RNA–Protein interactions for RNA: ENST00000415669.3

SAPCD1-208, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SAPCD1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-208ENST00000415669 NISCHQ9Y2I1 1504 aa34.45■■■■□ 3.1
SAPCD1-208ENST00000415669 CCDC180Q9P1Z9 1646 aa30.65■■■□□ 2.5
SAPCD1-208ENST00000415669 ABCC9O60706 1549 aa29.71■■■□□ 2.35
SAPCD1-208ENST00000415669 ZCCHC6Q5VYS8 1495 aaKnown RBP28.78■■■□□ 2.2
SAPCD1-208ENST00000415669 RB1CC1Q8TDY2 1594 aa28.7■■■□□ 2.18
SAPCD1-208ENST00000415669 NACADO15069 1562 aa28.68■■■□□ 2.18
SAPCD1-208ENST00000415669 DCAF8L2P0C7V8 631 aa28.64■■■□□ 2.18
SAPCD1-208ENST00000415669 MYO15BQ96JP2 1530 aa28.53■■■□□ 2.16
SAPCD1-208ENST00000415669 DCAF1Q9Y4B6 1507 aa28.5■■■□□ 2.15
SAPCD1-208ENST00000415669 UNC13AQ9UPW8 1703 aa28.18■■■□□ 2.1
SAPCD1-208ENST00000415669 SCRIBQ14160 1630 aa27.99■■■□□ 2.07
SAPCD1-208ENST00000415669 BICRAQ9NZM4 1560 aa27.8■■■□□ 2.04
SAPCD1-208ENST00000415669 PABPN1Q86U42 306 aaKnown RBP eCLIP27.71■■■□□ 2.03
SAPCD1-208ENST00000415669 SHROOM4Q9ULL8 1493 aa27.51■■□□□ 1.99
SAPCD1-208ENST00000415669 EIF4G1Q04637 1599 aaKnown RBP27.06■■□□□ 1.92
SAPCD1-208ENST00000415669 DNAJC5BQ9UF47 199 aa26.93■■□□□ 1.9
SAPCD1-208ENST00000415669 CC2D2AQ9P2K1 1620 aa26.92■■□□□ 1.9
SAPCD1-208ENST00000415669 CECR2Q9BXF3 1484 aa26.8■■□□□ 1.88
SAPCD1-208ENST00000415669 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
SAPCD1-208ENST00000415669 BAZ1AQ9NRL2 1556 aaPredicted RBP26.72■■□□□ 1.87
SAPCD1-208ENST00000415669 MROH2BQ7Z745 1585 aa26.57■■□□□ 1.84
SAPCD1-208ENST00000415669 SMARCA2P51531 1590 aa26.5■■□□□ 1.83
SAPCD1-208ENST00000415669 ATAD2BQ9ULI0 1458 aa26.47■■□□□ 1.83
SAPCD1-208ENST00000415669 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.82
SAPCD1-208ENST00000415669 NCAPD3P42695 1498 aa26.39■■□□□ 1.82
SAPCD1-208ENST00000415669 HMGXB3Q12766 1538 aa26.37■■□□□ 1.81
SAPCD1-208ENST00000415669 WIZO95785 1651 aa26.36■■□□□ 1.81
SAPCD1-208ENST00000415669 BAZ1BQ9UIG0 1483 aaKnown RBP26.31■■□□□ 1.8
SAPCD1-208ENST00000415669 RSF1Q96T23 1441 aaPredicted RBP26.29■■□□□ 1.8
SAPCD1-208ENST00000415669 TOP2AP11388 1531 aaKnown RBP26.07■■□□□ 1.76
SAPCD1-208ENST00000415669 SUPT5HO00267 1087 aaKnown RBP25.78■■□□□ 1.72
SAPCD1-208ENST00000415669 LAMC3Q9Y6N6 1575 aa25.76■■□□□ 1.71
SAPCD1-208ENST00000415669 NESP48681 1621 aa25.76■■□□□ 1.71
SAPCD1-208ENST00000415669 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
SAPCD1-208ENST00000415669 CADPSQ9ULU8 1353 aa25.63■■□□□ 1.69
SAPCD1-208ENST00000415669 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
SAPCD1-208ENST00000415669 PRDM2Q13029 1718 aa25.6■■□□□ 1.69
SAPCD1-208ENST00000415669 KIF21AQ7Z4S6 1674 aa25.59■■□□□ 1.69
SAPCD1-208ENST00000415669 CFTRP13569 1480 aa25.55■■□□□ 1.68
SAPCD1-208ENST00000415669 PDS5BQ9NTI5 1447 aa25.5■■□□□ 1.67
SAPCD1-208ENST00000415669 THOC2Q8NI27 1593 aaKnown RBP25.4■■□□□ 1.66
SAPCD1-208ENST00000415669 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
SAPCD1-208ENST00000415669 CEP164Q9UPV0 1460 aa25.38■■□□□ 1.65
SAPCD1-208ENST00000415669 MRC2Q9UBG0 1479 aa25.28■■□□□ 1.64
SAPCD1-208ENST00000415669 CUX2O14529 1486 aa25.22■■□□□ 1.63
SAPCD1-208ENST00000415669 WDR62O43379 1518 aa25.22■■□□□ 1.63
SAPCD1-208ENST00000415669 URB2Q14146 1524 aaKnown RBP25.14■■□□□ 1.62
SAPCD1-208ENST00000415669 DNMBPQ6XZF7 1577 aa25.05■■□□□ 1.6
SAPCD1-208ENST00000415669 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
SAPCD1-208ENST00000415669 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
SAPCD1-208ENST00000415669 CUX1P39880 1505 aa24.92■■□□□ 1.58
SAPCD1-208ENST00000415669 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.57
SAPCD1-208ENST00000415669 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.56
SAPCD1-208ENST00000415669 FGD5Q6ZNL6 1462 aa24.82■■□□□ 1.56
SAPCD1-208ENST00000415669 SYNJ1O43426 1573 aa24.81■■□□□ 1.56
SAPCD1-208ENST00000415669 WRNQ14191 1432 aaPredicted RBP eCLIP24.81■■□□□ 1.56
SAPCD1-208ENST00000415669 IFT140Q96RY7 1462 aa24.8■■□□□ 1.56
SAPCD1-208ENST00000415669 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
SAPCD1-208ENST00000415669 TARBP1Q13395 1621 aaKnown RBP24.77■■□□□ 1.56
SAPCD1-208ENST00000415669 WDR97A6NE52 1622 aa24.7■■□□□ 1.54
SAPCD1-208ENST00000415669 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.54
SAPCD1-208ENST00000415669 EIF4G3O43432 1585 aaKnown RBP24.69■■□□□ 1.54
SAPCD1-208ENST00000415669 SOGA1O94964 1423 aa24.68■■□□□ 1.54
SAPCD1-208ENST00000415669 ZNF608Q9ULD9 1512 aaPredicted RBP24.67■■□□□ 1.54
SAPCD1-208ENST00000415669 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
SAPCD1-208ENST00000415669 AQRO60306 1485 aaKnown RBP eCLIP24.53■■□□□ 1.52
SAPCD1-208ENST00000415669 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
SAPCD1-208ENST00000415669 ABCA5Q8WWZ7 1642 aa24.52■■□□□ 1.52
SAPCD1-208ENST00000415669 TDRD9Q8NDG6 1382 aaKnown RBP24.51■■□□□ 1.51
SAPCD1-208ENST00000415669 GAPVD1Q14C86 1478 aa24.43■■□□□ 1.5
SAPCD1-208ENST00000415669 GRIN2BQ13224 1484 aa24.39■■□□□ 1.5
SAPCD1-208ENST00000415669 CHD1O14646 1710 aa24.38■■□□□ 1.49
SAPCD1-208ENST00000415669 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
SAPCD1-208ENST00000415669 MAGI1Q96QZ7 1491 aaPredicted RBP24.33■■□□□ 1.49
SAPCD1-208ENST00000415669 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
SAPCD1-208ENST00000415669 ERICH3Q5RHP9 1530 aa24.29■■□□□ 1.48
SAPCD1-208ENST00000415669 ADAMTS12P58397 1594 aa24.28■■□□□ 1.48
SAPCD1-208ENST00000415669 KIF27Q86VH2 1401 aa24.27■■□□□ 1.48
SAPCD1-208ENST00000415669 SYNJ2O15056 1496 aa24.22■■□□□ 1.47
SAPCD1-208ENST00000415669 FBLN2P98095 1184 aa24.19■■□□□ 1.46
SAPCD1-208ENST00000415669 CUL7Q14999 1698 aa24.18■■□□□ 1.46
SAPCD1-208ENST00000415669 FHAD1B1AJZ9 1412 aa24.14■■□□□ 1.45
SAPCD1-208ENST00000415669 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
SAPCD1-208ENST00000415669 CHMP7Q8WUX9 453 aaPredicted RBP24.13■■□□□ 1.45
SAPCD1-208ENST00000415669 RUSC2Q8N2Y8 1516 aa24.12■■□□□ 1.45
SAPCD1-208ENST00000415669 OSCARQ8IYS5 282 aa24.12■■□□□ 1.45
SAPCD1-208ENST00000415669 GRIN2AQ12879 1464 aa24.11■■□□□ 1.45
SAPCD1-208ENST00000415669 DNAJC5Q9H3Z4 198 aa24.08■■□□□ 1.45
SAPCD1-208ENST00000415669 IGF1RP08069 1367 aa24.07■■□□□ 1.44
SAPCD1-208ENST00000415669 CEP170Q5SW79 1584 aa24.02■■□□□ 1.44
SAPCD1-208ENST00000415669 CLASP1Q7Z460 1538 aa24.01■■□□□ 1.43
SAPCD1-208ENST00000415669 CARMIL1Q5VZK9 1371 aa23.97■■□□□ 1.43
SAPCD1-208ENST00000415669 NUP160Q12769 1436 aa23.95■■□□□ 1.42
SAPCD1-208ENST00000415669 EEA1Q15075 1411 aa23.93■■□□□ 1.42
SAPCD1-208ENST00000415669 RAPGEF2Q9Y4G8 1499 aa23.89■■□□□ 1.42
SAPCD1-208ENST00000415669 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
SAPCD1-208ENST00000415669 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
SAPCD1-208ENST00000415669 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
SAPCD1-208ENST00000415669 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
SAPCD1-208ENST00000415669 PRXQ9BXM0 1461 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms