Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.59■□□□□ 0.57
COL15A1P39059 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.59■□□□□ 0.57
COL15A1P39059 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.59■□□□□ 0.57
COL15A1P39059 RN7SL81P-201ENST00000493781 261 ntBASIC18.59■□□□□ 0.57
COL15A1P39059 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC18.59■□□□□ 0.57
COL15A1P39059 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.59■□□□□ 0.57
COL15A1P39059 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.59■□□□□ 0.57
COL15A1P39059 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 AC025262.2-201ENST00000623975 1056 ntBASIC18.59■□□□□ 0.57
COL15A1P39059 AC073911.3-201ENST00000624401 631 ntBASIC18.59■□□□□ 0.57
COL15A1P39059 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.59■□□□□ 0.57
COL15A1P39059 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 TCAF2P1-201ENST00000291129 2421 ntBASIC18.59■□□□□ 0.57
COL15A1P39059 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
COL15A1P39059 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.59■□□□□ 0.57
COL15A1P39059 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COL15A1P39059 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.59■□□□□ 0.57
COL15A1P39059 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.59■□□□□ 0.57
COL15A1P39059 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
COL15A1P39059 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.59■□□□□ 0.57
COL15A1P39059 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL15A1P39059 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.58■□□□□ 0.57
COL15A1P39059 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.58■□□□□ 0.57
COL15A1P39059 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC18.58■□□□□ 0.57
COL15A1P39059 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL15A1P39059 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL15A1P39059 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
COL15A1P39059 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL15A1P39059 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL15A1P39059 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC18.58■□□□□ 0.57
COL15A1P39059 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
COL15A1P39059 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.58■□□□□ 0.57
COL15A1P39059 ORAOV1P1-201ENST00000503108 395 ntBASIC18.58■□□□□ 0.57
COL15A1P39059 MRPL22P1-201ENST00000505398 616 ntBASIC18.58■□□□□ 0.57
COL15A1P39059 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.58■□□□□ 0.57
COL15A1P39059 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC18.58■□□□□ 0.57
COL15A1P39059 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL15A1P39059 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.58■□□□□ 0.57
COL15A1P39059 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.58■□□□□ 0.57
COL15A1P39059 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
COL15A1P39059 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.58■□□□□ 0.57
COL15A1P39059 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL15A1P39059 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL15A1P39059 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.58■□□□□ 0.57
COL15A1P39059 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL15A1P39059 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.58■□□□□ 0.56
COL15A1P39059 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
COL15A1P39059 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.58■□□□□ 0.56
COL15A1P39059 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL15A1P39059 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.58■□□□□ 0.56
COL15A1P39059 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL15A1P39059 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL15A1P39059 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL15A1P39059 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL15A1P39059 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL15A1P39059 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL15A1P39059 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL15A1P39059 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL15A1P39059 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL15A1P39059 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL15A1P39059 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL15A1P39059 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.58■□□□□ 0.56
COL15A1P39059 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.57■□□□□ 0.56
COL15A1P39059 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC18.57■□□□□ 0.56
COL15A1P39059 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.57■□□□□ 0.56
COL15A1P39059 AC018463.1-201ENST00000456674 917 ntBASIC18.57■□□□□ 0.56
COL15A1P39059 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.57■□□□□ 0.56
COL15A1P39059 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.57■□□□□ 0.56
COL15A1P39059 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL15A1P39059 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.57■□□□□ 0.56
COL15A1P39059 AC087392.5-201ENST00000612517 489 ntBASIC18.57■□□□□ 0.56
COL15A1P39059 MIR6756-201ENST00000616240 63 ntBASIC18.57■□□□□ 0.56
COL15A1P39059 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COL15A1P39059 AL161773.1-201ENST00000624845 863 ntBASIC18.57■□□□□ 0.56
COL15A1P39059 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.57■□□□□ 0.56
COL15A1P39059 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
COL15A1P39059 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.57■□□□□ 0.56
COL15A1P39059 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms