Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.05■□□□□ 0.321e-6■■■■□ 26.2
CSTF2TQ9H0L4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.021e-6■■■■□ 26.2
CSTF2TQ9H0L4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.181e-6■■■■□ 26.2
CSTF2TQ9H0L4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.31□□□□□ -0.281e-6■■■■□ 26.2
CSTF2TQ9H0L4 DEF8-205ENST00000561959 558 ntTSL 512.95□□□□□ -0.341e-6■■■■□ 26.2
CSTF2TQ9H0L4 DEF8-227ENST00000570182 3549 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.721e-6■■■■□ 26.2
CSTF2TQ9H0L4 DEF8-229ENST00000617948 3883 ntAPPRIS P4 TSL 5 BASIC10.41□□□□□ -0.741e-6■■■■□ 26.2
CSTF2TQ9H0L4 DEF8-201ENST00000268676 3725 ntTSL 2 BASIC10.32□□□□□ -0.761e-6■■■■□ 26.2
CSTF2TQ9H0L4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.532e-6■■■■□ 26.2
CSTF2TQ9H0L4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.12■□□□□ 0.332e-6■■■■□ 26.2
CSTF2TQ9H0L4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.322e-6■■■■□ 26.2
CSTF2TQ9H0L4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.232e-6■■■■□ 26.2
CSTF2TQ9H0L4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.232e-6■■■■□ 26.2
CSTF2TQ9H0L4 DTX2-207ENST00000435251 547 ntTSL 512.89□□□□□ -0.352e-6■■■■□ 26.2
CSTF2TQ9H0L4 DTX2-217ENST00000467729 496 ntTSL 58.87□□□□□ -0.992e-6■■■■□ 26.2
CSTF2TQ9H0L4 RPH3AL-217ENST00000575634 571 ntTSL 414.25□□□□□ -0.137e-7■■■■□ 26.2
CSTF2TQ9H0L4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.517e-7■■■■□ 26.2
CSTF2TQ9H0L4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.137e-7■■■■□ 26.2
CSTF2TQ9H0L4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.31■□□□□ 0.047e-7■■■■□ 26.2
CSTF2TQ9H0L4 MRFAP1-204ENST00000512914 1982 nt15.02■□□□□ -07e-7■■■■□ 26.2
CSTF2TQ9H0L4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.197e-7■■■■□ 26.2
CSTF2TQ9H0L4 RNF130-204ENST00000520911 1790 ntTSL 1 (best)25.82■■□□□ 1.728e-8■■■■□ 26.2
CSTF2TQ9H0L4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.85■■□□□ 1.578e-8■■■■□ 26.2
CSTF2TQ9H0L4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.448e-8■■■■□ 26.2
CSTF2TQ9H0L4 DSCAML1-202ENST00000525836 583 ntTSL 320.82■□□□□ 0.928e-8■■■■□ 26.2
CSTF2TQ9H0L4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.138e-8■■■■□ 26.2
CSTF2TQ9H0L4 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.318e-8■■■■□ 26.2
CSTF2TQ9H0L4 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.428e-8■■■■□ 26.2
CSTF2TQ9H0L4 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC11.98□□□□□ -0.498e-8■■■■□ 26.2
CSTF2TQ9H0L4 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC11.11□□□□□ -0.638e-8■■■■□ 26.2
CSTF2TQ9H0L4 USP19-204ENST00000398896 3907 ntAPPRIS ALT2 TSL 1 (best)10.5□□□□□ -0.738e-8■■■■□ 26.2
CSTF2TQ9H0L4 DSCAML1-201ENST00000321322 6899 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.748e-8■■■■□ 26.2
CSTF2TQ9H0L4 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.988e-8■■■■□ 26.2
CSTF2TQ9H0L4 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.058e-8■■■■□ 26.2
CSTF2TQ9H0L4 NEDD4L-221ENST00000588066 579 ntTSL 57.84□□□□□ -1.158e-8■■■■□ 26.2
CSTF2TQ9H0L4 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.59□□□□□ -1.198e-8■■■■□ 26.2
CSTF2TQ9H0L4 NEDD4L-222ENST00000588494 505 ntTSL 44.64□□□□□ -1.678e-8■■■■□ 26.2
CSTF2TQ9H0L4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.92■□□□□ 0.145e-8■■■■□ 26.2
CSTF2TQ9H0L4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.77■□□□□ 0.442e-7■■■■□ 26.1
CSTF2TQ9H0L4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.21■■■□□ 2.115e-7■■■■□ 26.1
CSTF2TQ9H0L4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.74■■□□□ 1.715e-7■■■■□ 26.1
CSTF2TQ9H0L4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.83■□□□□ 0.778e-11■■■■□ 26.1
CSTF2TQ9H0L4 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.118e-11■■■■□ 26.1
CSTF2TQ9H0L4 LINC00963-206ENST00000453213 469 ntTSL 38.23□□□□□ -1.092e-6■■■■□ 26.1
CSTF2TQ9H0L4 ABCA2-217ENST00000479446 6295 ntTSL 1 (best)18.58■□□□□ 0.563e-8■■■■□ 26.1
CSTF2TQ9H0L4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.453e-8■■■■□ 26.1
CSTF2TQ9H0L4 ABCA2-207ENST00000437791 697 ntTSL 517.19■□□□□ 0.343e-8■■■■□ 26.1
CSTF2TQ9H0L4 MFSD10-204ENST00000507272 1575 ntTSL 514.64□□□□□ -0.073e-8■■■■□ 26.1
CSTF2TQ9H0L4 ABCA2-209ENST00000463603 655 ntTSL 314.13□□□□□ -0.153e-8■■■■□ 26.1
CSTF2TQ9H0L4 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.283e-8■■■■□ 26.1
CSTF2TQ9H0L4 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.283e-8■■■■□ 26.1
CSTF2TQ9H0L4 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.443e-8■■■■□ 26.1
CSTF2TQ9H0L4 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.2□□□□□ -0.463e-8■■■■□ 26.1
CSTF2TQ9H0L4 ABCA2-218ENST00000487109 8031 ntTSL 1 (best)12.07□□□□□ -0.483e-8■■■■□ 26.1
CSTF2TQ9H0L4 ABCA2-208ENST00000459850 8073 ntTSL 1 (best)12.07□□□□□ -0.483e-8■■■■□ 26.1
CSTF2TQ9H0L4 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.842e-7■■■■□ 26.1
CSTF2TQ9H0L4 GNAS-AS1-204ENST00000631314 462 ntTSL 59.56□□□□□ -0.889e-7■■■■□ 26
CSTF2TQ9H0L4 KCNIP2-209ENST00000434163 534 ntTSL 1 (best)8.99□□□□□ -0.974e-8■■■■□ 26
CSTF2TQ9H0L4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.599e-8■■■■□ 26
CSTF2TQ9H0L4 LMO4-204ENST00000495705 565 ntTSL 318.6■□□□□ 0.579e-8■■■■□ 26
CSTF2TQ9H0L4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.32■■□□□ 1.326e-7■■■■□ 26
CSTF2TQ9H0L4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.31■□□□□ 0.366e-7■■■■□ 26
CSTF2TQ9H0L4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.27■□□□□ 0.518e-8■■■■□ 26
CSTF2TQ9H0L4 MBD3-210ENST00000592361 907 ntTSL 516.17■□□□□ 0.188e-8■■■■□ 26
CSTF2TQ9H0L4 VGLL4-205ENST00000417466 894 ntTSL 321.22■□□□□ 0.995e-10■■■■□ 26
CSTF2TQ9H0L4 VGLL4-204ENST00000417206 581 ntTSL 416.5■□□□□ 0.235e-10■■■■□ 26
CSTF2TQ9H0L4 VGLL4-212ENST00000437722 544 ntTSL 314.57□□□□□ -0.085e-10■■■■□ 26
CSTF2TQ9H0L4 VGLL4-209ENST00000424709 437 ntTSL 313.91□□□□□ -0.185e-10■■■■□ 26
CSTF2TQ9H0L4 VGLL4-207ENST00000419541 466 ntTSL 313.11□□□□□ -0.315e-10■■■■□ 26
CSTF2TQ9H0L4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.111e-6■■■■□ 26
CSTF2TQ9H0L4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.72■■■□□ 2.031e-8■■■■□ 26
CSTF2TQ9H0L4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.48■■□□□ 1.831e-8■■■■□ 26
CSTF2TQ9H0L4 CNN2-209ENST00000568865 1332 ntTSL 517.77■□□□□ 0.449e-8■■■■□ 26
CSTF2TQ9H0L4 CNN2-208ENST00000566695 828 ntTSL 211.43□□□□□ -0.589e-8■■■■□ 26
CSTF2TQ9H0L4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.89□□□□□ -0.191e-6■■■■□ 26
CSTF2TQ9H0L4 TSC1-205ENST00000475903 820 ntTSL 413.6□□□□□ -0.231e-6■■■■□ 26
CSTF2TQ9H0L4 TSC1-206ENST00000490179 681 ntTSL 313.58□□□□□ -0.241e-6■■■■□ 26
CSTF2TQ9H0L4 TSC1-207ENST00000493467 2219 ntTSL 1 (best)9□□□□□ -0.971e-6■■■■□ 26
CSTF2TQ9H0L4 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.21e-6■■■■□ 26
CSTF2TQ9H0L4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.371e-6■■■■□ 26
CSTF2TQ9H0L4 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.083e-7■■■■□ 26
CSTF2TQ9H0L4 RPS9-209ENST00000448962 2384 ntTSL 213.98□□□□□ -0.171e-7■■■■□ 26
CSTF2TQ9H0L4 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.378e-8■■■■□ 26
CSTF2TQ9H0L4 MAFF-205ENST00000441709 548 ntTSL 218.53■□□□□ 0.566e-7■■■■□ 26
CSTF2TQ9H0L4 MAFF-208ENST00000624676 3284 nt17.33■□□□□ 0.376e-7■■■■□ 26
CSTF2TQ9H0L4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.24■□□□□ 0.356e-7■■■■□ 26
CSTF2TQ9H0L4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.356e-7■■■■□ 26
CSTF2TQ9H0L4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.266e-7■■■■□ 26
CSTF2TQ9H0L4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.846e-7■■■■□ 25.9
CSTF2TQ9H0L4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.436e-7■■■■□ 25.9
CSTF2TQ9H0L4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.021e-6■■■■□ 25.9
CSTF2TQ9H0L4 KDM6B-206ENST00000575521 219 ntTSL 513.64□□□□□ -0.233e-10■■■■□ 25.9
CSTF2TQ9H0L4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.588e-10■■■■□ 25.9
CSTF2TQ9H0L4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.43■□□□□ 0.548e-10■■■■□ 25.9
CSTF2TQ9H0L4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.15■□□□□ 0.58e-10■■■■□ 25.9
CSTF2TQ9H0L4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.288e-10■■■■□ 25.9
CSTF2TQ9H0L4 CACNA1H-205ENST00000564954 607 ntTSL 29.9□□□□□ -0.822e-6■■■■□ 25.9
CSTF2TQ9H0L4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.622e-7■■■■□ 25.9
CSTF2TQ9H0L4 TAF4-207ENST00000608887 284 ntTSL 48.87□□□□□ -0.999e-8■■■■□ 25.9
CSTF2TQ9H0L4 RCC1-210ENST00000434290 1070 ntTSL 512.3□□□□□ -0.444e-55■■■■□ 25.9
Retrieved 100 of 19,151 protein–RNA pairs in 339.3 ms