RNA–Protein interactions for RNA: ENST00000424709.5

VGLL4-209, Transcript of vestigial like family member 4, humanhuman

TSL 3

Gene VGLL4, Length 437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-209ENST00000424709 NISCHQ9Y2I1 1504 aa36.24■■■■□ 3.39
VGLL4-209ENST00000424709 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
VGLL4-209ENST00000424709 ABCC9O60706 1549 aa31.65■■■□□ 2.66
VGLL4-209ENST00000424709 RB1CC1Q8TDY2 1594 aa30.41■■■□□ 2.46
VGLL4-209ENST00000424709 NACADO15069 1562 aa30.33■■■□□ 2.45
VGLL4-209ENST00000424709 DCAF8L2P0C7V8 631 aa30.28■■■□□ 2.44
VGLL4-209ENST00000424709 ZCCHC6Q5VYS8 1495 aaKnown RBP30.21■■■□□ 2.43
VGLL4-209ENST00000424709 MYO15BQ96JP2 1530 aa30.12■■■□□ 2.41
VGLL4-209ENST00000424709 DCAF1Q9Y4B6 1507 aa29.97■■■□□ 2.39
VGLL4-209ENST00000424709 UNC13AQ9UPW8 1703 aa29.89■■■□□ 2.38
VGLL4-209ENST00000424709 BICRAQ9NZM4 1560 aa29.58■■■□□ 2.33
VGLL4-209ENST00000424709 SCRIBQ14160 1630 aa29.5■■■□□ 2.31
VGLL4-209ENST00000424709 PABPN1Q86U42 306 aaKnown RBP eCLIP29.48■■■□□ 2.31
VGLL4-209ENST00000424709 SHROOM4Q9ULL8 1493 aa29.16■■■□□ 2.26
VGLL4-209ENST00000424709 DNAJC5BQ9UF47 199 aa29.09■■■□□ 2.25
VGLL4-209ENST00000424709 EIF4G1Q04637 1599 aaKnown RBP28.76■■■□□ 2.19
VGLL4-209ENST00000424709 CC2D2AQ9P2K1 1620 aa28.67■■■□□ 2.18
VGLL4-209ENST00000424709 CECR2Q9BXF3 1484 aa28.42■■■□□ 2.14
VGLL4-209ENST00000424709 SMARCA4P51532 1647 aa28.2■■■□□ 2.1
VGLL4-209ENST00000424709 BAZ1AQ9NRL2 1556 aaPredicted RBP28.09■■■□□ 2.09
VGLL4-209ENST00000424709 ATAD2BQ9ULI0 1458 aa28■■■□□ 2.07
VGLL4-209ENST00000424709 MROH2BQ7Z745 1585 aa27.97■■■□□ 2.07
VGLL4-209ENST00000424709 NCAPD3P42695 1498 aa27.95■■■□□ 2.07
VGLL4-209ENST00000424709 SMARCA2P51531 1590 aa27.95■■■□□ 2.07
VGLL4-209ENST00000424709 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
VGLL4-209ENST00000424709 HMGXB3Q12766 1538 aa27.89■■■□□ 2.06
VGLL4-209ENST00000424709 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.03
VGLL4-209ENST00000424709 WIZO95785 1651 aa27.69■■■□□ 2.02
VGLL4-209ENST00000424709 RSF1Q96T23 1441 aaPredicted RBP27.6■■■□□ 2.01
VGLL4-209ENST00000424709 NESP48681 1621 aa27.4■■□□□ 1.98
VGLL4-209ENST00000424709 TOP2AP11388 1531 aaKnown RBP27.36■■□□□ 1.97
VGLL4-209ENST00000424709 LAMC3Q9Y6N6 1575 aa27.29■■□□□ 1.96
VGLL4-209ENST00000424709 ERCC6Q03468 1493 aa27.24■■□□□ 1.95
VGLL4-209ENST00000424709 KIF21AQ7Z4S6 1674 aa27.15■■□□□ 1.94
VGLL4-209ENST00000424709 CADPSQ9ULU8 1353 aa27.11■■□□□ 1.93
VGLL4-209ENST00000424709 THOC2Q8NI27 1593 aaKnown RBP27.07■■□□□ 1.92
VGLL4-209ENST00000424709 PDS5BQ9NTI5 1447 aa27.01■■□□□ 1.91
VGLL4-209ENST00000424709 CCDC88BA6NC98 1476 aa27■■□□□ 1.91
VGLL4-209ENST00000424709 CUX2O14529 1486 aa27■■□□□ 1.91
VGLL4-209ENST00000424709 SUPT5HO00267 1087 aaKnown RBP26.98■■□□□ 1.91
VGLL4-209ENST00000424709 CFTRP13569 1480 aa26.98■■□□□ 1.91
VGLL4-209ENST00000424709 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
VGLL4-209ENST00000424709 FANCD2Q9BXW9 1451 aa26.86■■□□□ 1.89
VGLL4-209ENST00000424709 CEP164Q9UPV0 1460 aa26.83■■□□□ 1.89
VGLL4-209ENST00000424709 MRC2Q9UBG0 1479 aa26.82■■□□□ 1.88
VGLL4-209ENST00000424709 WDR62O43379 1518 aa26.79■■□□□ 1.88
VGLL4-209ENST00000424709 URB2Q14146 1524 aaKnown RBP26.65■■□□□ 1.86
VGLL4-209ENST00000424709 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
VGLL4-209ENST00000424709 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
VGLL4-209ENST00000424709 ABCC8Q09428 1581 aa26.36■■□□□ 1.81
VGLL4-209ENST00000424709 IFT140Q96RY7 1462 aa26.25■■□□□ 1.79
VGLL4-209ENST00000424709 CUX1P39880 1505 aa26.24■■□□□ 1.79
VGLL4-209ENST00000424709 POLA1P09884 1462 aaPredicted RBP26.22■■□□□ 1.79
VGLL4-209ENST00000424709 TARBP1Q13395 1621 aaKnown RBP26.21■■□□□ 1.79
VGLL4-209ENST00000424709 ZNF608Q9ULD9 1512 aaPredicted RBP26.21■■□□□ 1.79
VGLL4-209ENST00000424709 DNAJC5Q9H3Z4 198 aa26.19■■□□□ 1.78
VGLL4-209ENST00000424709 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
VGLL4-209ENST00000424709 FGD5Q6ZNL6 1462 aa26.14■■□□□ 1.78
VGLL4-209ENST00000424709 RAD54L2Q9Y4B4 1467 aa26.1■■□□□ 1.77
VGLL4-209ENST00000424709 WDR97A6NE52 1622 aa26.06■■□□□ 1.76
VGLL4-209ENST00000424709 SOGA1O94964 1423 aa26.05■■□□□ 1.76
VGLL4-209ENST00000424709 BIVM-ERCC5R4GMW8 1640 aa26.03■■□□□ 1.76
VGLL4-209ENST00000424709 WRNQ14191 1432 aaPredicted RBP eCLIP26.02■■□□□ 1.76
VGLL4-209ENST00000424709 SYNJ1O43426 1573 aa26.02■■□□□ 1.76
VGLL4-209ENST00000424709 AQRO60306 1485 aaKnown RBP eCLIP25.99■■□□□ 1.753e-7■■■■■ 32.1
VGLL4-209ENST00000424709 TOP2BQ02880 1626 aa25.99■■□□□ 1.75
VGLL4-209ENST00000424709 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
VGLL4-209ENST00000424709 CHD1O14646 1710 aa25.87■■□□□ 1.73
VGLL4-209ENST00000424709 ABCA10Q8WWZ4 1543 aa25.87■■□□□ 1.73
VGLL4-209ENST00000424709 ABCA5Q8WWZ7 1642 aa25.86■■□□□ 1.73
VGLL4-209ENST00000424709 PBRM1Q86U86 1689 aa25.85■■□□□ 1.73
VGLL4-209ENST00000424709 SNAPC4Q5SXM2 1469 aa25.8■■□□□ 1.72
VGLL4-209ENST00000424709 GRIN2BQ13224 1484 aa25.76■■□□□ 1.71
VGLL4-209ENST00000424709 GAPVD1Q14C86 1478 aa25.76■■□□□ 1.71
VGLL4-209ENST00000424709 OSCARQ8IYS5 282 aa25.73■■□□□ 1.71
VGLL4-209ENST00000424709 MAGI1Q96QZ7 1491 aaPredicted RBP25.72■■□□□ 1.71
VGLL4-209ENST00000424709 SYNJ2O15056 1496 aa25.62■■□□□ 1.69
VGLL4-209ENST00000424709 ADAMTS12P58397 1594 aa25.61■■□□□ 1.69
VGLL4-209ENST00000424709 FBLN2P98095 1184 aa25.61■■□□□ 1.69
VGLL4-209ENST00000424709 CHMP7Q8WUX9 453 aaPredicted RBP25.56■■□□□ 1.68
VGLL4-209ENST00000424709 RIMBP3CA6NJZ7 1639 aa25.55■■□□□ 1.68
VGLL4-209ENST00000424709 RIMBP3BA6NNM3 1639 aa25.55■■□□□ 1.68
VGLL4-209ENST00000424709 RIMBP3Q9UFD9 1639 aa25.55■■□□□ 1.68
VGLL4-209ENST00000424709 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
VGLL4-209ENST00000424709 CLASP1Q7Z460 1538 aa25.54■■□□□ 1.68
VGLL4-209ENST00000424709 ARHGEF11O15085 1522 aa25.5■■□□□ 1.67
VGLL4-209ENST00000424709 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
VGLL4-209ENST00000424709 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
VGLL4-209ENST00000424709 KIF27Q86VH2 1401 aa25.46■■□□□ 1.67
VGLL4-209ENST00000424709 FHAD1B1AJZ9 1412 aa25.45■■□□□ 1.66
VGLL4-209ENST00000424709 CEP170Q5SW79 1584 aa25.42■■□□□ 1.66
VGLL4-209ENST00000424709 IGF1RP08069 1367 aa25.4■■□□□ 1.66
VGLL4-209ENST00000424709 NUP160Q12769 1436 aa25.36■■□□□ 1.65
VGLL4-209ENST00000424709 CUL7Q14999 1698 aa25.35■■□□□ 1.65
VGLL4-209ENST00000424709 ARAP1Q96P48 1450 aa25.31■■□□□ 1.64
VGLL4-209ENST00000424709 RUSC2Q8N2Y8 1516 aa25.28■■□□□ 1.64
VGLL4-209ENST00000424709 SHROOM2Q13796 1616 aa25.25■■□□□ 1.63
VGLL4-209ENST00000424709 CARMIL1Q5VZK9 1371 aa25.23■■□□□ 1.63
VGLL4-209ENST00000424709 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
VGLL4-209ENST00000424709 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms