RNA–Protein interactions for RNA: ENST00000463603.5

ABCA2-209, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 3

Gene ABCA2, Length 655 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-209ENST00000463603 NISCHQ9Y2I1 1504 aa36.74■■■■□ 3.47
ABCA2-209ENST00000463603 CCDC180Q9P1Z9 1646 aa32.7■■■□□ 2.83
ABCA2-209ENST00000463603 ABCC9O60706 1549 aa31.98■■■□□ 2.71
ABCA2-209ENST00000463603 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
ABCA2-209ENST00000463603 DCAF8L2P0C7V8 631 aa30.75■■■□□ 2.51
ABCA2-209ENST00000463603 NACADO15069 1562 aa30.75■■■□□ 2.51
ABCA2-209ENST00000463603 ZCCHC6Q5VYS8 1495 aaKnown RBP30.57■■■□□ 2.48
ABCA2-209ENST00000463603 MYO15BQ96JP2 1530 aa30.54■■■□□ 2.48
ABCA2-209ENST00000463603 DCAF1Q9Y4B6 1507 aa30.4■■■□□ 2.46
ABCA2-209ENST00000463603 UNC13AQ9UPW8 1703 aa30.15■■■□□ 2.42
ABCA2-209ENST00000463603 PABPN1Q86U42 306 aaKnown RBP eCLIP29.89■■■□□ 2.38
ABCA2-209ENST00000463603 BICRAQ9NZM4 1560 aa29.82■■■□□ 2.36
ABCA2-209ENST00000463603 SCRIBQ14160 1630 aa29.81■■■□□ 2.36
ABCA2-209ENST00000463603 DNAJC5BQ9UF47 199 aa29.68■■■□□ 2.34
ABCA2-209ENST00000463603 SHROOM4Q9ULL8 1493 aa29.51■■■□□ 2.31
ABCA2-209ENST00000463603 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
ABCA2-209ENST00000463603 CC2D2AQ9P2K1 1620 aa28.96■■■□□ 2.23
ABCA2-209ENST00000463603 CECR2Q9BXF3 1484 aa28.77■■■□□ 2.2
ABCA2-209ENST00000463603 SMARCA4P51532 1647 aa28.52■■■□□ 2.16
ABCA2-209ENST00000463603 BAZ1AQ9NRL2 1556 aaPredicted RBP28.49■■■□□ 2.15
ABCA2-209ENST00000463603 ATAD2BQ9ULI0 1458 aa28.35■■■□□ 2.13
ABCA2-209ENST00000463603 NCAPD3P42695 1498 aa28.34■■■□□ 2.13
ABCA2-209ENST00000463603 SMARCA2P51531 1590 aa28.34■■■□□ 2.13
ABCA2-209ENST00000463603 MROH2BQ7Z745 1585 aa28.29■■■□□ 2.12
ABCA2-209ENST00000463603 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
ABCA2-209ENST00000463603 HMGXB3Q12766 1538 aa28.21■■■□□ 2.11
ABCA2-209ENST00000463603 BAZ1BQ9UIG0 1483 aaKnown RBP28.13■■■□□ 2.09
ABCA2-209ENST00000463603 WIZO95785 1651 aa28.03■■■□□ 2.08
ABCA2-209ENST00000463603 RSF1Q96T23 1441 aaPredicted RBP27.96■■■□□ 2.07
ABCA2-209ENST00000463603 TOP2AP11388 1531 aaKnown RBP27.7■■■□□ 2.02
ABCA2-209ENST00000463603 NESP48681 1621 aa27.66■■■□□ 2.02
ABCA2-209ENST00000463603 LAMC3Q9Y6N6 1575 aa27.63■■■□□ 2.01
ABCA2-209ENST00000463603 ERCC6Q03468 1493 aa27.63■■■□□ 2.01
ABCA2-209ENST00000463603 CADPSQ9ULU8 1353 aa27.53■■■□□ 2
ABCA2-209ENST00000463603 CUX2O14529 1486 aa27.52■■■□□ 2
ABCA2-209ENST00000463603 PDS5BQ9NTI5 1447 aa27.44■■□□□ 1.98
ABCA2-209ENST00000463603 KIF21AQ7Z4S6 1674 aa27.4■■□□□ 1.98
ABCA2-209ENST00000463603 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
ABCA2-209ENST00000463603 CFTRP13569 1480 aa27.35■■□□□ 1.97
ABCA2-209ENST00000463603 SUPT5HO00267 1087 aaKnown RBP27.27■■□□□ 1.96
ABCA2-209ENST00000463603 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.95
ABCA2-209ENST00000463603 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
ABCA2-209ENST00000463603 DNAJC5Q9H3Z4 198 aa27.23■■□□□ 1.95
ABCA2-209ENST00000463603 FANCD2Q9BXW9 1451 aa27.2■■□□□ 1.95
ABCA2-209ENST00000463603 CEP164Q9UPV0 1460 aa27.18■■□□□ 1.94
ABCA2-209ENST00000463603 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
ABCA2-209ENST00000463603 WDR62O43379 1518 aa27.05■■□□□ 1.92
ABCA2-209ENST00000463603 URB2Q14146 1524 aaKnown RBP26.92■■□□□ 1.9
ABCA2-209ENST00000463603 ABCC8Q09428 1581 aa26.81■■□□□ 1.88
ABCA2-209ENST00000463603 TOPBP1Q92547 1522 aa26.77■■□□□ 1.88
ABCA2-209ENST00000463603 DNMBPQ6XZF7 1577 aa26.74■■□□□ 1.87
ABCA2-209ENST00000463603 IFT140Q96RY7 1462 aa26.61■■□□□ 1.85
ABCA2-209ENST00000463603 CUX1P39880 1505 aa26.55■■□□□ 1.84
ABCA2-209ENST00000463603 POLA1P09884 1462 aaPredicted RBP26.53■■□□□ 1.84
ABCA2-209ENST00000463603 TARBP1Q13395 1621 aaKnown RBP26.48■■□□□ 1.83
ABCA2-209ENST00000463603 ZNF608Q9ULD9 1512 aaPredicted RBP26.47■■□□□ 1.83
ABCA2-209ENST00000463603 FGD5Q6ZNL6 1462 aa26.47■■□□□ 1.83
ABCA2-209ENST00000463603 SOGA1O94964 1423 aa26.45■■□□□ 1.82
ABCA2-209ENST00000463603 RAD54L2Q9Y4B4 1467 aa26.42■■□□□ 1.82
ABCA2-209ENST00000463603 EIF4G3O43432 1585 aaKnown RBP26.38■■□□□ 1.81
ABCA2-209ENST00000463603 WRNQ14191 1432 aaPredicted RBP eCLIP26.38■■□□□ 1.81
ABCA2-209ENST00000463603 BIVM-ERCC5R4GMW8 1640 aa26.35■■□□□ 1.81
ABCA2-209ENST00000463603 AQRO60306 1485 aaKnown RBP eCLIP26.34■■□□□ 1.811e-12■■■■■ 65.3
ABCA2-209ENST00000463603 TOP2BQ02880 1626 aa26.33■■□□□ 1.81
ABCA2-209ENST00000463603 SYNJ1O43426 1573 aa26.3■■□□□ 1.8
ABCA2-209ENST00000463603 WDR97A6NE52 1622 aa26.3■■□□□ 1.8
ABCA2-209ENST00000463603 TDRD9Q8NDG6 1382 aaKnown RBP26.28■■□□□ 1.8
ABCA2-209ENST00000463603 ABCA10Q8WWZ4 1543 aa26.22■■□□□ 1.79
ABCA2-209ENST00000463603 OSCARQ8IYS5 282 aa26.21■■□□□ 1.79
ABCA2-209ENST00000463603 GAPVD1Q14C86 1478 aa26.14■■□□□ 1.78
ABCA2-209ENST00000463603 GRIN2BQ13224 1484 aa26.13■■□□□ 1.77
ABCA2-209ENST00000463603 TRIM41Q8WV44 630 aa26.13■■□□□ 1.77
ABCA2-209ENST00000463603 PBRM1Q86U86 1689 aa26.12■■□□□ 1.77
ABCA2-209ENST00000463603 ABCA5Q8WWZ7 1642 aa26.11■■□□□ 1.77
ABCA2-209ENST00000463603 CHD1O14646 1710 aa26.11■■□□□ 1.77
ABCA2-209ENST00000463603 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.77
ABCA2-209ENST00000463603 MAGI1Q96QZ7 1491 aaPredicted RBP26.07■■□□□ 1.76
ABCA2-209ENST00000463603 FBLN2P98095 1184 aa26.06■■□□□ 1.76
ABCA2-209ENST00000463603 CHMP7Q8WUX9 453 aaPredicted RBP25.99■■□□□ 1.75
ABCA2-209ENST00000463603 SYNJ2O15056 1496 aa25.96■■□□□ 1.75
ABCA2-209ENST00000463603 ERICH3Q5RHP9 1530 aa25.92■■□□□ 1.74
ABCA2-209ENST00000463603 RIMBP3CA6NJZ7 1639 aa25.91■■□□□ 1.74
ABCA2-209ENST00000463603 RIMBP3BA6NNM3 1639 aa25.91■■□□□ 1.74
ABCA2-209ENST00000463603 RIMBP3Q9UFD9 1639 aa25.91■■□□□ 1.74
ABCA2-209ENST00000463603 KIF27Q86VH2 1401 aa25.85■■□□□ 1.73
ABCA2-209ENST00000463603 ADAMTS12P58397 1594 aa25.85■■□□□ 1.73
ABCA2-209ENST00000463603 ARHGEF11O15085 1522 aa25.84■■□□□ 1.73
ABCA2-209ENST00000463603 FHAD1B1AJZ9 1412 aa25.83■■□□□ 1.73
ABCA2-209ENST00000463603 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
ABCA2-209ENST00000463603 CLASP1Q7Z460 1538 aa25.76■■□□□ 1.71
ABCA2-209ENST00000463603 IGF1RP08069 1367 aa25.73■■□□□ 1.71
ABCA2-209ENST00000463603 CUL7Q14999 1698 aa25.7■■□□□ 1.7
ABCA2-209ENST00000463603 NUP160Q12769 1436 aa25.67■■□□□ 1.7
ABCA2-209ENST00000463603 CEP170Q5SW79 1584 aa25.65■■□□□ 1.7
ABCA2-209ENST00000463603 CARMIL1Q5VZK9 1371 aa25.6■■□□□ 1.69
ABCA2-209ENST00000463603 RUSC2Q8N2Y8 1516 aa25.58■■□□□ 1.68
ABCA2-209ENST00000463603 CYB5RLQ6IPT4 315 aa25.57■■□□□ 1.68
ABCA2-209ENST00000463603 ARAP1Q96P48 1450 aa25.57■■□□□ 1.68
ABCA2-209ENST00000463603 SHROOM2Q13796 1616 aa25.49■■□□□ 1.67
ABCA2-209ENST00000463603 JPH4Q96JJ6 628 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms