RNA–Protein interactions for RNA: ENST00000435432.6

NEDD4L-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-207ENST00000435432 SLC24A1O60721 1099 aa15.99■□□□□ 0.15
NEDD4L-207ENST00000435432 NISCHQ9Y2I1 1504 aa15.62■□□□□ 0.09
NEDD4L-207ENST00000435432 EHMT2Q96KQ7 1210 aa14.7□□□□□ -0.06
NEDD4L-207ENST00000435432 PRKCSHP14314 528 aaPredicted RBP14.66□□□□□ -0.06
NEDD4L-207ENST00000435432 PLPPR3Q6T4P5 718 aa14.64□□□□□ -0.07
NEDD4L-207ENST00000435432 DAXXQ9UER7 740 aaPredicted RBP14.53□□□□□ -0.08
NEDD4L-207ENST00000435432 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
NEDD4L-207ENST00000435432 CCDC180Q9P1Z9 1646 aa14.32□□□□□ -0.12
NEDD4L-207ENST00000435432 APLP2Q06481 763 aa14.25□□□□□ -0.13
NEDD4L-207ENST00000435432 MYT1Q01538 1121 aa14.2□□□□□ -0.14
NEDD4L-207ENST00000435432 PELP1Q8IZL8 1130 aaKnown RBP14.09□□□□□ -0.15
NEDD4L-207ENST00000435432 TTBK1Q5TCY1 1321 aaPredicted RBP14.05□□□□□ -0.16
NEDD4L-207ENST00000435432 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
NEDD4L-207ENST00000435432 ERICH6Q7L0X2 663 aa14□□□□□ -0.17
NEDD4L-207ENST00000435432 TIMELESSQ9UNS1 1208 aa13.79□□□□□ -0.2
NEDD4L-207ENST00000435432 ABCC9O60706 1549 aa13.71□□□□□ -0.22
NEDD4L-207ENST00000435432 CHIC1Q5VXU3 224 aa13.7□□□□□ -0.22
NEDD4L-207ENST00000435432 SHROOM4Q9ULL8 1493 aa13.68□□□□□ -0.22
NEDD4L-207ENST00000435432 KCNA4P22459 653 aa13.63□□□□□ -0.23
NEDD4L-207ENST00000435432 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
NEDD4L-207ENST00000435432 RB1CC1Q8TDY2 1594 aa13.59□□□□□ -0.23
NEDD4L-207ENST00000435432 EIF5BO60841 1220 aaKnown RBP13.57□□□□□ -0.24
NEDD4L-207ENST00000435432 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
NEDD4L-207ENST00000435432 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.24
NEDD4L-207ENST00000435432 NACADO15069 1562 aa13.46□□□□□ -0.25
NEDD4L-207ENST00000435432 MYO15BQ96JP2 1530 aa13.46□□□□□ -0.26
NEDD4L-207ENST00000435432 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
NEDD4L-207ENST00000435432 ARXQ96QS3 562 aa13.44□□□□□ -0.26
NEDD4L-207ENST00000435432 CSRNP3Q8WYN3 585 aa13.37□□□□□ -0.27
NEDD4L-207ENST00000435432 RANGAP1P46060 587 aaPredicted RBP13.24□□□□□ -0.29
NEDD4L-207ENST00000435432 PODXL2Q9NZ53 605 aa13.23□□□□□ -0.29
NEDD4L-207ENST00000435432 TAOK2Q9UL54 1235 aa13.23□□□□□ -0.29
NEDD4L-207ENST00000435432 AEBP2Q6ZN18 517 aaPredicted RBP13.22□□□□□ -0.29
NEDD4L-207ENST00000435432 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
NEDD4L-207ENST00000435432 DNAJC5Q9H3Z4 198 aa13.18□□□□□ -0.3
NEDD4L-207ENST00000435432 BCL11AQ9H165 835 aa13.17□□□□□ -0.3
NEDD4L-207ENST00000435432 UNC13AQ9UPW8 1703 aa13.15□□□□□ -0.3
NEDD4L-207ENST00000435432 ZCCHC6Q5VYS8 1495 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-207ENST00000435432 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
NEDD4L-207ENST00000435432 HOMEZQ8IX15 550 aa13.08□□□□□ -0.32
NEDD4L-207ENST00000435432 BICRAQ9NZM4 1560 aa13.02□□□□□ -0.32
NEDD4L-207ENST00000435432 CUX2O14529 1486 aa13.01□□□□□ -0.33
NEDD4L-207ENST00000435432 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
NEDD4L-207ENST00000435432 DCAF1Q9Y4B6 1507 aa12.96□□□□□ -0.33
NEDD4L-207ENST00000435432 NPM2Q86SE8 214 aaKnown RBP12.83□□□□□ -0.36
NEDD4L-207ENST00000435432 CC2D2AQ9P2K1 1620 aa12.82□□□□□ -0.36
NEDD4L-207ENST00000435432 GTF3C3Q9Y5Q9 886 aa12.81□□□□□ -0.36
NEDD4L-207ENST00000435432 C14orf37Q86TY3 774 aa12.79□□□□□ -0.36
NEDD4L-207ENST00000435432 LOC105371045A0A1W2PR82 267 aa12.78□□□□□ -0.36
NEDD4L-207ENST00000435432 BCANQ96GW7 911 aa12.77□□□□□ -0.36
NEDD4L-207ENST00000435432 PHF23Q9BUL5 403 aaPredicted RBP12.77□□□□□ -0.37
NEDD4L-207ENST00000435432 CECR2Q9BXF3 1484 aa12.75□□□□□ -0.37
NEDD4L-207ENST00000435432 DCAF8L2P0C7V8 631 aa12.71□□□□□ -0.38
NEDD4L-207ENST00000435432 EIF4G1Q04637 1599 aaKnown RBP12.71□□□□□ -0.38
NEDD4L-207ENST00000435432 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
NEDD4L-207ENST00000435432 TRIM26Q12899 539 aaPredicted RBP12.66□□□□□ -0.38
NEDD4L-207ENST00000435432 SUPT5HO00267 1087 aaKnown RBP12.6□□□□□ -0.39
NEDD4L-207ENST00000435432 PLCB2Q00722 1185 aa12.6□□□□□ -0.39
NEDD4L-207ENST00000435432 PDIA4P13667 645 aaKnown RBP12.59□□□□□ -0.39
NEDD4L-207ENST00000435432 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
NEDD4L-207ENST00000435432 DHX37Q8IY37 1157 aaKnown RBP12.52□□□□□ -0.4
NEDD4L-207ENST00000435432 UBTFP17480 764 aaKnown RBP12.5□□□□□ -0.41
NEDD4L-207ENST00000435432 CHMP4AQ9BY43 222 aa12.5□□□□□ -0.41
NEDD4L-207ENST00000435432 TMEM132AQ24JP5 1023 aa12.49□□□□□ -0.41
NEDD4L-207ENST00000435432 HRCP23327 699 aa12.49□□□□□ -0.41
NEDD4L-207ENST00000435432 PPP6R1Q9UPN7 881 aa12.42□□□□□ -0.42
NEDD4L-207ENST00000435432 UBE2Q2Q8WVN8 375 aa12.41□□□□□ -0.42
NEDD4L-207ENST00000435432 PDE4CQ08493 712 aa12.39□□□□□ -0.43
NEDD4L-207ENST00000435432 SAMD1Q6SPF0 538 aaPredicted RBP12.36□□□□□ -0.43
NEDD4L-207ENST00000435432 SLC4A1APQ9BWU0 796 aaKnown RBP12.36□□□□□ -0.43
NEDD4L-207ENST00000435432 THOC2Q8NI27 1593 aaKnown RBP12.31□□□□□ -0.44
NEDD4L-207ENST00000435432 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
NEDD4L-207ENST00000435432 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
NEDD4L-207ENST00000435432 FBLN2P98095 1184 aa12.27□□□□□ -0.45
NEDD4L-207ENST00000435432 CFAP44Q96MT7 982 aa12.25□□□□□ -0.45
NEDD4L-207ENST00000435432 BCL11BQ9C0K0 894 aaPredicted RBP12.25□□□□□ -0.45
NEDD4L-207ENST00000435432 SMARCA2P51531 1590 aa12.24□□□□□ -0.45
NEDD4L-207ENST00000435432 FBXO3Q9UK99 471 aa12.23□□□□□ -0.45
NEDD4L-207ENST00000435432 PKNOX2Q96KN3 472 aa12.23□□□□□ -0.45
NEDD4L-207ENST00000435432 ZBTB22O15209 634 aa12.23□□□□□ -0.45
NEDD4L-207ENST00000435432 IGSF3O75054 1194 aa12.23□□□□□ -0.45
NEDD4L-207ENST00000435432 NCAPD3P42695 1498 aa12.22□□□□□ -0.45
NEDD4L-207ENST00000435432 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
NEDD4L-207ENST00000435432 PABPN1Q86U42 306 aaKnown RBP eCLIP12.19□□□□□ -0.461e-13■■□□□ 13
NEDD4L-207ENST00000435432 ANO8Q9HCE9 1232 aaPredicted RBP12.14□□□□□ -0.47
NEDD4L-207ENST00000435432 CCDC136Q96JN2 1154 aa12.12□□□□□ -0.47
NEDD4L-207ENST00000435432 PEG3Q9GZU2 1588 aa12.11□□□□□ -0.47
NEDD4L-207ENST00000435432 IRX6P78412 446 aaPredicted RBP12.09□□□□□ -0.47
NEDD4L-207ENST00000435432 ERCC6Q03468 1493 aa12.08□□□□□ -0.48
NEDD4L-207ENST00000435432 MROH2BQ7Z745 1585 aa12.07□□□□□ -0.48
NEDD4L-207ENST00000435432 SMARCA4P51532 1647 aa12.06□□□□□ -0.48
NEDD4L-207ENST00000435432 BAZ1AQ9NRL2 1556 aaPredicted RBP12.06□□□□□ -0.48
NEDD4L-207ENST00000435432 BRD2P25440 801 aaKnown RBP12.05□□□□□ -0.48
NEDD4L-207ENST00000435432 CDK11BP21127 795 aaKnown RBP12.05□□□□□ -0.48
NEDD4L-207ENST00000435432 CDK11AQ9UQ88 783 aaPredicted RBP12.05□□□□□ -0.48
NEDD4L-207ENST00000435432 NEFLP07196 543 aa12.04□□□□□ -0.48
NEDD4L-207ENST00000435432 RSF1Q96T23 1441 aaPredicted RBP12.04□□□□□ -0.48
NEDD4L-207ENST00000435432 TAF7LQ5H9L4 462 aa12.04□□□□□ -0.48
NEDD4L-207ENST00000435432 CNKSR2Q8WXI2 1034 aa12.03□□□□□ -0.48
NEDD4L-207ENST00000435432 WDR62O43379 1518 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms