RNA–Protein interactions for RNA: ENST00000617948.4

DEF8-229, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

APPRIS P4 TSL 5 BASIC

Gene DEF8, Length 3,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-229ENST00000617948 NISCHQ9Y2I1 1504 aa22.51■■□□□ 1.19
DEF8-229ENST00000617948 DCAF8L2P0C7V8 631 aa21.2■□□□□ 0.98
DEF8-229ENST00000617948 SHROOM4Q9ULL8 1493 aa20.22■□□□□ 0.83
DEF8-229ENST00000617948 SUPT5HO00267 1087 aaKnown RBP19.82■□□□□ 0.76
DEF8-229ENST00000617948 ABCC9O60706 1549 aa19.47■□□□□ 0.71
DEF8-229ENST00000617948 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
DEF8-229ENST00000617948 EHMT2Q96KQ7 1210 aa18.88■□□□□ 0.61
DEF8-229ENST00000617948 CCDC180Q9P1Z9 1646 aa18.81■□□□□ 0.6
DEF8-229ENST00000617948 ZCCHC6Q5VYS8 1495 aaKnown RBP18.68■□□□□ 0.58
DEF8-229ENST00000617948 FAM9AQ8IZU1 332 aaPredicted RBP18.58■□□□□ 0.56
DEF8-229ENST00000617948 SCRIBQ14160 1630 aa18.47■□□□□ 0.55
DEF8-229ENST00000617948 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
DEF8-229ENST00000617948 RANGAP1P46060 587 aaPredicted RBP18.17■□□□□ 0.5
DEF8-229ENST00000617948 RB1CC1Q8TDY2 1594 aa18.11■□□□□ 0.49
DEF8-229ENST00000617948 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
DEF8-229ENST00000617948 NACADO15069 1562 aa18.04■□□□□ 0.48
DEF8-229ENST00000617948 TTBK1Q5TCY1 1321 aaPredicted RBP18.01■□□□□ 0.47
DEF8-229ENST00000617948 LOC105371045A0A1W2PR82 267 aa17.96■□□□□ 0.46
DEF8-229ENST00000617948 DCAF1Q9Y4B6 1507 aa17.9■□□□□ 0.46
DEF8-229ENST00000617948 CECR2Q9BXF3 1484 aa17.89■□□□□ 0.45
DEF8-229ENST00000617948 UBTFP17480 764 aaKnown RBP17.84■□□□□ 0.45
DEF8-229ENST00000617948 RSF1Q96T23 1441 aaPredicted RBP17.79■□□□□ 0.44
DEF8-229ENST00000617948 PPARGC1BQ86YN6 1023 aaKnown RBP17.77■□□□□ 0.43
DEF8-229ENST00000617948 PCGF6Q9BYE7 350 aa17.67■□□□□ 0.42
DEF8-229ENST00000617948 ATP1B4Q9UN42 357 aaPredicted RBP17.66■□□□□ 0.42
DEF8-229ENST00000617948 MROH2BQ7Z745 1585 aa17.58■□□□□ 0.4
DEF8-229ENST00000617948 APLP2Q06481 763 aa17.56■□□□□ 0.4
DEF8-229ENST00000617948 MYO15BQ96JP2 1530 aa17.55■□□□□ 0.4
DEF8-229ENST00000617948 BAZ1AQ9NRL2 1556 aaPredicted RBP17.43■□□□□ 0.38
DEF8-229ENST00000617948 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
DEF8-229ENST00000617948 HRCP23327 699 aa17.38■□□□□ 0.37
DEF8-229ENST00000617948 FBLN2P98095 1184 aa17.36■□□□□ 0.37
DEF8-229ENST00000617948 WIZO95785 1651 aa17.34■□□□□ 0.37
DEF8-229ENST00000617948 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
DEF8-229ENST00000617948 P3H3Q8IVL6 736 aa17.23■□□□□ 0.35
DEF8-229ENST00000617948 CCDC88BA6NC98 1476 aa17.22■□□□□ 0.35
DEF8-229ENST00000617948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
DEF8-229ENST00000617948 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
DEF8-229ENST00000617948 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
DEF8-229ENST00000617948 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
DEF8-229ENST00000617948 ITGAEP38570 1179 aa17.15■□□□□ 0.34
DEF8-229ENST00000617948 SMARCA4P51532 1647 aa17.14■□□□□ 0.33
DEF8-229ENST00000617948 ARID3CA6NKF2 412 aa17.14■□□□□ 0.33
DEF8-229ENST00000617948 BICRAQ9NZM4 1560 aa17.09■□□□□ 0.33
DEF8-229ENST00000617948 WRNQ14191 1432 aaPredicted RBP eCLIP17.07■□□□□ 0.32
DEF8-229ENST00000617948 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
DEF8-229ENST00000617948 SMARCA2P51531 1590 aa17.04■□□□□ 0.32
DEF8-229ENST00000617948 EIF4G1Q04637 1599 aaKnown RBP17.01■□□□□ 0.31
DEF8-229ENST00000617948 TOP2AP11388 1531 aaKnown RBP16.98■□□□□ 0.31
DEF8-229ENST00000617948 CCER1Q8TC90 406 aaPredicted RBP16.96■□□□□ 0.3
DEF8-229ENST00000617948 SOGA1O94964 1423 aa16.95■□□□□ 0.3
DEF8-229ENST00000617948 TRIM26Q12899 539 aaPredicted RBP16.95■□□□□ 0.3
DEF8-229ENST00000617948 UNC13AQ9UPW8 1703 aa16.93■□□□□ 0.3
DEF8-229ENST00000617948 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
DEF8-229ENST00000617948 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.29
DEF8-229ENST00000617948 CHMP7Q8WUX9 453 aaPredicted RBP16.83■□□□□ 0.29
DEF8-229ENST00000617948 NCAPD3P42695 1498 aa16.82■□□□□ 0.28
DEF8-229ENST00000617948 TDRD9Q8NDG6 1382 aaKnown RBP16.82■□□□□ 0.28
DEF8-229ENST00000617948 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
DEF8-229ENST00000617948 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
DEF8-229ENST00000617948 NESP48681 1621 aa16.79■□□□□ 0.28
DEF8-229ENST00000617948 MYT1LQ9UL68 1186 aa16.76■□□□□ 0.27
DEF8-229ENST00000617948 ZEB1P37275 1124 aaPredicted RBP16.75■□□□□ 0.27
DEF8-229ENST00000617948 RUSC2Q8N2Y8 1516 aa16.75■□□□□ 0.27
DEF8-229ENST00000617948 CUX2O14529 1486 aa16.75■□□□□ 0.27
DEF8-229ENST00000617948 PDS5BQ9NTI5 1447 aa16.73■□□□□ 0.27
DEF8-229ENST00000617948 KIF27Q86VH2 1401 aa16.72■□□□□ 0.27
DEF8-229ENST00000617948 FANCD2Q9BXW9 1451 aa16.68■□□□□ 0.26
DEF8-229ENST00000617948 CLIP1P30622 1438 aa16.64■□□□□ 0.25
DEF8-229ENST00000617948 CEP162Q5TB80 1403 aa16.62■□□□□ 0.25
DEF8-229ENST00000617948 CARMIL1Q5VZK9 1371 aa16.62■□□□□ 0.25
DEF8-229ENST00000617948 ZNF777Q9ULD5 760 aaPredicted RBP16.6■□□□□ 0.25
DEF8-229ENST00000617948 CEP164Q9UPV0 1460 aa16.59■□□□□ 0.25
DEF8-229ENST00000617948 GOLGA3Q08378 1498 aa16.58■□□□□ 0.24
DEF8-229ENST00000617948 RAD54L2Q9Y4B4 1467 aa16.57■□□□□ 0.24
DEF8-229ENST00000617948 EEA1Q15075 1411 aa16.56■□□□□ 0.24
DEF8-229ENST00000617948 CFTRP13569 1480 aa16.52■□□□□ 0.24
DEF8-229ENST00000617948 TNIKQ9UKE5 1360 aa16.5■□□□□ 0.23
DEF8-229ENST00000617948 HMGXB3Q12766 1538 aa16.48■□□□□ 0.23
DEF8-229ENST00000617948 FGD5Q6ZNL6 1462 aa16.48■□□□□ 0.23
DEF8-229ENST00000617948 RAPGEF2Q9Y4G8 1499 aa16.47■□□□□ 0.23
DEF8-229ENST00000617948 KCNH8Q96L42 1107 aa16.46■□□□□ 0.23
DEF8-229ENST00000617948 TRIM52Q96A61 297 aa16.45■□□□□ 0.22
DEF8-229ENST00000617948 CHIC2Q9UKJ5 165 aa16.45■□□□□ 0.22
DEF8-229ENST00000617948 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
DEF8-229ENST00000617948 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.221e-6■■■■■ 38.7
DEF8-229ENST00000617948 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
DEF8-229ENST00000617948 NEUROD1Q13562 356 aa16.41■□□□□ 0.22
DEF8-229ENST00000617948 IGF1RP08069 1367 aa16.39■□□□□ 0.21
DEF8-229ENST00000617948 CDK11AQ9UQ88 783 aaPredicted RBP16.38■□□□□ 0.21
DEF8-229ENST00000617948 MTUS2Q5JR59 1369 aa16.37■□□□□ 0.21
DEF8-229ENST00000617948 PELP1Q8IZL8 1130 aaKnown RBP16.37■□□□□ 0.21
DEF8-229ENST00000617948 KANK4Q5T7N3 995 aaPredicted RBP16.36■□□□□ 0.21
DEF8-229ENST00000617948 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
DEF8-229ENST00000617948 CUX1P39880 1505 aa16.34■□□□□ 0.21
DEF8-229ENST00000617948 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.21
DEF8-229ENST00000617948 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
DEF8-229ENST00000617948 CENPBP07199 599 aaPredicted RBP16.32■□□□□ 0.2
DEF8-229ENST00000617948 CNGB1Q14028 1251 aaPredicted RBP16.3■□□□□ 0.2
DEF8-229ENST00000617948 GAPVD1Q14C86 1478 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms