88
SLC38A9-202ENST00000396865 RRBP1Q9P2E9 1410 aaKnown RBP20.57■□□□□ 0.88
SLC38A9-202ENST00000396865 ANP32CO43423 234 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 246.2 ms